RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 MBD4O95243 580 aa18.68■□□□□ 0.58
BRD3-201ENST00000303407 HS1BP3Q53T59 392 aa18.68■□□□□ 0.58
BRD3-201ENST00000303407 TCERG1LQ5VWI1 586 aa18.68■□□□□ 0.58
BRD3-201ENST00000303407 NAPAP54920 295 aa18.68■□□□□ 0.58
BRD3-201ENST00000303407 XAGE2Q96GT9 111 aa18.68■□□□□ 0.58
BRD3-201ENST00000303407 CLASP1Q7Z460 1538 aa18.67■□□□□ 0.58
BRD3-201ENST00000303407 PTGS1P23219 599 aa18.67■□□□□ 0.58
BRD3-201ENST00000303407 ZKSCAN3Q9BRR0 538 aa18.67■□□□□ 0.58
BRD3-201ENST00000303407 BTG4Q9NY30 223 aa18.67■□□□□ 0.58
BRD3-201ENST00000303407 LMOD1P29536 600 aaPredicted RBP18.67■□□□□ 0.58
BRD3-201ENST00000303407 GCKRQ14397 625 aa18.67■□□□□ 0.58
BRD3-201ENST00000303407 PPP4R3AQ6IN85 833 aa18.67■□□□□ 0.58
BRD3-201ENST00000303407 SPDYE4A6NLX3 237 aa18.66■□□□□ 0.58
BRD3-201ENST00000303407 MCM9Q9NXL9 1143 aa18.66■□□□□ 0.58
BRD3-201ENST00000303407 TRIM21P19474 475 aaKnown RBP18.66■□□□□ 0.58
BRD3-201ENST00000303407 HSPA2P54652 639 aa18.66■□□□□ 0.58
BRD3-201ENST00000303407 ATL3Q6DD88 541 aa18.66■□□□□ 0.58
BRD3-201ENST00000303407 C8orf37Q96NL8 207 aa18.66■□□□□ 0.58
BRD3-201ENST00000303407 FEZ1Q99689 392 aa18.66■□□□□ 0.58
BRD3-201ENST00000303407 ZSWIM4Q9H7M6 989 aa18.66■□□□□ 0.58
BRD3-201ENST00000303407 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.65■□□□□ 0.583e-6■■■■■ 28.2
BRD3-201ENST00000303407 HSPA4P34932 840 aa18.65■□□□□ 0.58
BRD3-201ENST00000303407 JADE2Q9NQC1 790 aa18.65■□□□□ 0.58
BRD3-201ENST00000303407 DNAI1Q9UI46 699 aa18.65■□□□□ 0.58
BRD3-201ENST00000303407 NDUFB9Q9Y6M9 179 aa18.65■□□□□ 0.58
BRD3-201ENST00000303407 DESP17661 470 aa18.65■□□□□ 0.58
BRD3-201ENST00000303407 TPTE2Q6XPS3 522 aa18.65■□□□□ 0.58
BRD3-201ENST00000303407 B4E1Z4 1266 aa18.64■□□□□ 0.58
BRD3-201ENST00000303407 PUM3Q15397 648 aaKnown RBP18.64■□□□□ 0.58
BRD3-201ENST00000303407 ANKRD2Q9GZV1 360 aa18.64■□□□□ 0.58
BRD3-201ENST00000303407 A0A1B0GVL5 298 aa18.64■□□□□ 0.57
BRD3-201ENST00000303407 MCM7P33993 719 aa18.64■□□□□ 0.57
BRD3-201ENST00000303407 STXBP4Q6ZWJ1 553 aa18.64■□□□□ 0.57
BRD3-201ENST00000303407 A1BGP04217 495 aa18.64■□□□□ 0.57
BRD3-201ENST00000303407 LTKP29376 864 aa18.64■□□□□ 0.57
BRD3-201ENST00000303407 EHBP1Q8NDI1 1231 aa18.64■□□□□ 0.57
BRD3-201ENST00000303407 LLPHQ9BRT6 129 aaKnown RBP18.64■□□□□ 0.57
BRD3-201ENST00000303407 RBM28Q9NW13 759 aaKnown RBP18.64■□□□□ 0.57
BRD3-201ENST00000303407 SPAG1Q07617 926 aa18.64■□□□□ 0.57
BRD3-201ENST00000303407 C6orf50Q9HD87 102 aa18.64■□□□□ 0.57
BRD3-201ENST00000303407 ANKRD62A6NC57 917 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 TBCAO75347 108 aaKnown RBP18.63■□□□□ 0.57
BRD3-201ENST00000303407 CALML3P27482 149 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 GBP2P32456 591 aaPredicted RBP18.63■□□□□ 0.57
BRD3-201ENST00000303407 GOPCQ9HD26 462 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 IFNKQ9P0W0 207 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 ATP7BP35670 1465 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 KDRP35968 1356 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 LIG1P18858 919 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 CETN2P41208 172 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 ASIC1P78348 528 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 IL17REQ8NFR9 667 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 RRP36Q96EU6 259 aaKnown RBP18.63■□□□□ 0.57
BRD3-201ENST00000303407 FAM160A1Q05DH4 1040 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 SYCP3Q8IZU3 236 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 ERMNQ8TAM6 284 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 ARMT1Q9H993 441 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 NCOA5Q9HCD5 579 aaKnown RBP18.63■□□□□ 0.57
BRD3-201ENST00000303407 JAG2Q9Y219 1238 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 RTCBQ9Y3I0 505 aaKnown RBP18.63■□□□□ 0.57
BRD3-201ENST00000303407 SHTN1A0MZ66 631 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 TMCO5BA8MYB1 307 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 KCNQ3O43525 872 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 KRI1Q8N9T8 703 aaKnown RBP18.63■□□□□ 0.57
BRD3-201ENST00000303407 PKNOX2Q96KN3 472 aa18.63■□□□□ 0.57
BRD3-201ENST00000303407 PSMA7O14818 248 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 CETN1Q12798 172 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 TRMT1LQ7Z2T5 733 aaKnown RBP18.62■□□□□ 0.57
BRD3-201ENST00000303407 ELP1O95163 1332 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 AATKQ6ZMQ8 1374 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 EFCAB6Q5THR3 1501 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 PDE8AO60658 829 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
BRD3-201ENST00000303407 ZNF521Q96K83 1311 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 KBTBD3Q8NAB2 608 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 APPBP2Q92624 585 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 DENND2AQ9ULE3 1009 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 METP08581 1390 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 NEURL1BA8MQ27 555 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 NAA15Q9BXJ9 866 aaKnown RBP18.62■□□□□ 0.57
BRD3-201ENST00000303407 SAMM50Q9Y512 469 aa18.62■□□□□ 0.57
BRD3-201ENST00000303407 BMS1Q14692 1282 aaKnown RBP18.61■□□□□ 0.57
BRD3-201ENST00000303407 LDHBP07195 334 aaKnown RBP18.61■□□□□ 0.57
BRD3-201ENST00000303407 CHD1O14646 1710 aa18.61■□□□□ 0.57
BRD3-201ENST00000303407 GADD45BO75293 160 aaPredicted RBP18.61■□□□□ 0.57
BRD3-201ENST00000303407 NOP2P46087 812 aaKnown RBP18.61■□□□□ 0.57
BRD3-201ENST00000303407 GPAA1O43292 621 aa18.61■□□□□ 0.57
BRD3-201ENST00000303407 USP44Q9H0E7 712 aa18.61■□□□□ 0.57
BRD3-201ENST00000303407 LMBRD1Q9NUN5 540 aa18.61■□□□□ 0.57
BRD3-201ENST00000303407 GOLGA6L7A0A1B0GV03 622 aa18.6■□□□□ 0.57
BRD3-201ENST00000303407 MYO1BO43795 1136 aa18.6■□□□□ 0.57
BRD3-201ENST00000303407 CYLC1P35663 651 aaPredicted RBP18.6■□□□□ 0.57
BRD3-201ENST00000303407 STX17P56962 302 aa18.6■□□□□ 0.57
BRD3-201ENST00000303407 IFFO1Q0D2I5 559 aa18.6■□□□□ 0.57
BRD3-201ENST00000303407 ZNF496Q96IT1 587 aaPredicted RBP18.6■□□□□ 0.57
BRD3-201ENST00000303407 TMEM87BQ96K49 555 aa18.6■□□□□ 0.57
BRD3-201ENST00000303407 USP8P40818 1118 aa18.6■□□□□ 0.57
BRD3-201ENST00000303407 CLSTN2Q9H4D0 955 aa18.6■□□□□ 0.57
BRD3-201ENST00000303407 MMRN2Q9H8L6 949 aa18.6■□□□□ 0.57
BRD3-201ENST00000303407 CCDC113Q9H0I3 377 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms