RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TNNT1P13805 278 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 SYT1P21579 422 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 USP8P40818 1118 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 FAM200AQ8TCP9 573 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 LPIN2Q92539 896 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 RRP36Q96EU6 259 aaKnown RBP12.89□□□□□ -0.35
USP6NL-201ENST00000277575 USP44Q9H0E7 712 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 B4E1Z4 1266 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 TCIRG1Q13488 830 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 CCDC24Q8N4L8 307 aa12.89□□□□□ -0.35
USP6NL-201ENST00000277575 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
USP6NL-201ENST00000277575 CWC15Q9P013 229 aaKnown RBP12.89□□□□□ -0.35
USP6NL-201ENST00000277575 AOX1Q06278 1338 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 TMEM94Q12767 1356 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 GPAA1O43292 621 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 TNNI2P48788 182 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 FAM193AP78312 1265 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 SEPT7Q16181 437 aaKnown RBP12.88□□□□□ -0.35
USP6NL-201ENST00000277575 ANO6Q4KMQ2 910 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 LEKR1Q6ZMV7 388 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 USP21Q9UK80 565 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 NEURL1BA8MQ27 555 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 RAB3GAP1Q15042 981 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 TSPYL1Q9H0U9 437 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 PLXNC1O60486 1568 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
USP6NL-201ENST00000277575 GNA11P29992 359 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 PAFAH1B1P43034 410 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 UBASH3AP57075 661 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 HSP90AA4PQ58FG1 418 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 CCDC150Q8NCX0 1101 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 DNAI2Q9GZS0 605 aa12.88□□□□□ -0.35
USP6NL-201ENST00000277575 BRAPQ7Z569 592 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 DHX58Q96C10 678 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 ARMT1Q9H993 441 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 MYO5CQ9NQX4 1742 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 SPDYE3A6NKU9 549 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 ASIC1P78348 528 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 SPAG1Q07617 926 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 STK32BQ9NY57 414 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 GGA1Q9UJY5 639 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 NDUFB9Q9Y6M9 179 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 PSMA7O14818 248 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 SLC27A2O14975 620 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 TAX1BP1Q86VP1 789 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 CCDC102AQ96A19 550 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 GBP3Q9H0R5 595 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 RPS6KB1P23443 525 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 CASQ1P31415 396 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 MLH3Q9UHC1 1453 aa12.87□□□□□ -0.35
USP6NL-201ENST00000277575 KRT2P35908 639 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 KRT79Q5XKE5 535 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 MPHOSPH6Q99547 160 aaKnown RBP12.86□□□□□ -0.35
USP6NL-201ENST00000277575 DNAJC25Q9H1X3 360 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 PLEKHG1Q9ULL1 1385 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 KDM2BQ8NHM5 1336 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 TMCO3Q6UWJ1 677 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 TMEM87BQ96K49 555 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 CRACR2AQ9BSW2 395 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 EFCAB6Q5THR3 1501 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 AKR1B10O60218 316 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 WDR66Q8TBY9 1149 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 MAGI2Q86UL8 1455 aa12.86□□□□□ -0.35
USP6NL-201ENST00000277575 PRDM1O75626 825 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 NEBLO76041 1014 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 LUZP1Q86V48 1076 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 ARHGEF25Q86VW2 580 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 ABCC4O15439 1325 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 TAF3Q5VWG9 929 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 CCDC174Q6PII3 467 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 PDCL2Q8N4E4 241 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 SSH3Q8TE77 659 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 ANGEL1Q9UNK9 670 aaKnown RBP12.85□□□□□ -0.35
USP6NL-201ENST00000277575 SNX14Q9Y5W7 946 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 RTL1A6NKG5 1358 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 TTLL7Q6ZT98 887 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 SPAG5Q96R06 1193 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 SAP30BPQ9UHR5 308 aaKnown RBP12.85□□□□□ -0.35
USP6NL-201ENST00000277575 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 GCC2Q8IWJ2 1684 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 MACROD2A1Z1Q3 448 aa12.85□□□□□ -0.35
USP6NL-201ENST00000277575 RNF123Q5XPI4 1314 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 ZAP70P43403 619 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 AOPEPQ8N6M6 819 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 ADGBQ8N7X0 1667 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 GOLGA6L9A6NEM1 432 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 LMOD1P29536 600 aaPredicted RBP12.84□□□□□ -0.35
USP6NL-201ENST00000277575 MCM7P33993 719 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 RPS8P62241 208 aaKnown RBP12.84□□□□□ -0.35
USP6NL-201ENST00000277575 RBM28Q9NW13 759 aaKnown RBP12.84□□□□□ -0.35
USP6NL-201ENST00000277575 SAMD9LQ8IVG5 1584 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 AATKQ6ZMQ8 1374 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 ANKRD62A6NC57 917 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 PARP1P09874 1014 aaKnown RBP12.84□□□□□ -0.35
USP6NL-201ENST00000277575 NF2P35240 595 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 NOP2P46087 812 aaKnown RBP12.84□□□□□ -0.35
USP6NL-201ENST00000277575 DTHD1Q6ZMT9 781 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 BICD1Q96G01 975 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 TMX1Q9H3N1 280 aa12.84□□□□□ -0.35
USP6NL-201ENST00000277575 MROH5Q6ZUA9 1318 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms