RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 MYH13Q9UKX3 1938 aa27.5■■□□□ 1.99
SMARCB1-201ENST00000263121 M0R2C6 588 aa27.5■■□□□ 1.99
SMARCB1-201ENST00000263121 UBE3CQ15386 1083 aa27.5■■□□□ 1.99
SMARCB1-201ENST00000263121 GGA1Q9UJY5 639 aa27.5■■□□□ 1.99
SMARCB1-201ENST00000263121 H0YIN7 160 aa27.49■■□□□ 1.99
SMARCB1-201ENST00000263121 SLC4A3P48751 1232 aa27.49■■□□□ 1.99
SMARCB1-201ENST00000263121 SLC9C2Q5TAH2 1124 aa27.49■■□□□ 1.99
SMARCB1-201ENST00000263121 UPF1Q92900 1129 aaKnown RBP eCLIP27.49■■□□□ 1.998e-14■■■■□ 25.9
SMARCB1-201ENST00000263121 WWC3Q9ULE0 1092 aa27.49■■□□□ 1.99
SMARCB1-201ENST00000263121 UFL1O94874 794 aa27.49■■□□□ 1.99
SMARCB1-201ENST00000263121 PDE6AP16499 860 aa27.49■■□□□ 1.99
SMARCB1-201ENST00000263121 DAXXQ9UER7 740 aaPredicted RBP27.49■■□□□ 1.99
SMARCB1-201ENST00000263121 TCRBV5S4A2TA0A5A2 114 aa27.48■■□□□ 1.99
SMARCB1-201ENST00000263121 MAP3K12Q12852 859 aa27.48■■□□□ 1.99
SMARCB1-201ENST00000263121 WASHC4Q2M389 1173 aa27.48■■□□□ 1.99
SMARCB1-201ENST00000263121 SNX14Q9Y5W7 946 aa27.48■■□□□ 1.99
SMARCB1-201ENST00000263121 RASEFQ8IZ41 740 aa27.47■■□□□ 1.99
SMARCB1-201ENST00000263121 TBC1D16Q8TBP0 767 aa27.47■■□□□ 1.99
SMARCB1-201ENST00000263121 CACNA1SQ13698 1873 aa27.47■■□□□ 1.99
SMARCB1-201ENST00000263121 PRPF40BQ6NWY9 871 aaKnown RBP27.46■■□□□ 1.99
SMARCB1-201ENST00000263121 ZNF622Q969S3 477 aaKnown RBP eCLIP27.46■■□□□ 1.99
SMARCB1-201ENST00000263121 DSCC1Q9BVC3 393 aa27.46■■□□□ 1.99
SMARCB1-201ENST00000263121 PUS7LQ9H0K6 701 aaKnown RBP27.46■■□□□ 1.99
SMARCB1-201ENST00000263121 POLLQ9UGP5 575 aa27.46■■□□□ 1.99
SMARCB1-201ENST00000263121 ZNF532Q9HCE3 1301 aa27.46■■□□□ 1.99
SMARCB1-201ENST00000263121 DUOX1Q9NRD9 1551 aa27.46■■□□□ 1.99
SMARCB1-201ENST00000263121 CD2BP2O95400 341 aaKnown RBP27.46■■□□□ 1.99
SMARCB1-201ENST00000263121 CREB3L3Q68CJ9 461 aa27.46■■□□□ 1.99
SMARCB1-201ENST00000263121 HSCBQ8IWL3 235 aa27.46■■□□□ 1.99
SMARCB1-201ENST00000263121 ZNF804AQ7Z570 1209 aa27.45■■□□□ 1.98
SMARCB1-201ENST00000263121 GPR101Q96P66 508 aaPredicted RBP27.45■■□□□ 1.98
SMARCB1-201ENST00000263121 DLEC1Q9Y238 1755 aa27.45■■□□□ 1.98
SMARCB1-201ENST00000263121 CHRNA5P30532 468 aa27.44■■□□□ 1.98
SMARCB1-201ENST00000263121 TDRD7Q8NHU6 1098 aaKnown RBP27.44■■□□□ 1.98
SMARCB1-201ENST00000263121 U3KPZ7 1027 aaPredicted RBP27.44■■□□□ 1.98
SMARCB1-201ENST00000263121 SLC27A2O14975 620 aa27.43■■□□□ 1.98
SMARCB1-201ENST00000263121 VPS53Q5VIR6 699 aa27.43■■□□□ 1.98
SMARCB1-201ENST00000263121 MAGEB6Q8N7X4 407 aa27.43■■□□□ 1.98
SMARCB1-201ENST00000263121 LRP2BPQ9P2M1 347 aa27.43■■□□□ 1.98
SMARCB1-201ENST00000263121 KIF13BQ9NQT8 1826 aa27.43■■□□□ 1.98
SMARCB1-201ENST00000263121 FRAT2O75474 233 aaPredicted RBP27.43■■□□□ 1.98
SMARCB1-201ENST00000263121 HSPD1P10809 573 aaKnown RBP27.43■■□□□ 1.98
SMARCB1-201ENST00000263121 CNKSR1Q969H4 720 aa27.43■■□□□ 1.98
SMARCB1-201ENST00000263121 SLX4Q8IY92 1834 aa27.42■■□□□ 1.98
SMARCB1-201ENST00000263121 GPAA1O43292 621 aa27.41■■□□□ 1.98
SMARCB1-201ENST00000263121 RNF20Q5VTR2 975 aa27.41■■□□□ 1.98
SMARCB1-201ENST00000263121 OLFM4Q6UX06 510 aa27.41■■□□□ 1.98
SMARCB1-201ENST00000263121 MPNDQ8N594 471 aa27.41■■□□□ 1.98
SMARCB1-201ENST00000263121 IL27Q8NEV9 243 aa27.41■■□□□ 1.98
SMARCB1-201ENST00000263121 ABCF2Q9UG63 623 aa27.41■■□□□ 1.98
SMARCB1-201ENST00000263121 C6orf229H3BNL8 230 aa27.4■■□□□ 1.98
SMARCB1-201ENST00000263121 FOXP2O15409 715 aa27.4■■□□□ 1.98
SMARCB1-201ENST00000263121 ST18O60284 1047 aa27.4■■□□□ 1.98
SMARCB1-201ENST00000263121 ZKSCAN1P17029 563 aaPredicted RBP27.4■■□□□ 1.98
SMARCB1-201ENST00000263121 ZBTB7AO95365 584 aa27.4■■□□□ 1.98
SMARCB1-201ENST00000263121 TSGA10IPQ3SY00 556 aa27.4■■□□□ 1.98
SMARCB1-201ENST00000263121 MTFR1LQ9H019 292 aa27.4■■□□□ 1.98
SMARCB1-201ENST00000263121 CD209Q9NNX6 404 aa27.4■■□□□ 1.98
SMARCB1-201ENST00000263121 MAST2Q6P0Q8 1798 aa27.39■■□□□ 1.97
SMARCB1-201ENST00000263121 IL1R1P14778 569 aa27.39■■□□□ 1.97
SMARCB1-201ENST00000263121 NEK4P51957 841 aa27.39■■□□□ 1.97
SMARCB1-201ENST00000263121 TM6SF1Q9BZW5 370 aa27.39■■□□□ 1.97
SMARCB1-201ENST00000263121 TMX4Q9H1E5 349 aaPredicted RBP27.39■■□□□ 1.97
SMARCB1-201ENST00000263121 SALL1Q9NSC2 1324 aa27.39■■□□□ 1.97
SMARCB1-201ENST00000263121 CHAF1AQ13111 956 aaPredicted RBP27.38■■□□□ 1.97
SMARCB1-201ENST00000263121 DPP8Q6V1X1 898 aaPredicted RBP27.38■■□□□ 1.97
SMARCB1-201ENST00000263121 RAI14Q9P0K7 980 aa27.38■■□□□ 1.97
SMARCB1-201ENST00000263121 K7ELQ4 463 aaPredicted RBP27.37■■□□□ 1.97
SMARCB1-201ENST00000263121 R3HDM1Q15032 1099 aaKnown RBP27.37■■□□□ 1.97
SMARCB1-201ENST00000263121 RPAP1Q9BWH6 1393 aaPredicted RBP27.37■■□□□ 1.97
SMARCB1-201ENST00000263121 ADCK5Q3MIX3 580 aa27.36■■□□□ 1.97
SMARCB1-201ENST00000263121 WDR66Q8TBY9 1149 aa27.36■■□□□ 1.97
SMARCB1-201ENST00000263121 C7orf43Q8WVR3 580 aa27.36■■□□□ 1.97
SMARCB1-201ENST00000263121 UPF3BQ9BZI7 483 aaKnown RBP27.36■■□□□ 1.97
SMARCB1-201ENST00000263121 ERICH6Q7L0X2 663 aa27.36■■□□□ 1.97
SMARCB1-201ENST00000263121 STRBPQ96SI9 672 aaKnown RBP27.36■■□□□ 1.97
SMARCB1-201ENST00000263121 TAF6LQ9Y6J9 622 aa27.36■■□□□ 1.97
SMARCB1-201ENST00000263121 SNED1Q8TER0 1413 aa27.35■■□□□ 1.97
SMARCB1-201ENST00000263121 IGSF3O75054 1194 aa27.35■■□□□ 1.97
SMARCB1-201ENST00000263121 CYP21A2P08686 494 aa27.35■■□□□ 1.97
SMARCB1-201ENST00000263121 ZNF384Q8TF68 577 aa27.35■■□□□ 1.97
SMARCB1-201ENST00000263121 AIDAQ96BJ3 306 aa27.35■■□□□ 1.97
SMARCB1-201ENST00000263121 CYP7A1P22680 504 aa27.34■■□□□ 1.97
SMARCB1-201ENST00000263121 TMED8Q6PL24 325 aaPredicted RBP27.34■■□□□ 1.97
SMARCB1-201ENST00000263121 ZGPATQ8N5A5 531 aaKnown RBP27.34■■□□□ 1.97
SMARCB1-201ENST00000263121 JAKMIP1Q96N16 626 aaKnown RBP27.34■■□□□ 1.97
SMARCB1-201ENST00000263121 ZSWIM6Q9HCJ5 1215 aa27.34■■□□□ 1.97
SMARCB1-201ENST00000263121 ATF5Q9Y2D1 282 aaPredicted RBP27.34■■□□□ 1.97
SMARCB1-201ENST00000263121 KIAA1551Q9HCM1 1747 aa27.34■■□□□ 1.97
SMARCB1-201ENST00000263121 MBD4O95243 580 aa27.33■■□□□ 1.97
SMARCB1-201ENST00000263121 ADGRA1Q86SQ6 560 aa27.33■■□□□ 1.97
SMARCB1-201ENST00000263121 NSUN4Q96CB9 384 aaKnown RBP27.33■■□□□ 1.97
SMARCB1-201ENST00000263121 CASTP20810 708 aaKnown RBP27.33■■□□□ 1.97
SMARCB1-201ENST00000263121 POLD1P28340 1107 aa27.33■■□□□ 1.97
SMARCB1-201ENST00000263121 PRDX5P30044 214 aa27.33■■□□□ 1.97
SMARCB1-201ENST00000263121 SPTY2D1Q68D10 685 aaPredicted RBP27.33■■□□□ 1.97
SMARCB1-201ENST00000263121 TTC14Q96N46 770 aa27.33■■□□□ 1.97
SMARCB1-201ENST00000263121 COA1Q9GZY4 146 aa27.33■■□□□ 1.97
SMARCB1-201ENST00000263121 JAG2Q9Y219 1238 aa27.33■■□□□ 1.97
SMARCB1-201ENST00000263121 CCDC88AQ3V6T2 1871 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms