RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 FBXO38Q6PIJ6 1188 aa22.11■■□□□ 1.13
SNX4-201ENST00000251775 MAST3O60307 1309 aa22.1■■□□□ 1.13
SNX4-201ENST00000251775 CEP126Q9P2H0 1117 aa22.1■■□□□ 1.13
SNX4-201ENST00000251775 CCDC69A6NI79 296 aa22.1■■□□□ 1.13
SNX4-201ENST00000251775 RNF113AO15541 343 aaKnown RBP22.1■■□□□ 1.13
SNX4-201ENST00000251775 HSPD1P10809 573 aaKnown RBP22.1■■□□□ 1.13
SNX4-201ENST00000251775 SCRN1Q12765 414 aa22.1■■□□□ 1.13
SNX4-201ENST00000251775 CCDC57Q2TAC2 916 aa22.1■■□□□ 1.13
SNX4-201ENST00000251775 PIGBQ92521 554 aa22.1■■□□□ 1.13
SNX4-201ENST00000251775 ERO1AQ96HE7 468 aa22.1■■□□□ 1.13
SNX4-201ENST00000251775 CCDC85AQ96PX6 553 aaPredicted RBP22.1■■□□□ 1.13
SNX4-201ENST00000251775 ELF2Q15723 593 aa22.09■■□□□ 1.13
SNX4-201ENST00000251775 DHX32Q7L7V1 743 aaKnown RBP22.09■■□□□ 1.13
SNX4-201ENST00000251775 DDX11Q96FC9 970 aa22.09■■□□□ 1.13
SNX4-201ENST00000251775 FAM89AQ96GI7 184 aa22.09■■□□□ 1.13
SNX4-201ENST00000251775 ADORA1P30542 326 aa22.09■■□□□ 1.13
SNX4-201ENST00000251775 TRIM28Q13263 835 aaKnown RBP22.09■■□□□ 1.13
SNX4-201ENST00000251775 TICAM2Q86XR7 235 aa22.09■■□□□ 1.13
SNX4-201ENST00000251775 STX1AQ16623 288 aa22.08■■□□□ 1.13
SNX4-201ENST00000251775 CCAR2Q8N163 923 aaKnown RBP22.08■■□□□ 1.13
SNX4-201ENST00000251775 TRMT1Q9NXH9 659 aaKnown RBP22.08■■□□□ 1.13
SNX4-201ENST00000251775 ITGB4P16144 1822 aa22.08■■□□□ 1.13
SNX4-201ENST00000251775 M0R2C6 588 aa22.08■■□□□ 1.12
SNX4-201ENST00000251775 HMGB1P09429 215 aaKnown RBP22.08■■□□□ 1.12
SNX4-201ENST00000251775 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.08■■□□□ 1.12
SNX4-201ENST00000251775 PCCAP05165 728 aaPredicted RBP22.07■■□□□ 1.12
SNX4-201ENST00000251775 FGD1P98174 961 aa22.07■■□□□ 1.12
SNX4-201ENST00000251775 EXOSC10Q01780 885 aaKnown RBP22.07■■□□□ 1.12
SNX4-201ENST00000251775 FILIP1Q7Z7B0 1213 aa22.07■■□□□ 1.12
SNX4-201ENST00000251775 PFKFB2O60825 505 aa22.07■■□□□ 1.12
SNX4-201ENST00000251775 FKBP4Q02790 459 aaKnown RBP eCLIP22.07■■□□□ 1.12
SNX4-201ENST00000251775 DHX40Q8IX18 779 aaKnown RBP22.07■■□□□ 1.12
SNX4-201ENST00000251775 E7EWF7 191 aa22.06■■□□□ 1.12
SNX4-201ENST00000251775 SMARCC2Q8TAQ2 1214 aa22.06■■□□□ 1.12
SNX4-201ENST00000251775 OSBP2Q969R2 916 aa22.06■■□□□ 1.12
SNX4-201ENST00000251775 XAGE2Q96GT9 111 aa22.06■■□□□ 1.12
SNX4-201ENST00000251775 KCND1Q9NSA2 647 aa22.06■■□□□ 1.12
SNX4-201ENST00000251775 CFAP45Q9UL16 551 aa22.06■■□□□ 1.12
SNX4-201ENST00000251775 APOBRQ0VD83 1088 aa22.06■■□□□ 1.12
SNX4-201ENST00000251775 KIF6Q6ZMV9 814 aa22.06■■□□□ 1.12
SNX4-201ENST00000251775 SYNE4Q8N205 404 aa22.06■■□□□ 1.12
SNX4-201ENST00000251775 ZSCAN16Q9H4T2 348 aaPredicted RBP22.06■■□□□ 1.12
SNX4-201ENST00000251775 A0A087WWV3 80 aa22.05■■□□□ 1.12
SNX4-201ENST00000251775 CTAGE5O15320 804 aa22.05■■□□□ 1.12
SNX4-201ENST00000251775 SLU7O95391 586 aaKnown RBP22.05■■□□□ 1.12
SNX4-201ENST00000251775 CSF1RP07333 972 aa22.05■■□□□ 1.12
SNX4-201ENST00000251775 ADD1P35611 737 aaKnown RBP22.05■■□□□ 1.12
SNX4-201ENST00000251775 CEBPZQ03701 1054 aaKnown RBP22.05■■□□□ 1.12
SNX4-201ENST00000251775 TTLL5Q6EMB2 1281 aa22.05■■□□□ 1.12
SNX4-201ENST00000251775 PLA2G12BQ9BX93 195 aa22.05■■□□□ 1.12
SNX4-201ENST00000251775 AGXT2Q9BYV1 514 aa22.05■■□□□ 1.12
SNX4-201ENST00000251775 GOLPH3LQ9H4A5 285 aa22.05■■□□□ 1.12
SNX4-201ENST00000251775 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.05■■□□□ 1.12
SNX4-201ENST00000251775 CCDC158Q5M9N0 1113 aa22.05■■□□□ 1.12
SNX4-201ENST00000251775 TEX13AQ9BXU3 409 aaPredicted RBP22.05■■□□□ 1.12
SNX4-201ENST00000251775 FBXO3Q9UK99 471 aa22.05■■□□□ 1.12
SNX4-201ENST00000251775 NHSL1Q5SYE7 1610 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 BECN2A8MW95 431 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 H3BQV1 296 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 CTDNEP1O95476 244 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 SCARF1Q14162 830 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 TTC39AQ5SRH9 613 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 IFFO2Q5TF58 517 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 CCAR1Q8IX12 1150 aaKnown RBP22.04■■□□□ 1.12
SNX4-201ENST00000251775 ZBTB38Q8NAP3 1195 aaPredicted RBP22.04■■□□□ 1.12
SNX4-201ENST00000251775 NSUN7Q8NE18 718 aaKnown RBP22.04■■□□□ 1.12
SNX4-201ENST00000251775 TMEM51Q9NW97 253 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 ZNF446Q9NWS9 450 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.04■■□□□ 1.12
SNX4-201ENST00000251775 SNW1Q13573 536 aaKnown RBP22.04■■□□□ 1.12
SNX4-201ENST00000251775 HLFQ16534 295 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 GORABQ5T7V8 394 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 LLPHQ9BRT6 129 aaKnown RBP22.04■■□□□ 1.12
SNX4-201ENST00000251775 AKAP2Q9Y2D5 859 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 KAT6BQ8WYB5 2073 aa22.04■■□□□ 1.12
SNX4-201ENST00000251775 NWD2Q9ULI1 1742 aa22.03■■□□□ 1.12
SNX4-201ENST00000251775 ST7Q9NRC1 585 aa22.03■■□□□ 1.12
SNX4-201ENST00000251775 GTF2E1P29083 439 aaPredicted RBP22.03■■□□□ 1.12
SNX4-201ENST00000251775 GIGYF2Q6Y7W6 1299 aaKnown RBP22.03■■□□□ 1.12
SNX4-201ENST00000251775 CHST3Q7LGC8 479 aa22.03■■□□□ 1.12
SNX4-201ENST00000251775 FTOQ9C0B1 505 aaKnown RBP eCLIP22.03■■□□□ 1.12
SNX4-201ENST00000251775 RCOR1Q9UKL0 485 aa22.03■■□□□ 1.12
SNX4-201ENST00000251775 MAP3K15Q6ZN16 1313 aa22.03■■□□□ 1.12
SNX4-201ENST00000251775 MYH15Q9Y2K3 1946 aa22.02■■□□□ 1.12
SNX4-201ENST00000251775 FOXP2O15409 715 aa22.02■■□□□ 1.12
SNX4-201ENST00000251775 STARD3NLO95772 234 aa22.02■■□□□ 1.12
SNX4-201ENST00000251775 IFIT5Q13325 482 aaKnown RBP22.02■■□□□ 1.12
SNX4-201ENST00000251775 TAF7LQ5H9L4 462 aa22.02■■□□□ 1.12
SNX4-201ENST00000251775 BTG4Q9NY30 223 aa22.02■■□□□ 1.12
SNX4-201ENST00000251775 CCDC66A2RUB6 948 aa22.02■■□□□ 1.11
SNX4-201ENST00000251775 GPTP24298 496 aa22.02■■□□□ 1.11
SNX4-201ENST00000251775 CCT2P78371 535 aaKnown RBP22.02■■□□□ 1.11
SNX4-201ENST00000251775 BBXQ8WY36 941 aaPredicted RBP22.02■■□□□ 1.11
SNX4-201ENST00000251775 KIF2AO00139 706 aaPredicted RBP22.01■■□□□ 1.11
SNX4-201ENST00000251775 ZBTB22O15209 634 aa22.01■■□□□ 1.11
SNX4-201ENST00000251775 ZAP70P43403 619 aa22.01■■□□□ 1.11
SNX4-201ENST00000251775 NBPF11Q86T75 865 aa22.01■■□□□ 1.11
SNX4-201ENST00000251775 SLC4A9Q96Q91 983 aa22.01■■□□□ 1.11
SNX4-201ENST00000251775 ANO10Q9NW15 660 aa22.01■■□□□ 1.11
SNX4-201ENST00000251775 MYH7P12883 1935 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms