RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 CLSTN2Q9H4D0 955 aa15.3■□□□□ 0.04
CCDC117-201ENST00000249064 ALDH1L1O75891 902 aa15.3■□□□□ 0.04
CCDC117-201ENST00000249064 MARCKSP29966 332 aaPredicted RBP15.3■□□□□ 0.04
CCDC117-201ENST00000249064 DNA2P51530 1060 aa15.3■□□□□ 0.04
CCDC117-201ENST00000249064 NCOA5Q9HCD5 579 aaKnown RBP15.3■□□□□ 0.04
CCDC117-201ENST00000249064 TTC41PQ6P2S7 1318 aa15.29■□□□□ 0.04
CCDC117-201ENST00000249064 MATR3P43243 847 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC117-201ENST00000249064 VPS53Q5VIR6 699 aa15.29■□□□□ 0.04
CCDC117-201ENST00000249064 CCDC91Q7Z6B0 441 aa15.29■□□□□ 0.04
CCDC117-201ENST00000249064 ZNF496Q96IT1 587 aaPredicted RBP15.29■□□□□ 0.04
CCDC117-201ENST00000249064 ZNF594Q96JF6 807 aaPredicted RBP15.29■□□□□ 0.04
CCDC117-201ENST00000249064 SHTN1A0MZ66 631 aa15.29■□□□□ 0.04
CCDC117-201ENST00000249064 DHX16O60231 1041 aaKnown RBP15.29■□□□□ 0.04
CCDC117-201ENST00000249064 MAP2K2P36507 400 aa15.29■□□□□ 0.04
CCDC117-201ENST00000249064 RBM6P78332 1123 aaKnown RBP15.29■□□□□ 0.04
CCDC117-201ENST00000249064 HOOK1Q9UJC3 728 aaKnown RBP15.29■□□□□ 0.04
CCDC117-201ENST00000249064 APOBRQ0VD83 1088 aa15.29■□□□□ 0.04
CCDC117-201ENST00000249064 WWC2Q6AWC2 1192 aa15.29■□□□□ 0.04
CCDC117-201ENST00000249064 GOLGA1Q92805 767 aa15.29■□□□□ 0.04
CCDC117-201ENST00000249064 FAM212AQ96EL1 285 aa15.29■□□□□ 0.04
CCDC117-201ENST00000249064 FTOQ9C0B1 505 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC117-201ENST00000249064 EPB41L2O43491 1005 aaKnown RBP15.28■□□□□ 0.04
CCDC117-201ENST00000249064 WDHD1O75717 1129 aaPredicted RBP15.28■□□□□ 0.04
CCDC117-201ENST00000249064 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
CCDC117-201ENST00000249064 IFIT1P09914 478 aaKnown RBP15.28■□□□□ 0.04
CCDC117-201ENST00000249064 NFXL1Q6ZNB6 911 aa15.28■□□□□ 0.04
CCDC117-201ENST00000249064 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.28■□□□□ 0.04
CCDC117-201ENST00000249064 ZNF589Q86UQ0 364 aaPredicted RBP15.28■□□□□ 0.04
CCDC117-201ENST00000249064 DESI2Q9BSY9 194 aa15.28■□□□□ 0.04
CCDC117-201ENST00000249064 CBFA2T2O43439 604 aa15.28■□□□□ 0.04
CCDC117-201ENST00000249064 CYP2C19P33261 490 aa15.28■□□□□ 0.04
CCDC117-201ENST00000249064 RRP12Q5JTH9 1297 aaKnown RBP15.28■□□□□ 0.04
CCDC117-201ENST00000249064 CCDC82Q8N4S0 544 aa15.28■□□□□ 0.04
CCDC117-201ENST00000249064 DDX21Q9NR30 783 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC117-201ENST00000249064 CTAGE5O15320 804 aa15.28■□□□□ 0.04
CCDC117-201ENST00000249064 GPTP24298 496 aa15.28■□□□□ 0.04
CCDC117-201ENST00000249064 OTUD7BQ6GQQ9 843 aa15.28■□□□□ 0.04
CCDC117-201ENST00000249064 TTC39AQ5SRH9 613 aa15.27■□□□□ 0.04
CCDC117-201ENST00000249064 ZNF790Q6PG37 636 aa15.27■□□□□ 0.04
CCDC117-201ENST00000249064 PRDM11Q9NQV5 511 aa15.27■□□□□ 0.04
CCDC117-201ENST00000249064 CEP126Q9P2H0 1117 aa15.27■□□□□ 0.04
CCDC117-201ENST00000249064 TMEM131LA2VDJ0 1609 aa15.27■□□□□ 0.04
CCDC117-201ENST00000249064 ZEB2O60315 1214 aa15.27■□□□□ 0.04
CCDC117-201ENST00000249064 ETF1P62495 437 aaKnown RBP15.27■□□□□ 0.04
CCDC117-201ENST00000249064 ADAM21Q9UKJ8 722 aa15.27■□□□□ 0.04
CCDC117-201ENST00000249064 EP400NLQ6ZTU2 488 aa15.27■□□□□ 0.03
CCDC117-201ENST00000249064 RGS12O14924 1447 aa15.27■□□□□ 0.03
CCDC117-201ENST00000249064 SASH1O94885 1247 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 TRIM29Q14134 588 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 SF3A3Q12874 501 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCDC117-201ENST00000249064 PPP1R13BQ96KQ4 1090 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 TAF6LQ9Y6J9 622 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 EBAG9O00559 213 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 TRDNQ13061 729 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 CCDC57Q2TAC2 916 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 TTC19Q6DKK2 380 aaPredicted RBP15.26■□□□□ 0.03
CCDC117-201ENST00000249064 EFCC1Q9HA90 598 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 FRMD3A2A2Y4 597 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 GBP6Q6ZN66 633 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 NBPF11Q86T75 865 aa15.26■□□□□ 0.03
CCDC117-201ENST00000249064 ZNF569Q5MCW4 686 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 CAPZA3Q96KX2 299 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 PREX1Q8TCU6 1659 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 IDH1O75874 414 aaKnown RBP15.25■□□□□ 0.03
CCDC117-201ENST00000249064 PDE6BP35913 854 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 KRT32Q14532 448 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 EPHA10Q5JZY3 1008 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 GOLGA5Q8TBA6 731 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 FAN1Q9Y2M0 1017 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 CLTCQ00610 1675 aaKnown RBP15.25■□□□□ 0.03
CCDC117-201ENST00000249064 CAVIN2O95810 425 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 POLA2Q14181 598 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 LONRF3Q496Y0 759 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 AXIN2Q9Y2T1 843 aa15.25■□□□□ 0.03
CCDC117-201ENST00000249064 SNRPA1P09661 255 aaKnown RBP15.24■□□□□ 0.03
CCDC117-201ENST00000249064 IFNL2Q8IZJ0 200 aa15.24■□□□□ 0.03
CCDC117-201ENST00000249064 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.24■□□□□ 0.03
CCDC117-201ENST00000249064 KNDC1Q76NI1 1749 aa15.24■□□□□ 0.03
CCDC117-201ENST00000249064 ACTN2P35609 894 aa15.24■□□□□ 0.03
CCDC117-201ENST00000249064 LCMT1Q9UIC8 334 aa15.24■□□□□ 0.03
CCDC117-201ENST00000249064 A1BGP04217 495 aa15.24■□□□□ 0.03
CCDC117-201ENST00000249064 RXRAP19793 462 aa15.24■□□□□ 0.03
CCDC117-201ENST00000249064 RPS6KB1P23443 525 aa15.24■□□□□ 0.03
CCDC117-201ENST00000249064 GCKRQ14397 625 aa15.24■□□□□ 0.03
CCDC117-201ENST00000249064 LRRFIP1Q32MZ4 808 aaKnown RBP15.24■□□□□ 0.03
CCDC117-201ENST00000249064 CCDC158Q5M9N0 1113 aa15.23■□□□□ 0.03
CCDC117-201ENST00000249064 LRRN4CLQ8ND94 238 aa15.23■□□□□ 0.03
CCDC117-201ENST00000249064 CNNM1Q9NRU3 951 aa15.23■□□□□ 0.03
CCDC117-201ENST00000249064 ADKP55263 362 aaKnown RBP15.23■□□□□ 0.03
CCDC117-201ENST00000249064 CHMP4BP1P59074 171 aa15.23■□□□□ 0.03
CCDC117-201ENST00000249064 HDXQ7Z353 690 aa15.23■□□□□ 0.03
CCDC117-201ENST00000249064 ERLIN2O94905 339 aa15.23■□□□□ 0.03
CCDC117-201ENST00000249064 NF2P35240 595 aa15.23■□□□□ 0.03
CCDC117-201ENST00000249064 SYCP1Q15431 976 aa15.23■□□□□ 0.03
CCDC117-201ENST00000249064 ZSWIM6Q9HCJ5 1215 aa15.23■□□□□ 0.03
CCDC117-201ENST00000249064 AOX1Q06278 1338 aa15.23■□□□□ 0.03
CCDC117-201ENST00000249064 CLGNO14967 610 aa15.22■□□□□ 0.03
CCDC117-201ENST00000249064 TNNI3KQ59H18 835 aa15.22■□□□□ 0.03
CCDC117-201ENST00000249064 MRPS27Q92552 414 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms