RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 RBM17Q96I25 401 aaKnown RBP20.17■□□□□ 0.82
CHGA-201ENST00000216492 MMP10P09238 476 aa20.17■□□□□ 0.82
CHGA-201ENST00000216492 RASGRF1Q13972 1273 aa20.17■□□□□ 0.82
CHGA-201ENST00000216492 CCDC129Q6ZRS4 1044 aa20.17■□□□□ 0.82
CHGA-201ENST00000216492 TTC14Q96N46 770 aa20.17■□□□□ 0.82
CHGA-201ENST00000216492 LIMCH1Q9UPQ0 1083 aa20.17■□□□□ 0.82
CHGA-201ENST00000216492 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.17■□□□□ 0.82
CHGA-201ENST00000216492 RBM8AQ9Y5S9 174 aaKnown RBP20.17■□□□□ 0.82
CHGA-201ENST00000216492 KLRG2A4D1S0 409 aaPredicted RBP20.16■□□□□ 0.82
CHGA-201ENST00000216492 ESPNB1AK53 854 aa20.16■□□□□ 0.82
CHGA-201ENST00000216492 GYG1P46976 350 aa20.16■□□□□ 0.82
CHGA-201ENST00000216492 PRPF40BQ6NWY9 871 aaKnown RBP20.16■□□□□ 0.82
CHGA-201ENST00000216492 RASEFQ8IZ41 740 aa20.16■□□□□ 0.82
CHGA-201ENST00000216492 PPP1R9BQ96SB3 815 aa20.16■□□□□ 0.82
CHGA-201ENST00000216492 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.16■□□□□ 0.82
CHGA-201ENST00000216492 PARP3Q9Y6F1 533 aa20.16■□□□□ 0.82
CHGA-201ENST00000216492 DEFB132Q7Z7B7 95 aa20.15■□□□□ 0.82
CHGA-201ENST00000216492 BRIP1Q9BX63 1249 aa20.15■□□□□ 0.82
CHGA-201ENST00000216492 TAF1P21675 1872 aa20.15■□□□□ 0.82
CHGA-201ENST00000216492 WASHC4Q2M389 1173 aa20.15■□□□□ 0.82
CHGA-201ENST00000216492 MSL1Q68DK7 614 aa20.15■□□□□ 0.82
CHGA-201ENST00000216492 ZSCAN25Q6NSZ9 544 aa20.15■□□□□ 0.82
CHGA-201ENST00000216492 VPS37DQ86XT2 251 aa20.15■□□□□ 0.82
CHGA-201ENST00000216492 SYAP1Q96A49 352 aaPredicted RBP20.15■□□□□ 0.82
CHGA-201ENST00000216492 PIH1D3Q9NQM4 214 aaKnown RBP20.15■□□□□ 0.82
CHGA-201ENST00000216492 GNL3LQ9NVN8 582 aaKnown RBP20.15■□□□□ 0.82
CHGA-201ENST00000216492 HOXA10P31260 410 aaPredicted RBP20.14■□□□□ 0.81
CHGA-201ENST00000216492 AK2P54819 239 aa20.14■□□□□ 0.81
CHGA-201ENST00000216492 OSBP2Q969R2 916 aa20.14■□□□□ 0.81
CHGA-201ENST00000216492 FAM84BQ96KN1 310 aaPredicted RBP20.14■□□□□ 0.81
CHGA-201ENST00000216492 ANKIB1Q9P2G1 1089 aa20.14■□□□□ 0.81
CHGA-201ENST00000216492 IDH1O75874 414 aaKnown RBP20.14■□□□□ 0.81
CHGA-201ENST00000216492 BBOX1O75936 387 aa20.14■□□□□ 0.81
CHGA-201ENST00000216492 ZKSCAN1P17029 563 aaPredicted RBP20.14■□□□□ 0.81
CHGA-201ENST00000216492 CASTP20810 708 aaKnown RBP20.14■□□□□ 0.81
CHGA-201ENST00000216492 SLC9C2Q5TAH2 1124 aa20.14■□□□□ 0.81
CHGA-201ENST00000216492 KCNB2Q92953 911 aa20.14■□□□□ 0.81
CHGA-201ENST00000216492 TM6SF1Q9BZW5 370 aa20.14■□□□□ 0.81
CHGA-201ENST00000216492 ZNF804BA4D1E1 1349 aa20.13■□□□□ 0.81
CHGA-201ENST00000216492 CREB3L3Q68CJ9 461 aa20.13■□□□□ 0.81
CHGA-201ENST00000216492 TNRC6CQ9HCJ0 1690 aaKnown RBP20.13■□□□□ 0.81
CHGA-201ENST00000216492 LRSAM1Q6UWE0 723 aa20.12■□□□□ 0.81
CHGA-201ENST00000216492 APPBP2Q92624 585 aa20.12■□□□□ 0.81
CHGA-201ENST00000216492 CRAMP1Q96RY5 1269 aa20.12■□□□□ 0.81
CHGA-201ENST00000216492 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
CHGA-201ENST00000216492 IQSEC3Q9UPP2 1182 aaPredicted RBP20.12■□□□□ 0.81
CHGA-201ENST00000216492 SPEF2Q9C093 1822 aa20.12■□□□□ 0.81
CHGA-201ENST00000216492 ADD2P35612 726 aa20.12■□□□□ 0.81
CHGA-201ENST00000216492 VPS53Q5VIR6 699 aa20.12■□□□□ 0.81
CHGA-201ENST00000216492 RNF20Q5VTR2 975 aa20.12■□□□□ 0.81
CHGA-201ENST00000216492 FBXO33Q7Z6M2 555 aa20.12■□□□□ 0.81
CHGA-201ENST00000216492 TMEM63CQ9P1W3 806 aa20.12■□□□□ 0.81
CHGA-201ENST00000216492 MAST3O60307 1309 aa20.12■□□□□ 0.81
CHGA-201ENST00000216492 RGPD3A6NKT7 1758 aaPredicted RBP20.11■□□□□ 0.81
CHGA-201ENST00000216492 RGPD4Q7Z3J3 1758 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 RUFY3Q7L099 469 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 CHAMP1Q96JM3 812 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 ZSCAN31Q96LW9 406 aaPredicted RBP20.11■□□□□ 0.81
CHGA-201ENST00000216492 LEMD3Q9Y2U8 911 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 CYP46A1Q9Y6A2 500 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 M0R2C6 588 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 SLC27A2O14975 620 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 KLRK1P26718 216 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 MAP3K12Q12852 859 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 UBE3CQ15386 1083 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 JAKMIP1Q96N16 626 aaKnown RBP20.11■□□□□ 0.81
CHGA-201ENST00000216492 PUS7LQ9H0K6 701 aaKnown RBP20.11■□□□□ 0.81
CHGA-201ENST00000216492 SH2B1Q9NRF2 756 aaPredicted RBP20.11■□□□□ 0.81
CHGA-201ENST00000216492 PDRG1Q9NUG6 133 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 SMC3Q9UQE7 1217 aa20.11■□□□□ 0.81
CHGA-201ENST00000216492 RPAP1Q9BWH6 1393 aaPredicted RBP20.1■□□□□ 0.81
CHGA-201ENST00000216492 HIBADHP31937 336 aaKnown RBP20.1■□□□□ 0.81
CHGA-201ENST00000216492 PDE6BP35913 854 aa20.1■□□□□ 0.81
CHGA-201ENST00000216492 ATP6V1DQ9Y5K8 247 aa20.1■□□□□ 0.81
CHGA-201ENST00000216492 U3KPZ7 1027 aaPredicted RBP20.1■□□□□ 0.81
CHGA-201ENST00000216492 SRGNP10124 158 aa20.09■□□□□ 0.81
CHGA-201ENST00000216492 HSPD1P10809 573 aaKnown RBP20.09■□□□□ 0.81
CHGA-201ENST00000216492 DSCC1Q9BVC3 393 aa20.09■□□□□ 0.81
CHGA-201ENST00000216492 RBSNQ9H1K0 784 aa20.09■□□□□ 0.81
CHGA-201ENST00000216492 ZSWIM6Q9HCJ5 1215 aa20.09■□□□□ 0.81
CHGA-201ENST00000216492 NSFL1CQ9UNZ2 370 aaKnown RBP20.09■□□□□ 0.81
CHGA-201ENST00000216492 XDHP47989 1333 aa20.09■□□□□ 0.81
CHGA-201ENST00000216492 SYCE3A1L190 88 aa20.09■□□□□ 0.81
CHGA-201ENST00000216492 ADCK5Q3MIX3 580 aa20.09■□□□□ 0.81
CHGA-201ENST00000216492 SLC51AQ86UW1 340 aa20.09■□□□□ 0.81
CHGA-201ENST00000216492 DENND2AQ9ULE3 1009 aa20.09■□□□□ 0.81
CHGA-201ENST00000216492 AKAP11Q9UKA4 1901 aa20.08■□□□□ 0.81
CHGA-201ENST00000216492 PDE6AP16499 860 aa20.08■□□□□ 0.81
CHGA-201ENST00000216492 TXNRD3Q86VQ6 643 aa20.08■□□□□ 0.81
CHGA-201ENST00000216492 LRP2BPQ9P2M1 347 aa20.08■□□□□ 0.81
CHGA-201ENST00000216492 WWC3Q9ULE0 1092 aa20.08■□□□□ 0.81
CHGA-201ENST00000216492 ZNF532Q9HCE3 1301 aa20.08■□□□□ 0.8
CHGA-201ENST00000216492 CASZ1Q86V15 1759 aa20.08■□□□□ 0.8
CHGA-201ENST00000216492 STX6O43752 255 aa20.07■□□□□ 0.8
CHGA-201ENST00000216492 ZSCAN22P10073 491 aaPredicted RBP20.07■□□□□ 0.8
CHGA-201ENST00000216492 PSMA5P28066 241 aa20.07■□□□□ 0.8
CHGA-201ENST00000216492 GPSM2P81274 684 aa20.07■□□□□ 0.8
CHGA-201ENST00000216492 TSGA10IPQ3SY00 556 aa20.07■□□□□ 0.8
CHGA-201ENST00000216492 TMEM87AQ8NBN3 555 aa20.07■□□□□ 0.8
CHGA-201ENST00000216492 SEMA3EO15041 775 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms