RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 ZSWIM6Q9HCJ5 1215 aa21.69■■□□□ 1.06
VIM-201ENST00000224237 IQSEC3Q9UPP2 1182 aaPredicted RBP21.69■■□□□ 1.06
VIM-201ENST00000224237 SEMA3EO15041 775 aa21.69■■□□□ 1.06
VIM-201ENST00000224237 KRT32Q14532 448 aa21.69■■□□□ 1.06
VIM-201ENST00000224237 VPS53Q5VIR6 699 aa21.69■■□□□ 1.06
VIM-201ENST00000224237 FBXO33Q7Z6M2 555 aa21.69■■□□□ 1.06
VIM-201ENST00000224237 TTC14Q96N46 770 aa21.69■■□□□ 1.06
VIM-201ENST00000224237 PUS7LQ9H0K6 701 aaKnown RBP21.69■■□□□ 1.06
VIM-201ENST00000224237 CHMP5Q9NZZ3 219 aa21.69■■□□□ 1.06
VIM-201ENST00000224237 DENND2AQ9ULE3 1009 aa21.69■■□□□ 1.06
VIM-201ENST00000224237 LEMD3Q9Y2U8 911 aa21.69■■□□□ 1.06
VIM-201ENST00000224237 CYP46A1Q9Y6A2 500 aa21.69■■□□□ 1.06
VIM-201ENST00000224237 XDHP47989 1333 aa21.68■■□□□ 1.06
VIM-201ENST00000224237 PDE6AP16499 860 aa21.68■■□□□ 1.06
VIM-201ENST00000224237 DDIT3P35638 169 aa21.68■■□□□ 1.06
VIM-201ENST00000224237 CRAMP1Q96RY5 1269 aa21.68■■□□□ 1.06
VIM-201ENST00000224237 ANKIB1Q9P2G1 1089 aa21.68■■□□□ 1.06
VIM-201ENST00000224237 ZNF532Q9HCE3 1301 aa21.67■■□□□ 1.06
VIM-201ENST00000224237 BBOX1O75936 387 aa21.67■■□□□ 1.06
VIM-201ENST00000224237 RUFY3Q7L099 469 aa21.67■■□□□ 1.06
VIM-201ENST00000224237 WWC3Q9ULE0 1092 aa21.67■■□□□ 1.06
VIM-201ENST00000224237 CIZ1Q9ULV3 898 aaPredicted RBP21.67■■□□□ 1.06
VIM-201ENST00000224237 COL11A2P13942 1736 aaPredicted RBP21.67■■□□□ 1.06
VIM-201ENST00000224237 GPAA1O43292 621 aa21.66■■□□□ 1.06
VIM-201ENST00000224237 TMX3Q96JJ7 454 aa21.66■■□□□ 1.06
VIM-201ENST00000224237 MYH13Q9UKX3 1938 aa21.66■■□□□ 1.06
VIM-201ENST00000224237 PDS5AQ29RF7 1337 aaKnown RBP21.66■■□□□ 1.06
VIM-201ENST00000224237 TCRBV5S4A2TA0A5A2 114 aa21.66■■□□□ 1.06
VIM-201ENST00000224237 ZBTB22O15209 634 aa21.66■■□□□ 1.06
VIM-201ENST00000224237 HIBADHP31937 336 aaKnown RBP21.66■■□□□ 1.06
VIM-201ENST00000224237 COL1A1P02452 1464 aaPredicted RBP21.65■■□□□ 1.06
VIM-201ENST00000224237 CYP21A2P08686 494 aa21.65■■□□□ 1.06
VIM-201ENST00000224237 TMC4Q7Z404 712 aa21.65■■□□□ 1.06
VIM-201ENST00000224237 IRS2Q9Y4H2 1338 aa21.65■■□□□ 1.06
VIM-201ENST00000224237 NBR1Q14596 966 aa21.64■■□□□ 1.06
VIM-201ENST00000224237 TXNRD3Q86VQ6 643 aa21.64■■□□□ 1.06
VIM-201ENST00000224237 MAGEB6Q8N7X4 407 aa21.64■■□□□ 1.06
VIM-201ENST00000224237 FOXD4L1Q9NU39 408 aa21.64■■□□□ 1.06
VIM-201ENST00000224237 PDRG1Q9NUG6 133 aa21.64■■□□□ 1.06
VIM-201ENST00000224237 LRP2BPQ9P2M1 347 aa21.64■■□□□ 1.06
VIM-201ENST00000224237 PDE6BP35913 854 aa21.64■■□□□ 1.05
VIM-201ENST00000224237 AK2P54819 239 aa21.64■■□□□ 1.05
VIM-201ENST00000224237 BLOC1S2Q6QNY1 142 aa21.64■■□□□ 1.05
VIM-201ENST00000224237 GPR101Q96P66 508 aaPredicted RBP21.64■■□□□ 1.05
VIM-201ENST00000224237 CTNNA3Q9UI47 895 aa21.64■■□□□ 1.05
VIM-201ENST00000224237 LRRC37AA6NMS7 1700 aa21.63■■□□□ 1.05
VIM-201ENST00000224237 SRGNP10124 158 aa21.63■■□□□ 1.05
VIM-201ENST00000224237 GPSM2P81274 684 aa21.63■■□□□ 1.05
VIM-201ENST00000224237 FRAT2O75474 233 aaPredicted RBP21.62■■□□□ 1.05
VIM-201ENST00000224237 CPA1P15085 419 aa21.62■■□□□ 1.05
VIM-201ENST00000224237 CUL4AQ13619 759 aa21.62■■□□□ 1.05
VIM-201ENST00000224237 NOL8Q76FK4 1167 aaKnown RBP21.62■■□□□ 1.05
VIM-201ENST00000224237 AIDAQ96BJ3 306 aa21.62■■□□□ 1.05
VIM-201ENST00000224237 CWC22Q9HCG8 908 aaKnown RBP21.62■■□□□ 1.05
VIM-201ENST00000224237 TAF6LQ9Y6J9 622 aa21.62■■□□□ 1.05
VIM-201ENST00000224237 NPR1P16066 1061 aa21.62■■□□□ 1.05
VIM-201ENST00000224237 C15orf52Q6ZUT6 534 aaKnown RBP21.62■■□□□ 1.05
VIM-201ENST00000224237 FOXP2O15409 715 aa21.61■■□□□ 1.05
VIM-201ENST00000224237 RPS6KB1P23443 525 aa21.61■■□□□ 1.05
VIM-201ENST00000224237 ATP2B4P23634 1241 aa21.61■■□□□ 1.05
VIM-201ENST00000224237 NEK1Q96PY6 1258 aa21.61■■□□□ 1.05
VIM-201ENST00000224237 PODXL2Q9NZ53 605 aa21.61■■□□□ 1.05
VIM-201ENST00000224237 ABCF2Q9UG63 623 aa21.61■■□□□ 1.05
VIM-201ENST00000224237 NSFL1CQ9UNZ2 370 aaKnown RBP21.61■■□□□ 1.05
VIM-201ENST00000224237 LIMCH1Q9UPQ0 1083 aa21.61■■□□□ 1.05
VIM-201ENST00000224237 INTS4Q96HW7 963 aaKnown RBP21.6■■□□□ 1.05
VIM-201ENST00000224237 PPEF1O14829 653 aaPredicted RBP21.6■■□□□ 1.05
VIM-201ENST00000224237 HMGB1P09429 215 aaKnown RBP21.6■■□□□ 1.05
VIM-201ENST00000224237 IMMTQ16891 758 aaKnown RBP21.6■■□□□ 1.05
VIM-201ENST00000224237 ALDH8A1Q9H2A2 487 aaPredicted RBP21.6■■□□□ 1.05
VIM-201ENST00000224237 GGA1Q9UJY5 639 aa21.6■■□□□ 1.05
VIM-201ENST00000224237 FGAP02671 866 aa21.59■■□□□ 1.05
VIM-201ENST00000224237 ALDH1B1P30837 517 aa21.59■■□□□ 1.05
VIM-201ENST00000224237 ANKRD1Q15327 319 aa21.59■■□□□ 1.05
VIM-201ENST00000224237 NFKBIBQ15653 356 aa21.59■■□□□ 1.05
VIM-201ENST00000224237 OLFM4Q6UX06 510 aa21.59■■□□□ 1.05
VIM-201ENST00000224237 ZNF804AQ7Z570 1209 aa21.59■■□□□ 1.05
VIM-201ENST00000224237 RAI14Q9P0K7 980 aa21.59■■□□□ 1.05
VIM-201ENST00000224237 UFL1O94874 794 aa21.58■■□□□ 1.05
VIM-201ENST00000224237 SP8Q8IXZ3 490 aa21.58■■□□□ 1.05
VIM-201ENST00000224237 STRBPQ96SI9 672 aaKnown RBP21.58■■□□□ 1.05
VIM-201ENST00000224237 CACNA1SQ13698 1873 aa21.58■■□□□ 1.05
VIM-201ENST00000224237 LTBP1Q14766 1721 aa21.58■■□□□ 1.04
VIM-201ENST00000224237 CCDC125Q86Z20 511 aa21.58■■□□□ 1.04
VIM-201ENST00000224237 MASTLQ96GX5 879 aa21.58■■□□□ 1.04
VIM-201ENST00000224237 ZMYM6O95789 1325 aa21.57■■□□□ 1.04
VIM-201ENST00000224237 MBD4O95243 580 aa21.57■■□□□ 1.04
VIM-201ENST00000224237 GNAT2P19087 354 aa21.57■■□□□ 1.04
VIM-201ENST00000224237 ZGPATQ8N5A5 531 aaKnown RBP21.57■■□□□ 1.04
VIM-201ENST00000224237 ZSCAN31Q96LW9 406 aaPredicted RBP21.57■■□□□ 1.04
VIM-201ENST00000224237 ATP6V0A2Q9Y487 856 aa21.57■■□□□ 1.04
VIM-201ENST00000224237 LAMA4Q16363 1823 aa21.56■■□□□ 1.04
VIM-201ENST00000224237 E7EWF7 191 aa21.56■■□□□ 1.04
VIM-201ENST00000224237 TTLL5Q6EMB2 1281 aa21.56■■□□□ 1.04
VIM-201ENST00000224237 TMED8Q6PL24 325 aaPredicted RBP21.56■■□□□ 1.04
VIM-201ENST00000224237 STOX1Q6ZVD7 989 aa21.56■■□□□ 1.04
VIM-201ENST00000224237 C2CD5Q86YS7 1000 aa21.56■■□□□ 1.04
VIM-201ENST00000224237 SH2B1Q9NRF2 756 aaPredicted RBP21.56■■□□□ 1.04
VIM-201ENST00000224237 MAST2Q6P0Q8 1798 aa21.56■■□□□ 1.04
VIM-201ENST00000224237 IGSF3O75054 1194 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms