RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 PDE6AP16499 860 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 KRT32Q14532 448 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 ANO8Q9HCE9 1232 aaPredicted RBP23.3■■□□□ 1.32
C11orf49-201ENST00000278460 CIZ1Q9ULV3 898 aaPredicted RBP23.3■■□□□ 1.32
C11orf49-201ENST00000278460 LEMD3Q9Y2U8 911 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 CYP46A1Q9Y6A2 500 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 CACNA1SQ13698 1873 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 LTBP1Q14766 1721 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 TCRBV5S4A2TA0A5A2 114 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 BBOX1O75936 387 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 VPS53Q5VIR6 699 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 VPS37DQ86XT2 251 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 PUS7LQ9H0K6 701 aaKnown RBP23.3■■□□□ 1.32
C11orf49-201ENST00000278460 STK32BQ9NY57 414 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 WWC3Q9ULE0 1092 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 DENND2AQ9ULE3 1009 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 PARP3Q9Y6F1 533 aa23.3■■□□□ 1.32
C11orf49-201ENST00000278460 XDHP47989 1333 aa23.29■■□□□ 1.32
C11orf49-201ENST00000278460 PDS5AQ29RF7 1337 aaKnown RBP23.29■■□□□ 1.32
C11orf49-201ENST00000278460 IRS2Q9Y4H2 1338 aa23.29■■□□□ 1.32
C11orf49-201ENST00000278460 COL1A1P02452 1464 aaPredicted RBP23.29■■□□□ 1.32
C11orf49-201ENST00000278460 MAST2Q6P0Q8 1798 aa23.29■■□□□ 1.32
C11orf49-201ENST00000278460 RUFY3Q7L099 469 aa23.29■■□□□ 1.32
C11orf49-201ENST00000278460 TMX3Q96JJ7 454 aa23.29■■□□□ 1.32
C11orf49-201ENST00000278460 CHD4Q14839 1912 aa23.29■■□□□ 1.32
C11orf49-201ENST00000278460 ZNF532Q9HCE3 1301 aa23.28■■□□□ 1.32
C11orf49-201ENST00000278460 MMP10P09238 476 aa23.28■■□□□ 1.32
C11orf49-201ENST00000278460 BAG6P46379 1132 aa23.28■■□□□ 1.32
C11orf49-201ENST00000278460 KIAA1551Q9HCM1 1747 aa23.28■■□□□ 1.32
C11orf49-201ENST00000278460 GPAA1O43292 621 aa23.27■■□□□ 1.32
C11orf49-201ENST00000278460 HIBADHP31937 336 aaKnown RBP23.27■■□□□ 1.32
C11orf49-201ENST00000278460 SF3B2Q13435 895 aaKnown RBP23.27■■□□□ 1.32
C11orf49-201ENST00000278460 TMC4Q7Z404 712 aa23.27■■□□□ 1.32
C11orf49-201ENST00000278460 CYP21A2P08686 494 aa23.26■■□□□ 1.31
C11orf49-201ENST00000278460 KLRK1P26718 216 aa23.26■■□□□ 1.31
C11orf49-201ENST00000278460 CUL4AQ13619 759 aa23.26■■□□□ 1.31
C11orf49-201ENST00000278460 C15orf52Q6ZUT6 534 aaKnown RBP23.26■■□□□ 1.31
C11orf49-201ENST00000278460 ANKIB1Q9P2G1 1089 aa23.26■■□□□ 1.31
C11orf49-201ENST00000278460 AK2P54819 239 aa23.26■■□□□ 1.31
C11orf49-201ENST00000278460 BLOC1S2Q6QNY1 142 aa23.26■■□□□ 1.31
C11orf49-201ENST00000278460 PDRG1Q9NUG6 133 aa23.26■■□□□ 1.31
C11orf49-201ENST00000278460 IQSEC3Q9UPP2 1182 aaPredicted RBP23.26■■□□□ 1.31
C11orf49-201ENST00000278460 TAF6LQ9Y6J9 622 aa23.26■■□□□ 1.31
C11orf49-201ENST00000278460 FOXP2O15409 715 aa23.25■■□□□ 1.31
C11orf49-201ENST00000278460 MAGEB6Q8N7X4 407 aa23.25■■□□□ 1.31
C11orf49-201ENST00000278460 ALDH8A1Q9H2A2 487 aaPredicted RBP23.25■■□□□ 1.31
C11orf49-201ENST00000278460 CTNNA3Q9UI47 895 aa23.25■■□□□ 1.31
C11orf49-201ENST00000278460 PDE6BP35913 854 aa23.24■■□□□ 1.31
C11orf49-201ENST00000278460 CWC22Q9HCG8 908 aaKnown RBP23.24■■□□□ 1.31
C11orf49-201ENST00000278460 FOXD4L1Q9NU39 408 aa23.24■■□□□ 1.31
C11orf49-201ENST00000278460 LRP2BPQ9P2M1 347 aa23.24■■□□□ 1.31
C11orf49-201ENST00000278460 CPA1P15085 419 aa23.23■■□□□ 1.31
C11orf49-201ENST00000278460 ATP2B4P23634 1241 aa23.23■■□□□ 1.31
C11orf49-201ENST00000278460 GPSM2P81274 684 aa23.23■■□□□ 1.31
C11orf49-201ENST00000278460 MSL1Q68DK7 614 aa23.23■■□□□ 1.31
C11orf49-201ENST00000278460 SRGNP10124 158 aa23.22■■□□□ 1.31
C11orf49-201ENST00000278460 NPR1P16066 1061 aa23.22■■□□□ 1.31
C11orf49-201ENST00000278460 RPS6KB1P23443 525 aa23.22■■□□□ 1.31
C11orf49-201ENST00000278460 INTS4Q96HW7 963 aaKnown RBP23.22■■□□□ 1.31
C11orf49-201ENST00000278460 PODXL2Q9NZ53 605 aa23.22■■□□□ 1.31
C11orf49-201ENST00000278460 LIMCH1Q9UPQ0 1083 aa23.22■■□□□ 1.31
C11orf49-201ENST00000278460 NEK1Q96PY6 1258 aa23.22■■□□□ 1.31
C11orf49-201ENST00000278460 NOL8Q76FK4 1167 aaKnown RBP23.21■■□□□ 1.31
C11orf49-201ENST00000278460 TXNRD3Q86VQ6 643 aa23.21■■□□□ 1.31
C11orf49-201ENST00000278460 SP8Q8IXZ3 490 aa23.21■■□□□ 1.31
C11orf49-201ENST00000278460 AIDAQ96BJ3 306 aa23.21■■□□□ 1.31
C11orf49-201ENST00000278460 DUOX1Q9NRD9 1551 aa23.21■■□□□ 1.31
C11orf49-201ENST00000278460 PPEF1O14829 653 aaPredicted RBP23.2■■□□□ 1.3
C11orf49-201ENST00000278460 FRAT2O75474 233 aaPredicted RBP23.2■■□□□ 1.3
C11orf49-201ENST00000278460 FGAP02671 866 aa23.2■■□□□ 1.3
C11orf49-201ENST00000278460 NFKBIBQ15653 356 aa23.2■■□□□ 1.3
C11orf49-201ENST00000278460 SLC51AQ86UW1 340 aa23.2■■□□□ 1.3
C11orf49-201ENST00000278460 STRBPQ96SI9 672 aaKnown RBP23.2■■□□□ 1.3
C11orf49-201ENST00000278460 ABCF2Q9UG63 623 aa23.2■■□□□ 1.3
C11orf49-201ENST00000278460 GGA1Q9UJY5 639 aa23.2■■□□□ 1.3
C11orf49-201ENST00000278460 HMGB1P09429 215 aaKnown RBP23.19■■□□□ 1.3
C11orf49-201ENST00000278460 ALDH1B1P30837 517 aa23.19■■□□□ 1.3
C11orf49-201ENST00000278460 ANKRD1Q15327 319 aa23.19■■□□□ 1.3
C11orf49-201ENST00000278460 STOX1Q6ZVD7 989 aa23.19■■□□□ 1.3
C11orf49-201ENST00000278460 ZSCAN31Q96LW9 406 aaPredicted RBP23.19■■□□□ 1.3
C11orf49-201ENST00000278460 NSFL1CQ9UNZ2 370 aaKnown RBP23.19■■□□□ 1.3
C11orf49-201ENST00000278460 ZMYM6O95789 1325 aa23.19■■□□□ 1.3
C11orf49-201ENST00000278460 IGSF3O75054 1194 aa23.19■■□□□ 1.3
C11orf49-201ENST00000278460 ALX1Q15699 326 aa23.19■■□□□ 1.3
C11orf49-201ENST00000278460 IMMTQ16891 758 aaKnown RBP23.19■■□□□ 1.3
C11orf49-201ENST00000278460 ZNF804AQ7Z570 1209 aa23.19■■□□□ 1.3
C11orf49-201ENST00000278460 DEFB132Q7Z7B7 95 aa23.19■■□□□ 1.3
C11orf49-201ENST00000278460 RAI14Q9P0K7 980 aa23.19■■□□□ 1.3
C11orf49-201ENST00000278460 UFL1O94874 794 aa23.18■■□□□ 1.3
C11orf49-201ENST00000278460 MBD4O95243 580 aa23.18■■□□□ 1.3
C11orf49-201ENST00000278460 NBR1Q14596 966 aa23.18■■□□□ 1.3
C11orf49-201ENST00000278460 TTLL5Q6EMB2 1281 aa23.18■■□□□ 1.3
C11orf49-201ENST00000278460 TMED8Q6PL24 325 aaPredicted RBP23.18■■□□□ 1.3
C11orf49-201ENST00000278460 ZGPATQ8N5A5 531 aaKnown RBP23.18■■□□□ 1.3
C11orf49-201ENST00000278460 TDRD7Q8NHU6 1098 aaKnown RBP23.18■■□□□ 1.3
C11orf49-201ENST00000278460 MASTLQ96GX5 879 aa23.18■■□□□ 1.3
C11orf49-201ENST00000278460 ATP6V0A2Q9Y487 856 aa23.18■■□□□ 1.3
C11orf49-201ENST00000278460 E7EWF7 191 aa23.17■■□□□ 1.3
C11orf49-201ENST00000278460 GNAT2P19087 354 aa23.17■■□□□ 1.3
C11orf49-201ENST00000278460 CYP7A1P22680 504 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms