RNA–Protein interactions for RNA: ENST00000219439.8

HSDL1-201, Transcript of hydroxysteroid dehydrogenase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSDL1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSDL1-201ENST00000219439 C8orf76Q96K31 380 aa17.46■□□□□ 0.38
HSDL1-201ENST00000219439 TOM1L2Q6ZVM7 507 aa17.45■□□□□ 0.38
HSDL1-201ENST00000219439 CCDC191Q8NCU4 936 aa17.45■□□□□ 0.38
HSDL1-201ENST00000219439 SALL1Q9NSC2 1324 aa17.45■□□□□ 0.38
HSDL1-201ENST00000219439 LAMA4Q16363 1823 aa17.45■□□□□ 0.38
HSDL1-201ENST00000219439 KLF18A0A0U1RQI7 1052 aa17.45■□□□□ 0.38
HSDL1-201ENST00000219439 GOLGA8BA8MQT2 603 aa17.45■□□□□ 0.38
HSDL1-201ENST00000219439 CPLX1O14810 134 aa17.45■□□□□ 0.38
HSDL1-201ENST00000219439 FDPSP14324 419 aaKnown RBP17.45■□□□□ 0.38
HSDL1-201ENST00000219439 CDC25BP30305 580 aa17.45■□□□□ 0.38
HSDL1-201ENST00000219439 EVA1CP58658 441 aa17.45■□□□□ 0.38
HSDL1-201ENST00000219439 ENGASEQ8NFI3 743 aa17.45■□□□□ 0.38
HSDL1-201ENST00000219439 ATL3Q6DD88 541 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 SARM1Q6SZW1 724 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 CCDC112Q8NEF3 446 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 SMTNL1A8MU46 457 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 SKILP12757 684 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 DHX40Q8IX18 779 aaKnown RBP17.44■□□□□ 0.38
HSDL1-201ENST00000219439 MRFAP1L1Q96HT8 127 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 GJB4Q9NTQ9 266 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 CTNNA3Q9UI47 895 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 PRC1O43663 620 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 ATP2B3Q16720 1220 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 SMAP1Q8IYB5 467 aaPredicted RBP17.44■□□□□ 0.38
HSDL1-201ENST00000219439 XAGE2Q96GT9 111 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 ORC3Q9UBD5 711 aaPredicted RBP17.44■□□□□ 0.38
HSDL1-201ENST00000219439 CLIC4Q9Y696 253 aa17.44■□□□□ 0.38
HSDL1-201ENST00000219439 CCDC69A6NI79 296 aa17.43■□□□□ 0.38
HSDL1-201ENST00000219439 LRRFIP1Q32MZ4 808 aaKnown RBP17.43■□□□□ 0.38
HSDL1-201ENST00000219439 RALYLQ86SE5 291 aaKnown RBP17.43■□□□□ 0.38
HSDL1-201ENST00000219439 CHMP4CQ96CF2 233 aa17.43■□□□□ 0.38
HSDL1-201ENST00000219439 NAT10Q9H0A0 1025 aaKnown RBP17.43■□□□□ 0.38
HSDL1-201ENST00000219439 TRMT1Q9NXH9 659 aaKnown RBP17.43■□□□□ 0.38
HSDL1-201ENST00000219439 U2AF2P26368 475 aaKnown RBP eCLIP17.43■□□□□ 0.381e-6■■■■□ 20.5
HSDL1-201ENST00000219439 NDUFA8P51970 172 aa17.43■□□□□ 0.38
HSDL1-201ENST00000219439 ZCRB1Q8TBF4 217 aaKnown RBP17.43■□□□□ 0.38
HSDL1-201ENST00000219439 BIN1O00499 593 aa17.43■□□□□ 0.38
HSDL1-201ENST00000219439 CTIFO43310 598 aaKnown RBP17.43■□□□□ 0.38
HSDL1-201ENST00000219439 FGAP02671 866 aa17.43■□□□□ 0.38
HSDL1-201ENST00000219439 CEP135Q66GS9 1140 aa17.43■□□□□ 0.38
HSDL1-201ENST00000219439 PI16Q6UXB8 463 aa17.43■□□□□ 0.38
HSDL1-201ENST00000219439 USP27XA6NNY8 438 aa17.42■□□□□ 0.38
HSDL1-201ENST00000219439 SCARF1Q14162 830 aa17.42■□□□□ 0.38
HSDL1-201ENST00000219439 RTEL1Q9NZ71 1219 aa17.42■□□□□ 0.38
HSDL1-201ENST00000219439 CIAO1O76071 339 aa17.42■□□□□ 0.38
HSDL1-201ENST00000219439 ZAP70P43403 619 aa17.42■□□□□ 0.38
HSDL1-201ENST00000219439 ADALQ6DHV7 355 aa17.42■□□□□ 0.38
HSDL1-201ENST00000219439 SYNE3Q6ZMZ3 975 aa17.42■□□□□ 0.38
HSDL1-201ENST00000219439 FMR1NBQ8N0W7 255 aaPredicted RBP17.42■□□□□ 0.38
HSDL1-201ENST00000219439 NCBP1Q09161 790 aaKnown RBP17.41■□□□□ 0.38
HSDL1-201ENST00000219439 NAA30Q147X3 362 aaPredicted RBP17.41■□□□□ 0.38
HSDL1-201ENST00000219439 ANKRD7Q92527 254 aa17.41■□□□□ 0.38
HSDL1-201ENST00000219439 FAM89AQ96GI7 184 aa17.41■□□□□ 0.38
HSDL1-201ENST00000219439 DHX16O60231 1041 aaKnown RBP17.41■□□□□ 0.38
HSDL1-201ENST00000219439 LINC00301Q8NCQ3 95 aa17.41■□□□□ 0.38
HSDL1-201ENST00000219439 PUS7LQ9H0K6 701 aaKnown RBP17.41■□□□□ 0.38
HSDL1-201ENST00000219439 PAXBP1Q9Y5B6 917 aa17.41■□□□□ 0.38
HSDL1-201ENST00000219439 AKAP2Q9Y2D5 859 aa17.41■□□□□ 0.38
HSDL1-201ENST00000219439 PCDH11XQ9BZA7 1347 aa17.4■□□□□ 0.38
HSDL1-201ENST00000219439 PCDH11YQ9BZA8 1340 aa17.4■□□□□ 0.38
HSDL1-201ENST00000219439 SPTLC2O15270 562 aa17.4■□□□□ 0.38
HSDL1-201ENST00000219439 NEMFO60524 1076 aa17.4■□□□□ 0.38
HSDL1-201ENST00000219439 SMC2O95347 1197 aa17.4■□□□□ 0.38
HSDL1-201ENST00000219439 PTPN14Q15678 1187 aa17.4■□□□□ 0.38
HSDL1-201ENST00000219439 NCOA7Q8NI08 942 aa17.4■□□□□ 0.38
HSDL1-201ENST00000219439 ZNF213O14771 459 aa17.4■□□□□ 0.38
HSDL1-201ENST00000219439 DPCR1Q3MIW9 517 aa17.4■□□□□ 0.38
HSDL1-201ENST00000219439 KCNG4Q8TDN1 519 aa17.39■□□□□ 0.38
HSDL1-201ENST00000219439 FOXP2O15409 715 aa17.39■□□□□ 0.37
HSDL1-201ENST00000219439 ZFYP08048 801 aaPredicted RBP17.39■□□□□ 0.37
HSDL1-201ENST00000219439 ISM2Q6H9L7 571 aa17.39■□□□□ 0.37
HSDL1-201ENST00000219439 FBXO18Q8NFZ0 1043 aa17.39■□□□□ 0.37
HSDL1-201ENST00000219439 MYSM1Q5VVJ2 828 aa17.39■□□□□ 0.37
HSDL1-201ENST00000219439 APPBP2Q92624 585 aa17.39■□□□□ 0.37
HSDL1-201ENST00000219439 ATG3Q9NT62 314 aa17.39■□□□□ 0.37
HSDL1-201ENST00000219439 KIAA1468Q9P260 1216 aa17.39■□□□□ 0.37
HSDL1-201ENST00000219439 GPAA1O43292 621 aa17.38■□□□□ 0.37
HSDL1-201ENST00000219439 APPP05067 770 aa17.38■□□□□ 0.37
HSDL1-201ENST00000219439 IFIT5Q13325 482 aaKnown RBP17.38■□□□□ 0.37
HSDL1-201ENST00000219439 MB21D2Q8IYB1 491 aaPredicted RBP17.38■□□□□ 0.37
HSDL1-201ENST00000219439 A0A1W2PQ27 194 aa17.38■□□□□ 0.37
HSDL1-201ENST00000219439 A0A1W2PQ64 194 aa17.38■□□□□ 0.37
HSDL1-201ENST00000219439 A0A1W2PQD8 194 aa17.38■□□□□ 0.37
HSDL1-201ENST00000219439 SLC3A2P08195 630 aaKnown RBP17.38■□□□□ 0.37
HSDL1-201ENST00000219439 RXRAP19793 462 aa17.38■□□□□ 0.37
HSDL1-201ENST00000219439 MARCKSP29966 332 aaPredicted RBP17.38■□□□□ 0.37
HSDL1-201ENST00000219439 TRDNQ13061 729 aa17.38■□□□□ 0.37
HSDL1-201ENST00000219439 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
HSDL1-201ENST00000219439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.38■□□□□ 0.37
HSDL1-201ENST00000219439 HPS5Q9UPZ3 1129 aa17.38■□□□□ 0.37
HSDL1-201ENST00000219439 MYH15Q9Y2K3 1946 aa17.37■□□□□ 0.37
HSDL1-201ENST00000219439 ANTXR2P58335 489 aa17.37■□□□□ 0.37
HSDL1-201ENST00000219439 METTL24Q5JXM2 366 aa17.37■□□□□ 0.37
HSDL1-201ENST00000219439 CPDO75976 1380 aa17.37■□□□□ 0.37
HSDL1-201ENST00000219439 ERVV-2B6SEH9 535 aa17.37■□□□□ 0.37
HSDL1-201ENST00000219439 KIF28PB7ZC32 967 aa17.37■□□□□ 0.37
HSDL1-201ENST00000219439 CCZ1BP86790 482 aa17.37■□□□□ 0.37
HSDL1-201ENST00000219439 CCZ1P86791 482 aaPredicted RBP17.37■□□□□ 0.37
HSDL1-201ENST00000219439 TCIRG1Q13488 830 aa17.37■□□□□ 0.37
HSDL1-201ENST00000219439 GNL2Q13823 731 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms