RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ANO6Q4KMQ2 910 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 DHX32Q7L7V1 743 aaKnown RBP13.18□□□□□ -0.3
NOD1-201ENST00000222823 CHST3Q7LGC8 479 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 FAM114A1Q8IWE2 563 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.18□□□□□ -0.3
NOD1-201ENST00000222823 PIK3C2BO00750 1634 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 MROH1Q8NDA8 1641 aa13.18□□□□□ -0.3
NOD1-201ENST00000222823 AFMP43652 599 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 BICC1Q9H694 974 aaKnown RBP13.17□□□□□ -0.3
NOD1-201ENST00000222823 IGSF1Q8N6C5 1336 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 PRIM1P49642 420 aaKnown RBP13.17□□□□□ -0.3
NOD1-201ENST00000222823 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 CHMP4BP1P59074 171 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 HS1BP3Q53T59 392 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 KRI1Q8N9T8 703 aaKnown RBP13.17□□□□□ -0.3
NOD1-201ENST00000222823 CCDC150Q8NCX0 1101 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 LRRC27Q9C0I9 530 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 DLC1Q96QB1 1528 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 FSD2A1L4K1 749 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 SPTLC2O15270 562 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 GNG11P61952 73 aa13.17□□□□□ -0.3
NOD1-201ENST00000222823 TRIM75PA6NK02 468 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 IBSPP21815 317 aaPredicted RBP13.16□□□□□ -0.3
NOD1-201ENST00000222823 ZNF445P59923 1031 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 CCDC186Q7Z3E2 898 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 TMX1Q9H3N1 280 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 RMND1Q9NWS8 449 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 AKR1B10O60218 316 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 MCM3P25205 808 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 ZNF790Q6PG37 636 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 IL17REQ8NFR9 667 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 RAD50Q92878 1312 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 SSH2Q76I76 1423 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 USP44Q9H0E7 712 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 SAMM50Q9Y512 469 aa13.16□□□□□ -0.3
NOD1-201ENST00000222823 GNAT2P19087 354 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 TIMM10P62072 90 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 APOBRQ0VD83 1088 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 HSP90AA4PQ58FG1 418 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 DNAJC25Q9H1X3 360 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 RRAGDQ9NQL2 400 aaPredicted RBP13.15□□□□□ -0.3
NOD1-201ENST00000222823 NSFL1CQ9UNZ2 370 aaKnown RBP13.15□□□□□ -0.3
NOD1-201ENST00000222823 NLRP1Q9C000 1473 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 UBAP1LF5GYI3 381 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
NOD1-201ENST00000222823 TRIM21P19474 475 aaKnown RBP13.15□□□□□ -0.3
NOD1-201ENST00000222823 SPAG1Q07617 926 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 RRAGBQ5VZM2 374 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 TSPOAP1O95153 1857 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 MAGEB6P1A0A0J9YX57 407 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 USP8P40818 1118 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 LMBRD1Q9NUN5 540 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 EXOC1Q9NV70 894 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 IBTKQ9P2D0 1353 aaPredicted RBP13.15□□□□□ -0.3
NOD1-201ENST00000222823 ERICH4A6NGS2 130 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 SGSM2O43147 1006 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 CD2BP2O95400 341 aaKnown RBP13.15□□□□□ -0.3
NOD1-201ENST00000222823 SKILP12757 684 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 HSPA2P54652 639 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 TTLL12Q14166 644 aaPredicted RBP13.15□□□□□ -0.3
NOD1-201ENST00000222823 HEATR3Q7Z4Q2 680 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 MIGA1Q8NAN2 632 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 ALS2CR12Q96Q35 445 aa13.15□□□□□ -0.3
NOD1-201ENST00000222823 MACROD2A1Z1Q3 448 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 TMCO5BA8MYB1 307 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 STAT6P42226 847 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 EIF4A1P60842 406 aaKnown RBP13.14□□□□□ -0.31
NOD1-201ENST00000222823 RUFY3Q7L099 469 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 SYCP3Q8IZU3 236 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 ZC3H12CQ9C0D7 883 aaKnown RBP13.14□□□□□ -0.31
NOD1-201ENST00000222823 GSTTP1A0A1W2PQM5 241 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 PTPDC1A2A3K4 754 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 WDHD1O75717 1129 aaPredicted RBP13.14□□□□□ -0.31
NOD1-201ENST00000222823 LIG1P18858 919 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 NOP2P46087 812 aaKnown RBP13.14□□□□□ -0.31
NOD1-201ENST00000222823 TRAF1Q13077 416 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 ZNF830Q96NB3 372 aaPredicted RBP13.14□□□□□ -0.31
NOD1-201ENST00000222823 CGNQ9P2M7 1197 aaKnown RBP13.14□□□□□ -0.31
NOD1-201ENST00000222823 SYT1P21579 422 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 CBX1P83916 185 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 FAM89AQ96GI7 184 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 NYXQ9GZU5 481 aa13.14□□□□□ -0.31
NOD1-201ENST00000222823 NEBLO76041 1014 aa13.13□□□□□ -0.31
NOD1-201ENST00000222823 EZRP15311 586 aaKnown RBP13.13□□□□□ -0.31
NOD1-201ENST00000222823 GBP2P32456 591 aaPredicted RBP13.13□□□□□ -0.31
NOD1-201ENST00000222823 MAGEB6Q8N7X4 407 aa13.13□□□□□ -0.31
NOD1-201ENST00000222823 ERMNQ8TAM6 284 aa13.13□□□□□ -0.31
NOD1-201ENST00000222823 C8orf37Q96NL8 207 aa13.13□□□□□ -0.31
NOD1-201ENST00000222823 LGR6Q9HBX8 967 aa13.13□□□□□ -0.31
NOD1-201ENST00000222823 MCM9Q9NXL9 1143 aa13.13□□□□□ -0.31
NOD1-201ENST00000222823 EYA2O00167 538 aa13.13□□□□□ -0.31
NOD1-201ENST00000222823 TBCAO75347 108 aaKnown RBP13.13□□□□□ -0.31
NOD1-201ENST00000222823 CALML3P27482 149 aa13.13□□□□□ -0.31
NOD1-201ENST00000222823 LMOD1P29536 600 aaPredicted RBP13.13□□□□□ -0.31
NOD1-201ENST00000222823 SPECC1Q5M775 1068 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms