RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SPTLC2O15270 562 aa22.93■■□□□ 1.26
CSPG5-201ENST00000264723 MAGEB6Q8N7X4 407 aa22.93■■□□□ 1.26
CSPG5-201ENST00000264723 ZKSCAN3Q9BRR0 538 aa22.93■■□□□ 1.26
CSPG5-201ENST00000264723 ZSWIM4Q9H7M6 989 aa22.93■■□□□ 1.26
CSPG5-201ENST00000264723 ZSCAN29Q8IWY8 852 aaPredicted RBP22.93■■□□□ 1.26
CSPG5-201ENST00000264723 UQCRFS1P1P0C7P4 283 aa22.92■■□□□ 1.26
CSPG5-201ENST00000264723 IQCA1Q86XH1 822 aa22.92■■□□□ 1.26
CSPG5-201ENST00000264723 CLTCQ00610 1675 aaKnown RBP22.92■■□□□ 1.26
CSPG5-201ENST00000264723 SYKP43405 635 aa22.92■■□□□ 1.26
CSPG5-201ENST00000264723 PDE4CQ08493 712 aa22.92■■□□□ 1.26
CSPG5-201ENST00000264723 E7EWF7 191 aa22.92■■□□□ 1.26
CSPG5-201ENST00000264723 RFC4P35249 363 aa22.92■■□□□ 1.26
CSPG5-201ENST00000264723 ZAP70P43403 619 aa22.92■■□□□ 1.26
CSPG5-201ENST00000264723 PTPN21Q16825 1174 aa22.92■■□□□ 1.26
CSPG5-201ENST00000264723 GJB4Q9NTQ9 266 aa22.92■■□□□ 1.26
CSPG5-201ENST00000264723 ZNF335Q9H4Z2 1342 aaPredicted RBP22.91■■□□□ 1.26
CSPG5-201ENST00000264723 ADGRB2O60241 1585 aa22.91■■□□□ 1.26
CSPG5-201ENST00000264723 SMTNL1A8MU46 457 aa22.91■■□□□ 1.26
CSPG5-201ENST00000264723 SNW1Q13573 536 aaKnown RBP22.91■■□□□ 1.26
CSPG5-201ENST00000264723 SETDB2Q96T68 719 aa22.91■■□□□ 1.26
CSPG5-201ENST00000264723 KCNQ4P56696 695 aa22.9■■□□□ 1.26
CSPG5-201ENST00000264723 PI16Q6UXB8 463 aa22.9■■□□□ 1.26
CSPG5-201ENST00000264723 PHKBQ93100 1093 aa22.9■■□□□ 1.26
CSPG5-201ENST00000264723 TCIRG1Q13488 830 aa22.9■■□□□ 1.26
CSPG5-201ENST00000264723 FAM98CQ17RN3 349 aaKnown RBP22.9■■□□□ 1.26
CSPG5-201ENST00000264723 SKIDA1Q1XH10 827 aa22.9■■□□□ 1.26
CSPG5-201ENST00000264723 CCDC47Q96A33 483 aaKnown RBP22.9■■□□□ 1.26
CSPG5-201ENST00000264723 ADCY9O60503 1353 aa22.9■■□□□ 1.26
CSPG5-201ENST00000264723 ARHGEF28Q8N1W1 1705 aaKnown RBP22.9■■□□□ 1.26
CSPG5-201ENST00000264723 LMTK3Q96Q04 1460 aa22.9■■□□□ 1.26
CSPG5-201ENST00000264723 TOP1P11387 765 aaKnown RBP22.9■■□□□ 1.26
CSPG5-201ENST00000264723 ADAMTS13Q76LX8 1427 aa22.89■■□□□ 1.26
CSPG5-201ENST00000264723 ZBTB43O43298 467 aa22.89■■□□□ 1.26
CSPG5-201ENST00000264723 TOM1O60784 492 aa22.89■■□□□ 1.26
CSPG5-201ENST00000264723 UBXN4Q92575 508 aa22.89■■□□□ 1.26
CSPG5-201ENST00000264723 SSRP1Q08945 709 aaKnown RBP22.89■■□□□ 1.25
CSPG5-201ENST00000264723 ARID5BQ14865 1188 aa22.89■■□□□ 1.25
CSPG5-201ENST00000264723 AK7Q96M32 723 aa22.89■■□□□ 1.25
CSPG5-201ENST00000264723 NLRP3Q96P20 1036 aa22.89■■□□□ 1.25
CSPG5-201ENST00000264723 PTPN12Q05209 780 aaKnown RBP22.89■■□□□ 1.25
CSPG5-201ENST00000264723 SH3TC1Q8TE82 1336 aa22.88■■□□□ 1.25
CSPG5-201ENST00000264723 B4E1Z4 1266 aa22.88■■□□□ 1.25
CSPG5-201ENST00000264723 CTCFLQ8NI51 663 aaPredicted RBP22.88■■□□□ 1.25
CSPG5-201ENST00000264723 CCDC94Q9BW85 323 aaPredicted RBP22.88■■□□□ 1.25
CSPG5-201ENST00000264723 ARGLU1Q9NWB6 273 aaPredicted RBP22.88■■□□□ 1.25
CSPG5-201ENST00000264723 DNAI1Q9UI46 699 aa22.88■■□□□ 1.25
CSPG5-201ENST00000264723 EPB41L2O43491 1005 aaKnown RBP22.88■■□□□ 1.25
CSPG5-201ENST00000264723 TOB2Q14106 344 aaPredicted RBP22.88■■□□□ 1.25
CSPG5-201ENST00000264723 ERVV-2B6SEH9 535 aa22.87■■□□□ 1.25
CSPG5-201ENST00000264723 HSPD1P10809 573 aaKnown RBP22.87■■□□□ 1.25
CSPG5-201ENST00000264723 FAM160A1Q05DH4 1040 aa22.87■■□□□ 1.25
CSPG5-201ENST00000264723 DHX8Q14562 1220 aaKnown RBP22.87■■□□□ 1.25
CSPG5-201ENST00000264723 RPGRQ92834 1020 aaKnown RBP22.87■■□□□ 1.25
CSPG5-201ENST00000264723 TRERF1Q96PN7 1200 aa22.87■■□□□ 1.25
CSPG5-201ENST00000264723 RPAP1Q9BWH6 1393 aaPredicted RBP22.87■■□□□ 1.25
CSPG5-201ENST00000264723 UBASH3AP57075 661 aa22.87■■□□□ 1.25
CSPG5-201ENST00000264723 CCDC196A0A1B0GTZ2 297 aa22.87■■□□□ 1.25
CSPG5-201ENST00000264723 TSPY2A6NKD2 308 aa22.87■■□□□ 1.25
CSPG5-201ENST00000264723 GPAA1O43292 621 aa22.87■■□□□ 1.25
CSPG5-201ENST00000264723 MBD4O95243 580 aa22.87■■□□□ 1.25
CSPG5-201ENST00000264723 WASF1Q92558 559 aa22.87■■□□□ 1.25
CSPG5-201ENST00000264723 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.87■■□□□ 1.25
CSPG5-201ENST00000264723 POLR3GO15318 223 aaPredicted RBP22.86■■□□□ 1.25
CSPG5-201ENST00000264723 ADORA1P30542 326 aa22.86■■□□□ 1.25
CSPG5-201ENST00000264723 SYT10Q6XYQ8 523 aa22.86■■□□□ 1.25
CSPG5-201ENST00000264723 RNF41Q9H4P4 317 aaPredicted RBP22.86■■□□□ 1.25
CSPG5-201ENST00000264723 TXLNAP40222 546 aa22.86■■□□□ 1.25
CSPG5-201ENST00000264723 WTAPQ15007 396 aa22.86■■□□□ 1.25
CSPG5-201ENST00000264723 C11orf57Q6ZUT1 292 aaPredicted RBP22.86■■□□□ 1.25
CSPG5-201ENST00000264723 STX8Q9UNK0 236 aa22.86■■□□□ 1.25
CSPG5-201ENST00000264723 VAT1LQ9HCJ6 419 aa22.85■■□□□ 1.25
CSPG5-201ENST00000264723 ADD1P35611 737 aaKnown RBP22.85■■□□□ 1.25
CSPG5-201ENST00000264723 MAPK8IP2Q13387 824 aaPredicted RBP22.85■■□□□ 1.25
CSPG5-201ENST00000264723 OVOS2A0A0J9YW53 1432 aa22.85■■□□□ 1.25
CSPG5-201ENST00000264723 OVOS2Q6IE36 1432 aa22.85■■□□□ 1.25
CSPG5-201ENST00000264723 KCNG4Q8TDN1 519 aa22.85■■□□□ 1.25
CSPG5-201ENST00000264723 AFMP43652 599 aa22.84■■□□□ 1.25
CSPG5-201ENST00000264723 TEX35Q5T0J7 233 aa22.84■■□□□ 1.25
CSPG5-201ENST00000264723 BRINP3Q76B58 766 aa22.84■■□□□ 1.25
CSPG5-201ENST00000264723 CACTINQ8WUQ7 758 aaKnown RBP22.84■■□□□ 1.25
CSPG5-201ENST00000264723 IPO7O95373 1038 aaKnown RBP22.84■■□□□ 1.25
CSPG5-201ENST00000264723 NAA16Q6N069 864 aaPredicted RBP22.84■■□□□ 1.25
CSPG5-201ENST00000264723 KIAA1524Q8TCG1 905 aa22.84■■□□□ 1.25
CSPG5-201ENST00000264723 COPRSQ9NQ92 184 aa22.84■■□□□ 1.25
CSPG5-201ENST00000264723 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.84■■□□□ 1.25
CSPG5-201ENST00000264723 ZBTB1Q9Y2K1 713 aa22.84■■□□□ 1.25
CSPG5-201ENST00000264723 COL9A3Q14050 684 aaPredicted RBP22.84■■□□□ 1.25
CSPG5-201ENST00000264723 FAM182BQ5T319 152 aa22.84■■□□□ 1.25
CSPG5-201ENST00000264723 PGBD1Q96JS3 809 aa22.84■■□□□ 1.25
CSPG5-201ENST00000264723 HAUS7Q99871 368 aa22.84■■□□□ 1.25
CSPG5-201ENST00000264723 GNPATO15228 680 aa22.83■■□□□ 1.25
CSPG5-201ENST00000264723 PPFIBP1Q86W92 1011 aa22.83■■□□□ 1.25
CSPG5-201ENST00000264723 ZNF444Q8N0Y2 327 aaPredicted RBP22.83■■□□□ 1.25
CSPG5-201ENST00000264723 SALL3Q9BXA9 1300 aa22.83■■□□□ 1.25
CSPG5-201ENST00000264723 USP31Q70CQ4 1352 aa22.83■■□□□ 1.25
CSPG5-201ENST00000264723 PRDM1O75626 825 aa22.83■■□□□ 1.25
CSPG5-201ENST00000264723 TERF1P54274 439 aa22.83■■□□□ 1.25
CSPG5-201ENST00000264723 NAA30Q147X3 362 aaPredicted RBP22.83■■□□□ 1.25
CSPG5-201ENST00000264723 SOGA3Q5TF21 947 aa22.83■■□□□ 1.25
CSPG5-201ENST00000264723 CATIPQ7Z7H3 387 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms