RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PTPDC1A2A3K4 754 aa15.75■□□□□ 0.11
NPC1-201ENST00000269228 PRDM1O75626 825 aa15.75■□□□□ 0.11
NPC1-201ENST00000269228 FGFR1OPO95684 399 aaKnown RBP15.75■□□□□ 0.11
NPC1-201ENST00000269228 TNNI2P48788 182 aa15.75■□□□□ 0.11
NPC1-201ENST00000269228 USPL1Q5W0Q7 1092 aa15.75■□□□□ 0.11
NPC1-201ENST00000269228 CACNA2D4Q7Z3S7 1137 aa15.75■□□□□ 0.11
NPC1-201ENST00000269228 KIAA1328Q86T90 577 aa15.75■□□□□ 0.11
NPC1-201ENST00000269228 PLS1Q14651 629 aa15.75■□□□□ 0.11
NPC1-201ENST00000269228 ANKARQ7Z5J8 1434 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 CLTCL1P53675 1640 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 TRIM37O94972 964 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 BMP15O95972 392 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 F13A1P00488 732 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 ARHGAP29Q52LW3 1261 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 PYM1Q9BRP8 204 aaKnown RBP15.74■□□□□ 0.11
NPC1-201ENST00000269228 ZBTB1Q9Y2K1 713 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 AOX1Q06278 1338 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 DNM1Q05193 864 aaKnown RBP15.74■□□□□ 0.11
NPC1-201ENST00000269228 RAB3GAP1Q15042 981 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 ENOX2Q16206 610 aaKnown RBP15.74■□□□□ 0.11
NPC1-201ENST00000269228 KANK3Q6NY19 840 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 ZBTB38Q8NAP3 1195 aaPredicted RBP15.74■□□□□ 0.11
NPC1-201ENST00000269228 KCNG4Q8TDN1 519 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 MYO6Q9UM54 1294 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 PRAMEF22A3QJZ6 481 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 TOP1P11387 765 aaKnown RBP15.74■□□□□ 0.11
NPC1-201ENST00000269228 KCNQ4P56696 695 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 STX1AQ16623 288 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 PODXL2Q9NZ53 605 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 USP25Q9UHP3 1055 aa15.74■□□□□ 0.11
NPC1-201ENST00000269228 MAP3K15Q6ZN16 1313 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 AFMP43652 599 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 MTIF2P46199 727 aaKnown RBP15.73■□□□□ 0.11
NPC1-201ENST00000269228 CDR1P51861 262 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 TCERG1LQ5VWI1 586 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 ERMNQ8TAM6 284 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 CPLX3Q8WVH0 158 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 MPHOSPH6Q99547 160 aaKnown RBP15.73■□□□□ 0.11
NPC1-201ENST00000269228 CLASP1Q7Z460 1538 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 SLC27A2O14975 620 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 ALDH1B1P30837 517 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 SSH3Q8TE77 659 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 TRIM75PA6NK02 468 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 PCCAP05165 728 aaPredicted RBP15.73■□□□□ 0.11
NPC1-201ENST00000269228 CALML3P27482 149 aa15.73■□□□□ 0.11
NPC1-201ENST00000269228 EDC3Q96F86 508 aaKnown RBP15.73■□□□□ 0.11
NPC1-201ENST00000269228 SGSM2O43147 1006 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 ZNF165P49910 485 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 SPATA31A3Q5VYP0 1347 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 USP48Q86UV5 1035 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 CCDC112Q8NEF3 446 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 EIF6P56537 245 aaKnown RBP15.72■□□□□ 0.11
NPC1-201ENST00000269228 SKIDA1Q1XH10 827 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 CCDC40Q4G0X9 1142 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 GIMAP6Q6P9H5 292 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 ZNF532Q9HCE3 1301 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 SPDYE3A6NKU9 549 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 TEX35Q5T0J7 233 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 FLAD1Q8NFF5 587 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 MAST3O60307 1309 aa15.72■□□□□ 0.11
NPC1-201ENST00000269228 TBCAO75347 108 aaKnown RBP15.71■□□□□ 0.11
NPC1-201ENST00000269228 ECM2O94769 699 aaPredicted RBP15.71■□□□□ 0.11
NPC1-201ENST00000269228 SSR1P43307 286 aaKnown RBP15.71■□□□□ 0.11
NPC1-201ENST00000269228 SYCP3Q8IZU3 236 aa15.71■□□□□ 0.11
NPC1-201ENST00000269228 CLIP2Q9UDT6 1046 aa15.71■□□□□ 0.11
NPC1-201ENST00000269228 PARP1P09874 1014 aaKnown RBP15.71■□□□□ 0.11
NPC1-201ENST00000269228 STAT6P42226 847 aa15.71■□□□□ 0.11
NPC1-201ENST00000269228 KLHL40Q2TBA0 621 aa15.71■□□□□ 0.11
NPC1-201ENST00000269228 MRPS27Q92552 414 aaKnown RBP15.71■□□□□ 0.11
NPC1-201ENST00000269228 KIF24Q5T7B8 1368 aa15.71■□□□□ 0.11
NPC1-201ENST00000269228 RPS6KB1P23443 525 aa15.71■□□□□ 0.1
NPC1-201ENST00000269228 PDE6BP35913 854 aa15.71■□□□□ 0.1
NPC1-201ENST00000269228 ERCC4Q92889 916 aaPredicted RBP15.71■□□□□ 0.1
NPC1-201ENST00000269228 FAM196AQ6ZSG2 479 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 KDM2BQ8NHM5 1336 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 ATP5JP18859 108 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 EAF2Q96CJ1 260 aaPredicted RBP15.7■□□□□ 0.1
NPC1-201ENST00000269228 RNF17Q9BXT8 1623 aaKnown RBP15.7■□□□□ 0.1
NPC1-201ENST00000269228 POTEJP0CG39 1038 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 KRT2P35908 639 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 LRRC24Q50LG9 513 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 SUPT20HQ8NEM7 779 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 LRRC27Q9C0I9 530 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 RXRBP28702 533 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 IL6STP40189 918 aaPredicted RBP15.7■□□□□ 0.1
NPC1-201ENST00000269228 SPA17Q15506 151 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 STXBP4Q6ZWJ1 553 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 UNC5CLQ8IV45 518 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 NUP88Q99567 741 aaPredicted RBP15.7■□□□□ 0.1
NPC1-201ENST00000269228 GPCPD1Q9NPB8 672 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 ADGRL3Q9HAR2 1447 aa15.7■□□□□ 0.1
NPC1-201ENST00000269228 SPTLC2O15270 562 aa15.69■□□□□ 0.1
NPC1-201ENST00000269228 PPIP5K2O43314 1243 aa15.69■□□□□ 0.1
NPC1-201ENST00000269228 GYG1P46976 350 aa15.69■□□□□ 0.1
NPC1-201ENST00000269228 ZNF772Q68DY9 489 aaPredicted RBP15.69■□□□□ 0.1
NPC1-201ENST00000269228 EXOC1Q9NV70 894 aa15.69■□□□□ 0.1
NPC1-201ENST00000269228 SNX14Q9Y5W7 946 aa15.69■□□□□ 0.1
NPC1-201ENST00000269228 GTF2IP78347 998 aa15.69■□□□□ 0.1
NPC1-201ENST00000269228 GIGYF2Q6Y7W6 1299 aaKnown RBP15.69■□□□□ 0.1
NPC1-201ENST00000269228 MAPKAPK5Q8IW41 473 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms