RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 PUS7LQ9H0K6 701 aaKnown RBP21.28■■□□□ 1
RAB39A-201ENST00000320578 TNS1Q9HBL0 1735 aaKnown RBP21.27■■□□□ 1
RAB39A-201ENST00000320578 IDH1O75874 414 aaKnown RBP21.27■■□□□ 1
RAB39A-201ENST00000320578 DDR1Q08345 913 aa21.27■■□□□ 1
RAB39A-201ENST00000320578 TMED8Q6PL24 325 aaPredicted RBP21.27■■□□□ 1
RAB39A-201ENST00000320578 CLEC17AQ6ZS10 378 aa21.27■■□□□ 1
RAB39A-201ENST00000320578 CCDC24Q8N4L8 307 aa21.27■■□□□ 1
RAB39A-201ENST00000320578 FAM84BQ96KN1 310 aaPredicted RBP21.27■■□□□ 1
RAB39A-201ENST00000320578 NEK1Q96PY6 1258 aa21.27■■□□□ 1
RAB39A-201ENST00000320578 DENND2AQ9ULE3 1009 aa21.27■■□□□ 1
RAB39A-201ENST00000320578 LEMD3Q9Y2U8 911 aa21.27■■□□□ 1
RAB39A-201ENST00000320578 GPAA1O43292 621 aa21.27■□□□□ 0.99
RAB39A-201ENST00000320578 FRAT2O75474 233 aaPredicted RBP21.27■□□□□ 0.99
RAB39A-201ENST00000320578 FOXD4L1Q9NU39 408 aa21.27■□□□□ 0.99
RAB39A-201ENST00000320578 DOCK2Q92608 1830 aa21.26■□□□□ 0.99
RAB39A-201ENST00000320578 C15orf52Q6ZUT6 534 aaKnown RBP21.26■□□□□ 0.99
RAB39A-201ENST00000320578 COL23A1Q86Y22 540 aaPredicted RBP21.26■□□□□ 0.99
RAB39A-201ENST00000320578 RPGRQ92834 1020 aaKnown RBP21.26■□□□□ 0.99
RAB39A-201ENST00000320578 RBM17Q96I25 401 aaKnown RBP21.26■□□□□ 0.99
RAB39A-201ENST00000320578 ZNF532Q9HCE3 1301 aa21.26■□□□□ 0.99
RAB39A-201ENST00000320578 CRAMP1Q96RY5 1269 aa21.25■□□□□ 0.99
RAB39A-201ENST00000320578 FOXP2O15409 715 aa21.25■□□□□ 0.99
RAB39A-201ENST00000320578 BBOX1O75936 387 aa21.25■□□□□ 0.99
RAB39A-201ENST00000320578 TMC4Q7Z404 712 aa21.25■□□□□ 0.99
RAB39A-201ENST00000320578 ZGPATQ8N5A5 531 aaKnown RBP21.25■□□□□ 0.99
RAB39A-201ENST00000320578 WWC3Q9ULE0 1092 aa21.25■□□□□ 0.99
RAB39A-201ENST00000320578 ZMYM6O95789 1325 aa21.24■□□□□ 0.99
RAB39A-201ENST00000320578 IRS2Q9Y4H2 1338 aa21.24■□□□□ 0.99
RAB39A-201ENST00000320578 TAF1P21675 1872 aa21.24■□□□□ 0.99
RAB39A-201ENST00000320578 GYG1P46976 350 aa21.24■□□□□ 0.99
RAB39A-201ENST00000320578 ALX1Q15699 326 aa21.24■□□□□ 0.99
RAB39A-201ENST00000320578 VPS37DQ86XT2 251 aa21.24■□□□□ 0.99
RAB39A-201ENST00000320578 TNPO1Q92973 898 aaKnown RBP21.24■□□□□ 0.99
RAB39A-201ENST00000320578 TAF6LQ9Y6J9 622 aa21.24■□□□□ 0.99
RAB39A-201ENST00000320578 CPA1P15085 419 aa21.23■□□□□ 0.99
RAB39A-201ENST00000320578 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.23■□□□□ 0.99
RAB39A-201ENST00000320578 XDHP47989 1333 aa21.23■□□□□ 0.99
RAB39A-201ENST00000320578 HIBADHP31937 336 aaKnown RBP21.22■□□□□ 0.99
RAB39A-201ENST00000320578 MCM4P33991 863 aa21.22■□□□□ 0.99
RAB39A-201ENST00000320578 IMMTQ16891 758 aaKnown RBP21.22■□□□□ 0.99
RAB39A-201ENST00000320578 BRIP1Q9BX63 1249 aa21.22■□□□□ 0.99
RAB39A-201ENST00000320578 NRXN2Q9P2S2 1712 aa21.22■□□□□ 0.99
RAB39A-201ENST00000320578 FGAP02671 866 aa21.22■□□□□ 0.99
RAB39A-201ENST00000320578 FBXL16Q8N461 479 aa21.22■□□□□ 0.99
RAB39A-201ENST00000320578 GBP4Q96PP9 640 aa21.22■□□□□ 0.99
RAB39A-201ENST00000320578 STRBPQ96SI9 672 aaKnown RBP21.22■□□□□ 0.99
RAB39A-201ENST00000320578 PNPLA7Q6ZV29 1317 aa21.22■□□□□ 0.99
RAB39A-201ENST00000320578 GNAT2P19087 354 aa21.21■□□□□ 0.99
RAB39A-201ENST00000320578 DHX32Q7L7V1 743 aaKnown RBP21.21■□□□□ 0.99
RAB39A-201ENST00000320578 MAGEB6Q8N7X4 407 aa21.21■□□□□ 0.99
RAB39A-201ENST00000320578 E7EWF7 191 aa21.2■□□□□ 0.98
RAB39A-201ENST00000320578 STOX1Q6ZVD7 989 aa21.2■□□□□ 0.98
RAB39A-201ENST00000320578 AIDAQ96BJ3 306 aa21.2■□□□□ 0.98
RAB39A-201ENST00000320578 LRP2BPQ9P2M1 347 aa21.2■□□□□ 0.98
RAB39A-201ENST00000320578 EP400Q96L91 3159 aa21.2■□□□□ 0.98
RAB39A-201ENST00000320578 PTMSP20962 102 aa21.2■□□□□ 0.98
RAB39A-201ENST00000320578 EXOSC10Q01780 885 aaKnown RBP21.2■□□□□ 0.98
RAB39A-201ENST00000320578 NOL8Q76FK4 1167 aaKnown RBP21.2■□□□□ 0.98
RAB39A-201ENST00000320578 CAMKK2Q96RR4 588 aa21.2■□□□□ 0.98
RAB39A-201ENST00000320578 AGXT2Q9BYV1 514 aa21.2■□□□□ 0.98
RAB39A-201ENST00000320578 DDX11L8A8MPP1 907 aa21.19■□□□□ 0.98
RAB39A-201ENST00000320578 PATL2C9JE40 543 aaKnown RBP21.19■□□□□ 0.98
RAB39A-201ENST00000320578 PDIA4P13667 645 aaKnown RBP21.19■□□□□ 0.98
RAB39A-201ENST00000320578 TOB2Q14106 344 aaPredicted RBP21.19■□□□□ 0.98
RAB39A-201ENST00000320578 PODXL2Q9NZ53 605 aa21.19■□□□□ 0.98
RAB39A-201ENST00000320578 COL1A1P02452 1464 aaPredicted RBP21.18■□□□□ 0.98
RAB39A-201ENST00000320578 WTIPA6NIX2 430 aaPredicted RBP21.18■□□□□ 0.98
RAB39A-201ENST00000320578 ATP2B4P23634 1241 aa21.18■□□□□ 0.98
RAB39A-201ENST00000320578 ANKIB1Q9P2G1 1089 aa21.18■□□□□ 0.98
RAB39A-201ENST00000320578 ME3Q16798 604 aa21.18■□□□□ 0.98
RAB39A-201ENST00000320578 TPCN1Q9ULQ1 816 aa21.18■□□□□ 0.98
RAB39A-201ENST00000320578 WDR19Q8NEZ3 1342 aa21.17■□□□□ 0.98
RAB39A-201ENST00000320578 ZNF213O14771 459 aa21.17■□□□□ 0.98
RAB39A-201ENST00000320578 SALL1Q9NSC2 1324 aa21.16■□□□□ 0.98
RAB39A-201ENST00000320578 BRD1O95696 1058 aa21.16■□□□□ 0.98
RAB39A-201ENST00000320578 TTLL5Q6EMB2 1281 aa21.16■□□□□ 0.98
RAB39A-201ENST00000320578 PARP3Q9Y6F1 533 aa21.16■□□□□ 0.98
RAB39A-201ENST00000320578 MYO5AQ9Y4I1 1855 aaKnown RBP21.15■□□□□ 0.98
RAB39A-201ENST00000320578 KLRK1P26718 216 aa21.15■□□□□ 0.98
RAB39A-201ENST00000320578 PDE6BP35913 854 aa21.15■□□□□ 0.98
RAB39A-201ENST00000320578 SP8Q8IXZ3 490 aa21.15■□□□□ 0.98
RAB39A-201ENST00000320578 MBD4O95243 580 aa21.15■□□□□ 0.98
RAB39A-201ENST00000320578 LARGE1O95461 756 aa21.15■□□□□ 0.98
RAB39A-201ENST00000320578 NPR1P16066 1061 aa21.15■□□□□ 0.98
RAB39A-201ENST00000320578 COL9A3Q14050 684 aaPredicted RBP21.15■□□□□ 0.98
RAB39A-201ENST00000320578 SLC15A2Q16348 729 aa21.15■□□□□ 0.98
RAB39A-201ENST00000320578 Q6ZUG5 572 aa21.15■□□□□ 0.98
RAB39A-201ENST00000320578 TDRD7Q8NHU6 1098 aaKnown RBP21.15■□□□□ 0.98
RAB39A-201ENST00000320578 CHMP4CQ96CF2 233 aa21.15■□□□□ 0.98
RAB39A-201ENST00000320578 IQSEC3Q9UPP2 1182 aaPredicted RBP21.15■□□□□ 0.98
RAB39A-201ENST00000320578 ZDHHC9Q9Y397 364 aa21.15■□□□□ 0.98
RAB39A-201ENST00000320578 CYP7A1P22680 504 aa21.14■□□□□ 0.97
RAB39A-201ENST00000320578 GPSM2P81274 684 aa21.14■□□□□ 0.97
RAB39A-201ENST00000320578 SPTY2D1Q68D10 685 aaPredicted RBP21.14■□□□□ 0.97
RAB39A-201ENST00000320578 ZNF804AQ7Z570 1209 aa21.14■□□□□ 0.97
RAB39A-201ENST00000320578 RAI14Q9P0K7 980 aa21.14■□□□□ 0.97
RAB39A-201ENST00000320578 ABCF2Q9UG63 623 aa21.14■□□□□ 0.97
RAB39A-201ENST00000320578 SMC3Q9UQE7 1217 aa21.14■□□□□ 0.97
RAB39A-201ENST00000320578 MMP10P09238 476 aa21.13■□□□□ 0.97
RAB39A-201ENST00000320578 SRGNP10124 158 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms