RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 RFX7Q2KHR2 1363 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 ESPNB1AK53 854 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 SLC27A2O14975 620 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 ANKRD1Q15327 319 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 ADCK5Q3MIX3 580 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 XAGE2Q96GT9 111 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 HAUS7Q99871 368 aa16.86■□□□□ 0.29
VRK3-201ENST00000316763 BSDC1Q9NW68 430 aaPredicted RBP16.86■□□□□ 0.29
VRK3-201ENST00000316763 C10orf71Q711Q0 1435 aa16.85■□□□□ 0.29
VRK3-201ENST00000316763 TCHHQ07283 1943 aa16.85■□□□□ 0.29
VRK3-201ENST00000316763 A0A0D9SFI3 127 aa16.85■□□□□ 0.29
VRK3-201ENST00000316763 CPA1P15085 419 aa16.85■□□□□ 0.29
VRK3-201ENST00000316763 FGFR2P21802 821 aa16.85■□□□□ 0.29
VRK3-201ENST00000316763 PDE6BP35913 854 aa16.85■□□□□ 0.29
VRK3-201ENST00000316763 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
VRK3-201ENST00000316763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.85■□□□□ 0.29
VRK3-201ENST00000316763 MED23Q9ULK4 1368 aa16.85■□□□□ 0.29
VRK3-201ENST00000316763 SYT1P21579 422 aa16.84■□□□□ 0.29
VRK3-201ENST00000316763 ADORA1P30542 326 aa16.84■□□□□ 0.29
VRK3-201ENST00000316763 PUM3Q15397 648 aaKnown RBP16.84■□□□□ 0.29
VRK3-201ENST00000316763 CRY2Q49AN0 593 aa16.84■□□□□ 0.29
VRK3-201ENST00000316763 TMEM87AQ8NBN3 555 aa16.84■□□□□ 0.29
VRK3-201ENST00000316763 CSPP1Q1MSJ5 1256 aa16.84■□□□□ 0.29
VRK3-201ENST00000316763 BLOC1S2Q6QNY1 142 aa16.84■□□□□ 0.29
VRK3-201ENST00000316763 USP48Q86UV5 1035 aa16.84■□□□□ 0.29
VRK3-201ENST00000316763 CCDC83Q8IWF9 413 aa16.84■□□□□ 0.29
VRK3-201ENST00000316763 LPIN2Q92539 896 aa16.84■□□□□ 0.29
VRK3-201ENST00000316763 LARP6Q9BRS8 491 aaKnown RBP16.84■□□□□ 0.29
VRK3-201ENST00000316763 RBSNQ9H1K0 784 aa16.84■□□□□ 0.29
VRK3-201ENST00000316763 COL11A2P13942 1736 aaPredicted RBP16.83■□□□□ 0.28
VRK3-201ENST00000316763 SYCE3A1L190 88 aa16.83■□□□□ 0.28
VRK3-201ENST00000316763 GJB2P29033 226 aa16.83■□□□□ 0.28
VRK3-201ENST00000316763 CELF1Q92879 486 aaKnown RBP16.83■□□□□ 0.28
VRK3-201ENST00000316763 ALDH8A1Q9H2A2 487 aaPredicted RBP16.83■□□□□ 0.28
VRK3-201ENST00000316763 PPP1R1BQ9UD71 204 aaPredicted RBP16.83■□□□□ 0.28
VRK3-201ENST00000316763 NSFL1CQ9UNZ2 370 aaKnown RBP16.83■□□□□ 0.28
VRK3-201ENST00000316763 F13A1P00488 732 aa16.82■□□□□ 0.28
VRK3-201ENST00000316763 SRGNP10124 158 aa16.82■□□□□ 0.28
VRK3-201ENST00000316763 CHRNA5P30532 468 aa16.82■□□□□ 0.28
VRK3-201ENST00000316763 RPS8P62241 208 aaKnown RBP16.82■□□□□ 0.28
VRK3-201ENST00000316763 CHRNDQ07001 517 aa16.82■□□□□ 0.28
VRK3-201ENST00000316763 KRT32Q14532 448 aa16.82■□□□□ 0.28
VRK3-201ENST00000316763 TSGA10IPQ3SY00 556 aa16.82■□□□□ 0.28
VRK3-201ENST00000316763 FOXD4L6Q3SYB3 417 aaPredicted RBP16.82■□□□□ 0.28
VRK3-201ENST00000316763 CCDC158Q5M9N0 1113 aa16.82■□□□□ 0.28
VRK3-201ENST00000316763 FOXD4L3Q6VB84 417 aaPredicted RBP16.82■□□□□ 0.28
VRK3-201ENST00000316763 C2CD5Q86YS7 1000 aa16.82■□□□□ 0.28
VRK3-201ENST00000316763 HELBQ8NG08 1087 aaPredicted RBP16.82■□□□□ 0.28
VRK3-201ENST00000316763 ZNF512BQ96KM6 892 aaPredicted RBP16.82■□□□□ 0.28
VRK3-201ENST00000316763 H0YIN7 160 aa16.82■□□□□ 0.28
VRK3-201ENST00000316763 LARGE1O95461 756 aa16.82■□□□□ 0.28
VRK3-201ENST00000316763 KLHL34Q8N239 644 aa16.82■□□□□ 0.28
VRK3-201ENST00000316763 RPGRQ92834 1020 aaKnown RBP16.82■□□□□ 0.28
VRK3-201ENST00000316763 GORABQ5T7V8 394 aa16.81■□□□□ 0.28
VRK3-201ENST00000316763 DDX46Q7L014 1031 aaKnown RBP16.81■□□□□ 0.28
VRK3-201ENST00000316763 TICAM2Q86XR7 235 aa16.81■□□□□ 0.28
VRK3-201ENST00000316763 CD2APQ9Y5K6 639 aa16.81■□□□□ 0.28
VRK3-201ENST00000316763 TAF5LO75529 589 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 NPR1P16066 1061 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 HOXA10P31260 410 aaPredicted RBP16.8■□□□□ 0.28
VRK3-201ENST00000316763 EDC3Q96F86 508 aaKnown RBP16.8■□□□□ 0.28
VRK3-201ENST00000316763 MINPP1Q9UNW1 487 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 SPEF2Q9C093 1822 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 A0A0G2JLW4 131 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 LETM1O95202 739 aaPredicted RBP16.8■□□□□ 0.28
VRK3-201ENST00000316763 IFIT1P09914 478 aaKnown RBP16.8■□□□□ 0.28
VRK3-201ENST00000316763 SLC5A1P13866 664 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 RPS6KB1P23443 525 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 ME3Q16798 604 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 TTC39AQ5SRH9 613 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 MASTLQ96GX5 879 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 RBM17Q96I25 401 aaKnown RBP16.8■□□□□ 0.28
VRK3-201ENST00000316763 DNAJC2Q99543 621 aaKnown RBP16.8■□□□□ 0.28
VRK3-201ENST00000316763 TSPY26PQ9H489 355 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 GDPD2Q9HCC8 539 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 U3KPZ7 1027 aaPredicted RBP16.8■□□□□ 0.28
VRK3-201ENST00000316763 KIAA1551Q9HCM1 1747 aa16.8■□□□□ 0.28
VRK3-201ENST00000316763 CACNA1SQ13698 1873 aa16.79■□□□□ 0.28
VRK3-201ENST00000316763 DPEP1P16444 411 aa16.79■□□□□ 0.28
VRK3-201ENST00000316763 PDCP20941 246 aa16.79■□□□□ 0.28
VRK3-201ENST00000316763 TGFB2P61812 414 aa16.79■□□□□ 0.28
VRK3-201ENST00000316763 UBE2HP62256 183 aa16.79■□□□□ 0.28
VRK3-201ENST00000316763 HS1BP3Q53T59 392 aa16.79■□□□□ 0.28
VRK3-201ENST00000316763 ZNF589Q86UQ0 364 aaPredicted RBP16.79■□□□□ 0.28
VRK3-201ENST00000316763 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.28
VRK3-201ENST00000316763 PAG1Q9NWQ8 432 aa16.79■□□□□ 0.28
VRK3-201ENST00000316763 CNPY2Q9Y2B0 182 aa16.79■□□□□ 0.28
VRK3-201ENST00000316763 NDUFB9Q9Y6M9 179 aa16.79■□□□□ 0.28
VRK3-201ENST00000316763 DLEC1Q9Y238 1755 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 GADD45BO75293 160 aaPredicted RBP16.78■□□□□ 0.28
VRK3-201ENST00000316763 KCNA3P22001 575 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 MCMDC2Q4G0Z9 681 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 KBTBD3Q8NAB2 608 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 CRAMP1Q96RY5 1269 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 TPCN1Q9ULQ1 816 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 SNAP23O00161 211 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 ARID4AP29374 1257 aaPredicted RBP16.78■□□□□ 0.28
VRK3-201ENST00000316763 GRAPQ13588 217 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 SCARF1Q14162 830 aa16.78■□□□□ 0.28
VRK3-201ENST00000316763 CCDC102BQ68D86 513 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms