RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 CARMIL3Q8ND23 1372 aa15.8■□□□□ 0.12
CTTN-201ENST00000301843 KLF18A0A0U1RQI7 1052 aa15.79■□□□□ 0.12
CTTN-201ENST00000301843 KIF28PB7ZC32 967 aa15.79■□□□□ 0.12
CTTN-201ENST00000301843 ATP1A3P13637 1013 aa15.79■□□□□ 0.12
CTTN-201ENST00000301843 CABP4P57796 275 aa15.79■□□□□ 0.12
CTTN-201ENST00000301843 EXOSC10Q01780 885 aaKnown RBP15.79■□□□□ 0.12
CTTN-201ENST00000301843 FAM177A1Q8N128 213 aaPredicted RBP15.79■□□□□ 0.12
CTTN-201ENST00000301843 ANO10Q9NW15 660 aa15.79■□□□□ 0.12
CTTN-201ENST00000301843 GOLGA8BA8MQT2 603 aa15.79■□□□□ 0.12
CTTN-201ENST00000301843 FOXO4P98177 505 aa15.79■□□□□ 0.12
CTTN-201ENST00000301843 SYT10Q6XYQ8 523 aa15.79■□□□□ 0.12
CTTN-201ENST00000301843 SYNE4Q8N205 404 aa15.79■□□□□ 0.12
CTTN-201ENST00000301843 MRPS27Q92552 414 aaKnown RBP15.79■□□□□ 0.12
CTTN-201ENST00000301843 INCENPQ9NQS7 918 aa15.79■□□□□ 0.12
CTTN-201ENST00000301843 MEGF6O75095 1541 aa15.79■□□□□ 0.12
CTTN-201ENST00000301843 FMR1NBQ8N0W7 255 aaPredicted RBP15.78■□□□□ 0.12
CTTN-201ENST00000301843 ZNF396Q96N95 335 aaPredicted RBP15.78■□□□□ 0.12
CTTN-201ENST00000301843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.78■□□□□ 0.128e-11■■□□□ 12.9
CTTN-201ENST00000301843 SPECC1Q5M775 1068 aa15.78■□□□□ 0.12
CTTN-201ENST00000301843 NAA16Q6N069 864 aaPredicted RBP15.78■□□□□ 0.12
CTTN-201ENST00000301843 CCAR2Q8N163 923 aaKnown RBP15.78■□□□□ 0.12
CTTN-201ENST00000301843 C8orf76Q96K31 380 aa15.78■□□□□ 0.12
CTTN-201ENST00000301843 ORC3Q9UBD5 711 aaPredicted RBP15.78■□□□□ 0.12
CTTN-201ENST00000301843 COL18A1P39060 1754 aa15.78■□□□□ 0.12
CTTN-201ENST00000301843 PALLDQ8WX93 1383 aa15.78■□□□□ 0.12
CTTN-201ENST00000301843 FBXO38Q6PIJ6 1188 aa15.78■□□□□ 0.12
CTTN-201ENST00000301843 MRFAP1L1Q96HT8 127 aa15.78■□□□□ 0.12
CTTN-201ENST00000301843 CASP7P55210 303 aa15.77■□□□□ 0.12
CTTN-201ENST00000301843 RABL6Q3YEC7 729 aaPredicted RBP15.77■□□□□ 0.12
CTTN-201ENST00000301843 ZMYM1Q5SVZ6 1142 aa15.77■□□□□ 0.12
CTTN-201ENST00000301843 ABCC6O95255 1503 aa15.77■□□□□ 0.12
CTTN-201ENST00000301843 ERCC6LQ2NKX8 1250 aa15.77■□□□□ 0.11
CTTN-201ENST00000301843 ARMCX5Q6P1M9 558 aa15.77■□□□□ 0.11
CTTN-201ENST00000301843 IFNL2Q8IZJ0 200 aa15.77■□□□□ 0.11
CTTN-201ENST00000301843 MYL10Q9BUA6 226 aa15.77■□□□□ 0.11
CTTN-201ENST00000301843 PUS7LQ9H0K6 701 aaKnown RBP15.77■□□□□ 0.11
CTTN-201ENST00000301843 PAXBP1Q9Y5B6 917 aa15.77■□□□□ 0.11
CTTN-201ENST00000301843 PRC1O43663 620 aa15.76■□□□□ 0.11
CTTN-201ENST00000301843 PHKBQ93100 1093 aa15.76■□□□□ 0.11
CTTN-201ENST00000301843 SENP2Q9HC62 589 aa15.76■□□□□ 0.11
CTTN-201ENST00000301843 MRC1P22897 1456 aa15.76■□□□□ 0.11
CTTN-201ENST00000301843 CPLX1O14810 134 aa15.76■□□□□ 0.11
CTTN-201ENST00000301843 RNF113AO15541 343 aaKnown RBP15.76■□□□□ 0.11
CTTN-201ENST00000301843 FOXP2O15409 715 aa15.76■□□□□ 0.11
CTTN-201ENST00000301843 FGAP02671 866 aa15.76■□□□□ 0.11
CTTN-201ENST00000301843 E4F1Q66K89 784 aaPredicted RBP15.76■□□□□ 0.11
CTTN-201ENST00000301843 LINC00301Q8NCQ3 95 aa15.76■□□□□ 0.11
CTTN-201ENST00000301843 CLIC6Q96NY7 704 aa15.76■□□□□ 0.11
CTTN-201ENST00000301843 SH3TC1Q8TE82 1336 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 ERICH4A6NGS2 130 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 SARM1Q6SZW1 724 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 NYAP1Q6ZVC0 841 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 DPF2Q92785 391 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 LLPHQ9BRT6 129 aaKnown RBP15.75■□□□□ 0.11
CTTN-201ENST00000301843 EPC1Q9H2F5 836 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 KIAA1468Q9P260 1216 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 LAMA4Q16363 1823 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 MROH7-TTC4A0A0A0MT08 1334 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 ATF3P18847 181 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 ZAP70P43403 619 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 CCDC82Q8N4S0 544 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 KIF18AQ8NI77 898 aa15.75■□□□□ 0.11
CTTN-201ENST00000301843 SPTLC2O15270 562 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 WDHD1O75717 1129 aaPredicted RBP15.74■□□□□ 0.11
CTTN-201ENST00000301843 ZNF202O95125 648 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 SLC3A2P08195 630 aaKnown RBP15.74■□□□□ 0.11
CTTN-201ENST00000301843 PDIA4P13667 645 aaKnown RBP15.74■□□□□ 0.11
CTTN-201ENST00000301843 HOMER1Q86YM7 354 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 FAM89AQ96GI7 184 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 OGFRQ9NZT2 677 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 SALL1Q9NSC2 1324 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 CTAGE5O15320 804 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 HMGB1P09429 215 aaKnown RBP15.74■□□□□ 0.11
CTTN-201ENST00000301843 PLBD2Q8NHP8 589 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 DCAF5Q96JK2 942 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 A0A0U1RQG5 324 aaPredicted RBP15.74■□□□□ 0.11
CTTN-201ENST00000301843 APPP05067 770 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 CDC25BP30305 580 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 TTC39AQ5SRH9 613 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 DSCC1Q9BVC3 393 aa15.74■□□□□ 0.11
CTTN-201ENST00000301843 CWC25Q9NXE8 425 aaPredicted RBP15.74■□□□□ 0.11
CTTN-201ENST00000301843 PLEKHG2Q9H7P9 1386 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 PFKFB1P16118 471 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 RBM6P78332 1123 aaKnown RBP15.73■□□□□ 0.11
CTTN-201ENST00000301843 UTP14CQ5TAP6 766 aaKnown RBP15.73■□□□□ 0.11
CTTN-201ENST00000301843 SYNE3Q6ZMZ3 975 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 HELLSQ9NRZ9 838 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 CGNQ9P2M7 1197 aaKnown RBP15.73■□□□□ 0.11
CTTN-201ENST00000301843 DDX41Q9UJV9 622 aaKnown RBP15.73■□□□□ 0.11
CTTN-201ENST00000301843 HPS5Q9UPZ3 1129 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 EYA2O00167 538 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 ANTXR2P58335 489 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 PNOCQ13519 176 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 MYSM1Q5VVJ2 828 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 ADALQ6DHV7 355 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 MICU3Q86XE3 530 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 TMEM94Q12767 1356 aa15.73■□□□□ 0.11
CTTN-201ENST00000301843 PPP1R13BQ96KQ4 1090 aa15.72■□□□□ 0.11
CTTN-201ENST00000301843 TMEM232C9JQI7 657 aa15.72■□□□□ 0.11
CTTN-201ENST00000301843 FOXN1O15353 648 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms