RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 EXOSC10Q01780 885 aaKnown RBP26.12■■□□□ 1.77
CCDC9-201ENST00000221922 SCARF1Q14162 830 aa26.12■■□□□ 1.77
CCDC9-201ENST00000221922 VPS72Q15906 364 aa26.12■■□□□ 1.77
CCDC9-201ENST00000221922 OSBP2Q969R2 916 aa26.11■■□□□ 1.77
CCDC9-201ENST00000221922 ZNF830Q96NB3 372 aaPredicted RBP26.11■■□□□ 1.77
CCDC9-201ENST00000221922 MROH5Q6ZUA9 1318 aa26.11■■□□□ 1.77
CCDC9-201ENST00000221922 AP5Z1O43299 807 aa26.11■■□□□ 1.77
CCDC9-201ENST00000221922 FAM173BQ6P4H8 233 aa26.11■■□□□ 1.77
CCDC9-201ENST00000221922 NUP62CLQ9H1M0 184 aa26.11■■□□□ 1.77
CCDC9-201ENST00000221922 KIF3AQ9Y496 699 aa26.11■■□□□ 1.77
CCDC9-201ENST00000221922 LIG1P18858 919 aa26.1■■□□□ 1.77
CCDC9-201ENST00000221922 ZAP70P43403 619 aa26.1■■□□□ 1.77
CCDC9-201ENST00000221922 NOLC1Q14978 699 aaKnown RBP eCLIP26.1■■□□□ 1.77
CCDC9-201ENST00000221922 MAP3K11Q16584 847 aa26.1■■□□□ 1.77
CCDC9-201ENST00000221922 SMARCC2Q8TAQ2 1214 aa26.1■■□□□ 1.77
CCDC9-201ENST00000221922 APPBP2Q92624 585 aa26.1■■□□□ 1.77
CCDC9-201ENST00000221922 TTC12Q9H892 705 aaPredicted RBP26.1■■□□□ 1.77
CCDC9-201ENST00000221922 SPTLC3Q9NUV7 552 aa26.1■■□□□ 1.77
CCDC9-201ENST00000221922 JAK2O60674 1132 aa26.1■■□□□ 1.77
CCDC9-201ENST00000221922 SCRN1Q12765 414 aa26.1■■□□□ 1.77
CCDC9-201ENST00000221922 WASHC4Q2M389 1173 aa26.1■■□□□ 1.77
CCDC9-201ENST00000221922 MPNDQ8N594 471 aa26.1■■□□□ 1.77
CCDC9-201ENST00000221922 RTL9Q8NET4 1388 aa26.1■■□□□ 1.77
CCDC9-201ENST00000221922 KCNQ2O43526 872 aa26.09■■□□□ 1.77
CCDC9-201ENST00000221922 HMGN5P82970 282 aaKnown RBP26.09■■□□□ 1.77
CCDC9-201ENST00000221922 FAM98CQ17RN3 349 aaKnown RBP26.09■■□□□ 1.77
CCDC9-201ENST00000221922 LRRC2Q9BYS8 371 aa26.09■■□□□ 1.77
CCDC9-201ENST00000221922 FAM200AQ8TCP9 573 aa26.08■■□□□ 1.77
CCDC9-201ENST00000221922 LEO1Q8WVC0 666 aaPredicted RBP26.08■■□□□ 1.77
CCDC9-201ENST00000221922 MAP7D2Q96T17 732 aa26.08■■□□□ 1.77
CCDC9-201ENST00000221922 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.08■■□□□ 1.775e-7■□□□□ 9.2
CCDC9-201ENST00000221922 ZSCAN16Q9H4T2 348 aaPredicted RBP26.08■■□□□ 1.77
CCDC9-201ENST00000221922 H3BQV1 296 aa26.08■■□□□ 1.77
CCDC9-201ENST00000221922 TPM3P06753 285 aa26.08■■□□□ 1.77
CCDC9-201ENST00000221922 MCAMP43121 646 aa26.08■■□□□ 1.77
CCDC9-201ENST00000221922 IFFO2Q5TF58 517 aa26.08■■□□□ 1.77
CCDC9-201ENST00000221922 ZSCAN25Q6NSZ9 544 aa26.08■■□□□ 1.77
CCDC9-201ENST00000221922 FBXL16Q8N461 479 aa26.08■■□□□ 1.77
CCDC9-201ENST00000221922 SPATA32Q96LK8 384 aa26.08■■□□□ 1.77
CCDC9-201ENST00000221922 NTSR2O95665 410 aa26.07■■□□□ 1.76
CCDC9-201ENST00000221922 PUM3Q15397 648 aaKnown RBP26.07■■□□□ 1.76
CCDC9-201ENST00000221922 RBM43Q6ZSC3 357 aaKnown RBP26.07■■□□□ 1.76
CCDC9-201ENST00000221922 UBAP1LF5GYI3 381 aa26.07■■□□□ 1.76
CCDC9-201ENST00000221922 IMMTQ16891 758 aaKnown RBP26.07■■□□□ 1.76
CCDC9-201ENST00000221922 ZNF274Q96GC6 653 aaPredicted RBP26.07■■□□□ 1.76
CCDC9-201ENST00000221922 ZNF652Q9Y2D9 606 aa26.07■■□□□ 1.76
CCDC9-201ENST00000221922 MRVI1Q9Y6F6 885 aa26.07■■□□□ 1.76
CCDC9-201ENST00000221922 FGFR2P21802 821 aa26.06■■□□□ 1.76
CCDC9-201ENST00000221922 RBM10P98175 930 aaKnown RBP26.06■■□□□ 1.76
CCDC9-201ENST00000221922 TYRO3Q06418 890 aa26.06■■□□□ 1.76
CCDC9-201ENST00000221922 TTF1Q15361 905 aaPredicted RBP26.06■■□□□ 1.76
CCDC9-201ENST00000221922 LPIN2Q92539 896 aa26.06■■□□□ 1.76
CCDC9-201ENST00000221922 NGLY1Q96IV0 654 aa26.06■■□□□ 1.76
CCDC9-201ENST00000221922 DDX19AQ9NUU7 478 aaKnown RBP26.06■■□□□ 1.76
CCDC9-201ENST00000221922 ARID4AP29374 1257 aaPredicted RBP26.05■■□□□ 1.76
CCDC9-201ENST00000221922 APOBRQ0VD83 1088 aa26.05■■□□□ 1.76
CCDC9-201ENST00000221922 C8orf37Q96NL8 207 aa26.05■■□□□ 1.76
CCDC9-201ENST00000221922 TFIP11Q9UBB9 837 aaKnown RBP26.05■■□□□ 1.76
CCDC9-201ENST00000221922 NIP7Q9Y221 180 aaKnown RBP eCLIP26.05■■□□□ 1.76
CCDC9-201ENST00000221922 MYH15Q9Y2K3 1946 aa26.05■■□□□ 1.76
CCDC9-201ENST00000221922 ATRNO75882 1429 aa26.05■■□□□ 1.76
CCDC9-201ENST00000221922 UQCRFS1P1P0C7P4 283 aa26.05■■□□□ 1.76
CCDC9-201ENST00000221922 RESTQ13127 1097 aa26.05■■□□□ 1.76
CCDC9-201ENST00000221922 PI16Q6UXB8 463 aa26.05■■□□□ 1.76
CCDC9-201ENST00000221922 NSUN7Q8NE18 718 aaKnown RBP26.05■■□□□ 1.76
CCDC9-201ENST00000221922 PRIMPOLQ96LW4 560 aa26.05■■□□□ 1.76
CCDC9-201ENST00000221922 DACT1Q9NYF0 836 aa26.05■■□□□ 1.76
CCDC9-201ENST00000221922 GOLGA6L4A6NEF3 574 aa26.04■■□□□ 1.76
CCDC9-201ENST00000221922 CCDC152Q4G0S7 254 aa26.04■■□□□ 1.76
CCDC9-201ENST00000221922 NAA16Q6N069 864 aaPredicted RBP26.04■■□□□ 1.76
CCDC9-201ENST00000221922 CLEC4GQ6UXB4 293 aa26.04■■□□□ 1.76
CCDC9-201ENST00000221922 FNBP4Q8N3X1 1017 aaPredicted RBP26.04■■□□□ 1.76
CCDC9-201ENST00000221922 MYRIPQ8NFW9 859 aa26.04■■□□□ 1.76
CCDC9-201ENST00000221922 TNMDQ9H2S6 317 aa26.04■■□□□ 1.76
CCDC9-201ENST00000221922 CCDC102BQ68D86 513 aa26.03■■□□□ 1.76
CCDC9-201ENST00000221922 DDX11Q96FC9 970 aa26.03■■□□□ 1.76
CCDC9-201ENST00000221922 CLSTN2Q9H4D0 955 aa26.03■■□□□ 1.76
CCDC9-201ENST00000221922 FAM13BQ9NYF5 915 aa26.03■■□□□ 1.76
CCDC9-201ENST00000221922 RGL2O15211 777 aa26.03■■□□□ 1.76
CCDC9-201ENST00000221922 PLCB2Q00722 1185 aa26.03■■□□□ 1.76
CCDC9-201ENST00000221922 CAMK4Q16566 473 aa26.03■■□□□ 1.76
CCDC9-201ENST00000221922 CERKQ8TCT0 537 aa26.03■■□□□ 1.76
CCDC9-201ENST00000221922 FOXP2O15409 715 aa26.02■■□□□ 1.76
CCDC9-201ENST00000221922 TTLL5Q6EMB2 1281 aa26.02■■□□□ 1.76
CCDC9-201ENST00000221922 THSD7AQ9UPZ6 1657 aa26.02■■□□□ 1.76
CCDC9-201ENST00000221922 A0A0G2JLW4 131 aa26.02■■□□□ 1.76
CCDC9-201ENST00000221922 PTPDC1A2A3K4 754 aa26.02■■□□□ 1.76
CCDC9-201ENST00000221922 EVCP57679 992 aa26.02■■□□□ 1.76
CCDC9-201ENST00000221922 DNTTIP2Q5QJE6 756 aaKnown RBP26.02■■□□□ 1.76
CCDC9-201ENST00000221922 LINC00116Q8NCU8 138 aa26.02■■□□□ 1.76
CCDC9-201ENST00000221922 CFAP45Q9UL16 551 aa26.02■■□□□ 1.76
CCDC9-201ENST00000221922 CNTNAP4Q9C0A0 1308 aa26.02■■□□□ 1.76
CCDC9-201ENST00000221922 SCN7AQ01118 1682 aa26.01■■□□□ 1.76
CCDC9-201ENST00000221922 FAM177BA6PVY3 158 aa26.01■■□□□ 1.75
CCDC9-201ENST00000221922 SLC5A1P13866 664 aa26.01■■□□□ 1.75
CCDC9-201ENST00000221922 ADD2P35612 726 aa26.01■■□□□ 1.75
CCDC9-201ENST00000221922 PHKA1P46020 1223 aa26.01■■□□□ 1.75
CCDC9-201ENST00000221922 MTERF4Q7Z6M4 381 aaKnown RBP26.01■■□□□ 1.75
CCDC9-201ENST00000221922 KIAA1524Q8TCG1 905 aa26.01■■□□□ 1.75
CCDC9-201ENST00000221922 PGBD1Q96JS3 809 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms