RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 PLIN2Q99541 437 aa23.68■■□□□ 1.38
LTBP3-201ENST00000301873 SPATA31E1Q6ZUB1 1445 aa23.68■■□□□ 1.38
LTBP3-201ENST00000301873 KCNQ3O43525 872 aa23.68■■□□□ 1.38
LTBP3-201ENST00000301873 BTG4Q9NY30 223 aa23.68■■□□□ 1.38
LTBP3-201ENST00000301873 ITGA6P23229 1130 aa23.68■■□□□ 1.38
LTBP3-201ENST00000301873 GCKRQ14397 625 aa23.68■■□□□ 1.38
LTBP3-201ENST00000301873 BABAM1Q9NWV8 329 aa23.68■■□□□ 1.38
LTBP3-201ENST00000301873 GNAT2P19087 354 aa23.68■■□□□ 1.38
LTBP3-201ENST00000301873 MCM3P25205 808 aa23.68■■□□□ 1.38
LTBP3-201ENST00000301873 BRAPQ7Z569 592 aa23.68■■□□□ 1.38
LTBP3-201ENST00000301873 ZC3H12CQ9C0D7 883 aaKnown RBP23.68■■□□□ 1.38
LTBP3-201ENST00000301873 TRPM2O94759 1503 aa23.67■■□□□ 1.38
LTBP3-201ENST00000301873 IL17REQ8NFR9 667 aa23.67■■□□□ 1.38
LTBP3-201ENST00000301873 ADGRL2O95490 1459 aa23.67■■□□□ 1.38
LTBP3-201ENST00000301873 PRDM1O75626 825 aa23.67■■□□□ 1.38
LTBP3-201ENST00000301873 MCM7P33993 719 aa23.67■■□□□ 1.38
LTBP3-201ENST00000301873 EIF4A1P60842 406 aaKnown RBP23.67■■□□□ 1.38
LTBP3-201ENST00000301873 ST5P78524 1137 aa23.67■■□□□ 1.38
LTBP3-201ENST00000301873 MCM6Q14566 821 aa23.67■■□□□ 1.38
LTBP3-201ENST00000301873 CTAGE1Q96RT6 745 aa23.67■■□□□ 1.38
LTBP3-201ENST00000301873 WWC3Q9ULE0 1092 aa23.67■■□□□ 1.38
LTBP3-201ENST00000301873 HELLSQ9NRZ9 838 aa23.66■■□□□ 1.38
LTBP3-201ENST00000301873 GSPT1P15170 499 aaKnown RBP23.66■■□□□ 1.38
LTBP3-201ENST00000301873 KBTBD3Q8NAB2 608 aa23.66■■□□□ 1.38
LTBP3-201ENST00000301873 DDX17Q92841 729 aaKnown RBP23.66■■□□□ 1.38
LTBP3-201ENST00000301873 XAGE2Q96GT9 111 aa23.66■■□□□ 1.38
LTBP3-201ENST00000301873 SHTN1A0MZ66 631 aa23.66■■□□□ 1.38
LTBP3-201ENST00000301873 TBCAO75347 108 aaKnown RBP23.66■■□□□ 1.38
LTBP3-201ENST00000301873 CALML3P27482 149 aa23.66■■□□□ 1.38
LTBP3-201ENST00000301873 SH3TC1Q8TE82 1336 aa23.65■■□□□ 1.38
LTBP3-201ENST00000301873 ZHX1Q9UKY1 873 aaPredicted RBP23.65■■□□□ 1.38
LTBP3-201ENST00000301873 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.65■■□□□ 1.38
LTBP3-201ENST00000301873 GPAA1O43292 621 aa23.65■■□□□ 1.38
LTBP3-201ENST00000301873 GADD45BO75293 160 aaPredicted RBP23.65■■□□□ 1.38
LTBP3-201ENST00000301873 TNNI2P48788 182 aa23.65■■□□□ 1.38
LTBP3-201ENST00000301873 NAA15Q9BXJ9 866 aaKnown RBP23.65■■□□□ 1.38
LTBP3-201ENST00000301873 CYLC1P35663 651 aaPredicted RBP23.64■■□□□ 1.38
LTBP3-201ENST00000301873 ARID5AQ03989 594 aa23.64■■□□□ 1.38
LTBP3-201ENST00000301873 PPP4R3AQ6IN85 833 aa23.64■■□□□ 1.38
LTBP3-201ENST00000301873 UBAP1LF5GYI3 381 aa23.64■■□□□ 1.38
LTBP3-201ENST00000301873 HS1BP3Q53T59 392 aa23.64■■□□□ 1.38
LTBP3-201ENST00000301873 FAM160A1Q05DH4 1040 aa23.64■■□□□ 1.37
LTBP3-201ENST00000301873 KARSQ15046 597 aaKnown RBP23.64■■□□□ 1.37
LTBP3-201ENST00000301873 DNAJC10Q8IXB1 793 aa23.64■■□□□ 1.37
LTBP3-201ENST00000301873 ARFGAP3Q9NP61 516 aa23.64■■□□□ 1.37
LTBP3-201ENST00000301873 KRI1Q8N9T8 703 aaKnown RBP23.64■■□□□ 1.37
LTBP3-201ENST00000301873 APPBP2Q92624 585 aa23.64■■□□□ 1.37
LTBP3-201ENST00000301873 ABCC2Q92887 1545 aa23.63■■□□□ 1.37
LTBP3-201ENST00000301873 PLEKHG3A1L390 1219 aa23.63■■□□□ 1.37
LTBP3-201ENST00000301873 LMAN1P49257 510 aa23.63■■□□□ 1.37
LTBP3-201ENST00000301873 LZTFL1Q9NQ48 299 aa23.63■■□□□ 1.37
LTBP3-201ENST00000301873 RTCBQ9Y3I0 505 aaKnown RBP23.63■■□□□ 1.37
LTBP3-201ENST00000301873 PCDH11XQ9BZA7 1347 aa23.63■■□□□ 1.37
LTBP3-201ENST00000301873 PCDH11YQ9BZA8 1340 aa23.63■■□□□ 1.37
LTBP3-201ENST00000301873 LRRC27Q9C0I9 530 aa23.63■■□□□ 1.37
LTBP3-201ENST00000301873 SLC52A2Q9HAB3 445 aa23.63■■□□□ 1.37
LTBP3-201ENST00000301873 BLMP54132 1417 aaPredicted RBP23.63■■□□□ 1.37
LTBP3-201ENST00000301873 JAK2O60674 1132 aa23.63■■□□□ 1.37
LTBP3-201ENST00000301873 DESP17661 470 aa23.63■■□□□ 1.37
LTBP3-201ENST00000301873 EHMT1Q9H9B1 1298 aa23.63■■□□□ 1.37
LTBP3-201ENST00000301873 SLU7O95391 586 aaKnown RBP23.62■■□□□ 1.37
LTBP3-201ENST00000301873 CALM1P0DP23 149 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 CALM2P0DP24 149 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 CALM3P0DP25 149 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 CTR9Q6PD62 1173 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 VWA3AA6NCI4 1184 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 TAF5LO75529 589 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 ARMT1Q9H993 441 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 C6orf50Q9HD87 102 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 RRAGDQ9NQL2 400 aaPredicted RBP23.62■■□□□ 1.37
LTBP3-201ENST00000301873 HSPA4P34932 840 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 KRT2P35908 639 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 TTLL12Q14166 644 aaPredicted RBP23.62■■□□□ 1.37
LTBP3-201ENST00000301873 ZNF174Q15697 407 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 IQUBQ8NA54 791 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 MYL10Q9BUA6 226 aa23.62■■□□□ 1.37
LTBP3-201ENST00000301873 CCDC175P0C221 793 aa23.61■■□□□ 1.37
LTBP3-201ENST00000301873 STXBP4Q6ZWJ1 553 aa23.61■■□□□ 1.37
LTBP3-201ENST00000301873 ERMNQ8TAM6 284 aa23.61■■□□□ 1.37
LTBP3-201ENST00000301873 LMBRD1Q9NUN5 540 aa23.61■■□□□ 1.37
LTBP3-201ENST00000301873 ANGEL1Q9UNK9 670 aaKnown RBP23.61■■□□□ 1.37
LTBP3-201ENST00000301873 CTAGE15A4D2H0 777 aa23.61■■□□□ 1.37
LTBP3-201ENST00000301873 CTAGE8P0CG41 777 aa23.61■■□□□ 1.37
LTBP3-201ENST00000301873 GBP2P32456 591 aaPredicted RBP23.61■■□□□ 1.37
LTBP3-201ENST00000301873 SYT10Q6XYQ8 523 aa23.61■■□□□ 1.37
LTBP3-201ENST00000301873 CTAGE6Q86UF2 777 aa23.61■■□□□ 1.37
LTBP3-201ENST00000301873 CTAGE4Q8IX94 777 aa23.61■■□□□ 1.37
LTBP3-201ENST00000301873 POTEB2H3BUK9 544 aa23.61■■□□□ 1.37
LTBP3-201ENST00000301873 LDHBP07195 334 aaKnown RBP23.61■■□□□ 1.37
LTBP3-201ENST00000301873 ZRSR2Q15696 482 aaKnown RBP23.6■■□□□ 1.37
LTBP3-201ENST00000301873 KRT79Q5XKE5 535 aa23.6■■□□□ 1.37
LTBP3-201ENST00000301873 RIMBP2O15034 1052 aa23.6■■□□□ 1.37
LTBP3-201ENST00000301873 LTKP29376 864 aa23.6■■□□□ 1.37
LTBP3-201ENST00000301873 DTHD1Q6ZMT9 781 aa23.6■■□□□ 1.37
LTBP3-201ENST00000301873 EAF2Q96CJ1 260 aaPredicted RBP23.6■■□□□ 1.37
LTBP3-201ENST00000301873 PALD1Q9ULE6 856 aa23.6■■□□□ 1.37
LTBP3-201ENST00000301873 FAM107BQ9H098 131 aa23.6■■□□□ 1.37
LTBP3-201ENST00000301873 ABCC4O15439 1325 aa23.6■■□□□ 1.37
LTBP3-201ENST00000301873 MYL5Q02045 173 aa23.59■■□□□ 1.37
LTBP3-201ENST00000301873 ZNF804AQ7Z570 1209 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms