RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 SMC1BQ8NDV3 1235 aa20.68■□□□□ 0.9
SDCBP-201ENST00000260130 FRAT2O75474 233 aaPredicted RBP20.67■□□□□ 0.9
SDCBP-201ENST00000260130 IQSEC3Q9UPP2 1182 aaPredicted RBP20.67■□□□□ 0.9
SDCBP-201ENST00000260130 FAM205AQ6ZU69 1335 aa20.67■□□□□ 0.9
SDCBP-201ENST00000260130 USP17L8P0C7I0 530 aa20.66■□□□□ 0.9
SDCBP-201ENST00000260130 FSTL1Q12841 308 aa20.66■□□□□ 0.9
SDCBP-201ENST00000260130 NEUROD6Q96NK8 337 aa20.66■□□□□ 0.9
SDCBP-201ENST00000260130 JAG2Q9Y219 1238 aa20.66■□□□□ 0.9
SDCBP-201ENST00000260130 CLEC11AQ9Y240 323 aa20.66■□□□□ 0.9
SDCBP-201ENST00000260130 EXOC6BQ9Y2D4 811 aa20.66■□□□□ 0.9
SDCBP-201ENST00000260130 HSP90AB4PQ58FF6 505 aa20.66■□□□□ 0.9
SDCBP-201ENST00000260130 PSME4Q14997 1843 aa20.65■□□□□ 0.9
SDCBP-201ENST00000260130 ADORA1P30542 326 aa20.65■□□□□ 0.9
SDCBP-201ENST00000260130 FKBP1AP62942 108 aaKnown RBP20.65■□□□□ 0.9
SDCBP-201ENST00000260130 CHADLQ6NUI6 762 aa20.65■□□□□ 0.9
SDCBP-201ENST00000260130 SAMD7Q7Z3H4 446 aa20.65■□□□□ 0.9
SDCBP-201ENST00000260130 XAGE2Q96GT9 111 aa20.65■□□□□ 0.9
SDCBP-201ENST00000260130 GPR108Q9NPR9 543 aa20.65■□□□□ 0.9
SDCBP-201ENST00000260130 ZNF280AP59817 542 aaPredicted RBP20.65■□□□□ 0.9
SDCBP-201ENST00000260130 ERC1Q8IUD2 1116 aa20.65■□□□□ 0.9
SDCBP-201ENST00000260130 CERS5Q8N5B7 392 aa20.65■□□□□ 0.9
SDCBP-201ENST00000260130 GNL3LQ9NVN8 582 aaKnown RBP20.65■□□□□ 0.9
SDCBP-201ENST00000260130 OGFOD1Q8N543 542 aa20.64■□□□□ 0.89
SDCBP-201ENST00000260130 TRPM4Q8TD43 1214 aa20.64■□□□□ 0.89
SDCBP-201ENST00000260130 HIRAP54198 1017 aaPredicted RBP20.63■□□□□ 0.89
SDCBP-201ENST00000260130 TBC1D10BQ4KMP7 808 aaPredicted RBP20.63■□□□□ 0.89
SDCBP-201ENST00000260130 TNNI3KQ59H18 835 aa20.63■□□□□ 0.89
SDCBP-201ENST00000260130 RBM26Q5T8P6 1007 aaKnown RBP20.63■□□□□ 0.89
SDCBP-201ENST00000260130 CCDC102BQ68D86 513 aa20.63■□□□□ 0.89
SDCBP-201ENST00000260130 KIAA0825Q8IV33 1275 aa20.63■□□□□ 0.89
SDCBP-201ENST00000260130 CCDC136Q96JN2 1154 aa20.63■□□□□ 0.89
SDCBP-201ENST00000260130 FPGT-TNNI3KV9GXZ4 949 aa20.63■□□□□ 0.89
SDCBP-201ENST00000260130 PHKA1P46020 1223 aa20.63■□□□□ 0.89
SDCBP-201ENST00000260130 MMP14P50281 582 aa20.63■□□□□ 0.89
SDCBP-201ENST00000260130 CHAF1AQ13111 956 aaPredicted RBP20.63■□□□□ 0.89
SDCBP-201ENST00000260130 EGFRP00533 1210 aa20.62■□□□□ 0.89
SDCBP-201ENST00000260130 MFSD14BQ5SR56 506 aa20.62■□□□□ 0.89
SDCBP-201ENST00000260130 GORABQ5T7V8 394 aa20.62■□□□□ 0.89
SDCBP-201ENST00000260130 MYOZ2Q9NPC6 264 aa20.62■□□□□ 0.89
SDCBP-201ENST00000260130 PCDHB15Q9Y5E8 787 aa20.62■□□□□ 0.89
SDCBP-201ENST00000260130 KIF4BQ2VIQ3 1234 aa20.61■□□□□ 0.89
SDCBP-201ENST00000260130 ZC3H15Q8WU90 426 aaKnown RBP20.61■□□□□ 0.89
SDCBP-201ENST00000260130 TBC1D22AQ8WUA7 517 aa20.61■□□□□ 0.89
SDCBP-201ENST00000260130 HDAC9Q9UKV0 1011 aa20.61■□□□□ 0.89
SDCBP-201ENST00000260130 ZNF646O15015 1829 aaPredicted RBP20.61■□□□□ 0.89
SDCBP-201ENST00000260130 RAB11FIP3O75154 756 aa20.61■□□□□ 0.89
SDCBP-201ENST00000260130 RHPN1Q8TCX5 695 aa20.61■□□□□ 0.89
SDCBP-201ENST00000260130 PGAP2Q9UHJ9 254 aa20.61■□□□□ 0.89
SDCBP-201ENST00000260130 SEMA3EO15041 775 aa20.6■□□□□ 0.89
SDCBP-201ENST00000260130 ZBTB22O15209 634 aa20.6■□□□□ 0.89
SDCBP-201ENST00000260130 AAMPQ13685 434 aa20.6■□□□□ 0.89
SDCBP-201ENST00000260130 DENND2AQ9ULE3 1009 aa20.6■□□□□ 0.89
SDCBP-201ENST00000260130 ADAMTSL1Q8N6G6 1762 aa20.59■□□□□ 0.89
SDCBP-201ENST00000260130 F8W031 263 aaPredicted RBP20.59■□□□□ 0.89
SDCBP-201ENST00000260130 MAP1SQ66K74 1059 aaPredicted RBP20.59■□□□□ 0.89
SDCBP-201ENST00000260130 KIF1BPQ96EK5 621 aa20.59■□□□□ 0.89
SDCBP-201ENST00000260130 APBB1O00213 710 aa20.59■□□□□ 0.89
SDCBP-201ENST00000260130 CNTROBQ8N137 903 aa20.59■□□□□ 0.89
SDCBP-201ENST00000260130 WDR66Q8TBY9 1149 aa20.59■□□□□ 0.89
SDCBP-201ENST00000260130 EAF2Q96CJ1 260 aaPredicted RBP20.59■□□□□ 0.89
SDCBP-201ENST00000260130 DBNDD2Q9BQY9 259 aa20.58■□□□□ 0.89
SDCBP-201ENST00000260130 IL1RAPL2Q9NP60 686 aa20.58■□□□□ 0.88
SDCBP-201ENST00000260130 ARAP2Q8WZ64 1704 aa20.57■□□□□ 0.88
SDCBP-201ENST00000260130 ITGBL1O95965 494 aaPredicted RBP20.57■□□□□ 0.88
SDCBP-201ENST00000260130 EXOC6Q8TAG9 804 aa20.57■□□□□ 0.88
SDCBP-201ENST00000260130 CCDC8Q9H0W5 538 aaPredicted RBP20.57■□□□□ 0.88
SDCBP-201ENST00000260130 DCTPP1Q9H773 170 aa20.57■□□□□ 0.88
SDCBP-201ENST00000260130 RASGRF1Q13972 1273 aa20.56■□□□□ 0.88
SDCBP-201ENST00000260130 SCARF1Q14162 830 aa20.56■□□□□ 0.88
SDCBP-201ENST00000260130 CCDC158Q5M9N0 1113 aa20.56■□□□□ 0.88
SDCBP-201ENST00000260130 TTF2Q9UNY4 1162 aaKnown RBP20.56■□□□□ 0.88
SDCBP-201ENST00000260130 CLASRPQ8N2M8 674 aaKnown RBP20.56■□□□□ 0.88
SDCBP-201ENST00000260130 DBNLQ9UJU6 430 aaKnown RBP20.56■□□□□ 0.88
SDCBP-201ENST00000260130 SUGT1Q9Y2Z0 365 aa20.56■□□□□ 0.88
SDCBP-201ENST00000260130 COL1A1P02452 1464 aaPredicted RBP20.56■□□□□ 0.88
SDCBP-201ENST00000260130 UQCRFS1P1P0C7P4 283 aa20.55■□□□□ 0.88
SDCBP-201ENST00000260130 GRIK5Q16478 980 aa20.55■□□□□ 0.88
SDCBP-201ENST00000260130 AACSQ86V21 672 aa20.55■□□□□ 0.88
SDCBP-201ENST00000260130 WNT10BO00744 389 aa20.55■□□□□ 0.88
SDCBP-201ENST00000260130 HSPA6P17066 643 aa20.55■□□□□ 0.88
SDCBP-201ENST00000260130 ARID4AP29374 1257 aaPredicted RBP20.55■□□□□ 0.88
SDCBP-201ENST00000260130 NBPF9Q3BBW0 867 aa20.55■□□□□ 0.88
SDCBP-201ENST00000260130 TLR7Q9NYK1 1049 aaKnown RBP20.55■□□□□ 0.88
SDCBP-201ENST00000260130 PDS5AQ29RF7 1337 aaKnown RBP20.54■□□□□ 0.88
SDCBP-201ENST00000260130 DLGAP5Q15398 846 aa20.54■□□□□ 0.88
SDCBP-201ENST00000260130 TTC39AQ5SRH9 613 aa20.54■□□□□ 0.88
SDCBP-201ENST00000260130 MTMR14Q8NCE2 650 aa20.54■□□□□ 0.88
SDCBP-201ENST00000260130 DCPSQ96C86 337 aaKnown RBP20.54■□□□□ 0.88
SDCBP-201ENST00000260130 SALL1Q9NSC2 1324 aa20.54■□□□□ 0.88
SDCBP-201ENST00000260130 CFAP100Q494V2 611 aa20.53■□□□□ 0.88
SDCBP-201ENST00000260130 CDC37L1Q7L3B6 337 aa20.53■□□□□ 0.88
SDCBP-201ENST00000260130 ZBED3Q96IU2 234 aaPredicted RBP20.53■□□□□ 0.88
SDCBP-201ENST00000260130 LRRCC1Q9C099 1032 aa20.53■□□□□ 0.88
SDCBP-201ENST00000260130 HMG20BQ9P0W2 317 aa20.53■□□□□ 0.88
SDCBP-201ENST00000260130 ASTN2O75129 1339 aaPredicted RBP20.53■□□□□ 0.88
SDCBP-201ENST00000260130 PASKQ96RG2 1323 aa20.53■□□□□ 0.88
SDCBP-201ENST00000260130 GGA3Q9NZ52 723 aa20.53■□□□□ 0.88
SDCBP-201ENST00000260130 SERPINA10Q9UK55 444 aa20.53■□□□□ 0.88
SDCBP-201ENST00000260130 RBM5P52756 815 aaKnown RBP eCLIP20.52■□□□□ 0.88
SDCBP-201ENST00000260130 ANGEL2Q5VTE6 544 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms