RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 ECHDC1Q9NTX5 307 aa17.8■□□□□ 0.44
PPM1E-201ENST00000308249 SPAG1Q07617 926 aa17.8■□□□□ 0.44
PPM1E-201ENST00000308249 OGFOD1Q8N543 542 aa17.8■□□□□ 0.44
PPM1E-201ENST00000308249 RAB3IPQ96QF0 476 aaPredicted RBP17.8■□□□□ 0.44
PPM1E-201ENST00000308249 NACA2Q9H009 215 aa17.8■□□□□ 0.44
PPM1E-201ENST00000308249 MAN1A1P33908 653 aa17.8■□□□□ 0.44
PPM1E-201ENST00000308249 NOLC1Q14978 699 aaKnown RBP eCLIP17.8■□□□□ 0.44
PPM1E-201ENST00000308249 LMNTD2Q8IXW0 634 aa17.8■□□□□ 0.44
PPM1E-201ENST00000308249 NBPF6Q5VWK0 638 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 NBPF5PQ86XG9 351 aaPredicted RBP17.79■□□□□ 0.44
PPM1E-201ENST00000308249 NBPF4Q96M43 638 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 TBC1D2Q9BYX2 928 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 KRT79Q5XKE5 535 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 KCNH5Q8NCM2 988 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 NOD1Q9Y239 953 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 TNNC1P63316 161 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 GPR161Q8N6U8 529 aaKnown RBP17.79■□□□□ 0.44
PPM1E-201ENST00000308249 SPOPO43791 374 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 BUB1BO60566 1050 aaPredicted RBP17.79■□□□□ 0.44
PPM1E-201ENST00000308249 UVSSAQ2YD98 709 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 PPP1R42Q7Z4L9 355 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 BANK1Q8NDB2 785 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 MCUR1Q96AQ8 359 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 KRT23Q9C075 422 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 ZSCAN16Q9H4T2 348 aaPredicted RBP17.79■□□□□ 0.44
PPM1E-201ENST00000308249 UBE3BQ7Z3V4 1068 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 FRMD4BQ9Y2L6 1034 aa17.79■□□□□ 0.44
PPM1E-201ENST00000308249 EXOC5O00471 708 aa17.78■□□□□ 0.44
PPM1E-201ENST00000308249 STX10O60499 249 aa17.78■□□□□ 0.44
PPM1E-201ENST00000308249 GINS2Q9Y248 185 aa17.78■□□□□ 0.44
PPM1E-201ENST00000308249 SMIM24O75264 130 aa17.78■□□□□ 0.44
PPM1E-201ENST00000308249 GBP1P32455 592 aa17.78■□□□□ 0.44
PPM1E-201ENST00000308249 ARFGAP2Q8N6H7 521 aa17.78■□□□□ 0.44
PPM1E-201ENST00000308249 ESR2Q92731 530 aa17.77■□□□□ 0.44
PPM1E-201ENST00000308249 FNBP1Q96RU3 617 aa17.77■□□□□ 0.44
PPM1E-201ENST00000308249 MYOM3Q5VTT5 1437 aa17.77■□□□□ 0.44
PPM1E-201ENST00000308249 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.44
PPM1E-201ENST00000308249 IFT74Q96LB3 600 aa17.77■□□□□ 0.44
PPM1E-201ENST00000308249 B4DLN1 442 aa17.77■□□□□ 0.44
PPM1E-201ENST00000308249 PPP1R12AO14974 1030 aaPredicted RBP17.77■□□□□ 0.44
PPM1E-201ENST00000308249 MRPL12P52815 198 aaKnown RBP17.77■□□□□ 0.44
PPM1E-201ENST00000308249 SLC8A3P57103 927 aa17.77■□□□□ 0.44
PPM1E-201ENST00000308249 AFAP1L2Q8N4X5 818 aa17.77■□□□□ 0.44
PPM1E-201ENST00000308249 ANKRD24Q8TF21 1146 aa17.77■□□□□ 0.44
PPM1E-201ENST00000308249 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
PPM1E-201ENST00000308249 WDR44Q5JSH3 913 aa17.77■□□□□ 0.43
PPM1E-201ENST00000308249 MRPS27Q92552 414 aaKnown RBP17.77■□□□□ 0.43
PPM1E-201ENST00000308249 CETN3O15182 167 aa17.77■□□□□ 0.43
PPM1E-201ENST00000308249 EP400NLQ6ZTU2 488 aa17.77■□□□□ 0.43
PPM1E-201ENST00000308249 KCNG4Q8TDN1 519 aa17.76■□□□□ 0.43
PPM1E-201ENST00000308249 BICDL2A1A5D9 508 aa17.76■□□□□ 0.43
PPM1E-201ENST00000308249 CLNS1AP54105 237 aaKnown RBP17.76■□□□□ 0.43
PPM1E-201ENST00000308249 CASC4Q6P4E1 433 aa17.76■□□□□ 0.43
PPM1E-201ENST00000308249 SYT10Q6XYQ8 523 aa17.76■□□□□ 0.43
PPM1E-201ENST00000308249 KMT5BQ4FZB7 885 aa17.76■□□□□ 0.43
PPM1E-201ENST00000308249 STMN1P16949 149 aa17.76■□□□□ 0.43
PPM1E-201ENST00000308249 TRAF1Q13077 416 aa17.76■□□□□ 0.43
PPM1E-201ENST00000308249 NOP9Q86U38 636 aaKnown RBP17.76■□□□□ 0.43
PPM1E-201ENST00000308249 TRIM31Q9BZY9 425 aa17.76■□□□□ 0.43
PPM1E-201ENST00000308249 BMP15O95972 392 aa17.76■□□□□ 0.43
PPM1E-201ENST00000308249 ZSCAN22P10073 491 aaPredicted RBP17.76■□□□□ 0.43
PPM1E-201ENST00000308249 NUDT16Q96DE0 195 aaKnown RBP17.76■□□□□ 0.43
PPM1E-201ENST00000308249 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
PPM1E-201ENST00000308249 ATP5DP30049 168 aa17.75■□□□□ 0.43
PPM1E-201ENST00000308249 RRP36Q96EU6 259 aaKnown RBP17.75■□□□□ 0.43
PPM1E-201ENST00000308249 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.75■□□□□ 0.43
PPM1E-201ENST00000308249 FAM170AA1A519 330 aa17.75■□□□□ 0.43
PPM1E-201ENST00000308249 GTF3C6Q969F1 213 aa17.75■□□□□ 0.43
PPM1E-201ENST00000308249 CCDC26Q8TAB7 109 aa17.75■□□□□ 0.43
PPM1E-201ENST00000308249 CCDC62Q6P9F0 684 aa17.75■□□□□ 0.43
PPM1E-201ENST00000308249 TBC1D9Q6ZT07 1266 aa17.75■□□□□ 0.43
PPM1E-201ENST00000308249 UTP14CQ5TAP6 766 aaKnown RBP17.74■□□□□ 0.43
PPM1E-201ENST00000308249 BAG1Q99933 345 aaPredicted RBP17.74■□□□□ 0.43
PPM1E-201ENST00000308249 DBF4Q9UBU7 674 aaPredicted RBP17.74■□□□□ 0.43
PPM1E-201ENST00000308249 ZNF710Q8N1W2 664 aa17.74■□□□□ 0.43
PPM1E-201ENST00000308249 NCAPGQ9BPX3 1015 aa17.74■□□□□ 0.43
PPM1E-201ENST00000308249 Q6ZUG5 572 aa17.74■□□□□ 0.43
PPM1E-201ENST00000308249 VCXQ9H320 206 aa17.74■□□□□ 0.43
PPM1E-201ENST00000308249 DACT1Q9NYF0 836 aa17.74■□□□□ 0.43
PPM1E-201ENST00000308249 RTL1A6NKG5 1358 aa17.74■□□□□ 0.43
PPM1E-201ENST00000308249 CCDC169A6NNP5 214 aa17.74■□□□□ 0.43
PPM1E-201ENST00000308249 CCDC152Q4G0S7 254 aa17.74■□□□□ 0.43
PPM1E-201ENST00000308249 KRBA2Q6ZNG9 492 aa17.74■□□□□ 0.43
PPM1E-201ENST00000308249 CSRNP2Q9H175 543 aa17.74■□□□□ 0.43
PPM1E-201ENST00000308249 USTQ9Y2C2 406 aa17.74■□□□□ 0.43
PPM1E-201ENST00000308249 STK10O94804 968 aaKnown RBP17.73■□□□□ 0.43
PPM1E-201ENST00000308249 USP48Q86UV5 1035 aa17.73■□□□□ 0.43
PPM1E-201ENST00000308249 ANKRD50Q9ULJ7 1429 aa17.73■□□□□ 0.43
PPM1E-201ENST00000308249 UQCRFS1P1P0C7P4 283 aa17.73■□□□□ 0.43
PPM1E-201ENST00000308249 AMOTQ4VCS5 1084 aa17.73■□□□□ 0.43
PPM1E-201ENST00000308249 NAA16Q6N069 864 aaPredicted RBP17.73■□□□□ 0.43
PPM1E-201ENST00000308249 CHMP2AO43633 222 aa17.73■□□□□ 0.43
PPM1E-201ENST00000308249 CAVIN2O95810 425 aa17.73■□□□□ 0.43
PPM1E-201ENST00000308249 CCT6AP40227 531 aaKnown RBP17.73■□□□□ 0.43
PPM1E-201ENST00000308249 SLFN5Q08AF3 891 aa17.73■□□□□ 0.43
PPM1E-201ENST00000308249 SEPT8Q92599 483 aa17.73■□□□□ 0.43
PPM1E-201ENST00000308249 HMG20BQ9P0W2 317 aa17.73■□□□□ 0.43
PPM1E-201ENST00000308249 TNFAIP3P21580 790 aa17.73■□□□□ 0.43
PPM1E-201ENST00000308249 INPP1P49441 399 aa17.73■□□□□ 0.43
PPM1E-201ENST00000308249 CHST3Q7LGC8 479 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms