RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 KIF13AQ9H1H9 1805 aa12.9□□□□□ -0.34
ACTN1-201ENST00000193403 ADKP55263 362 aaKnown RBP12.9□□□□□ -0.34
ACTN1-201ENST00000193403 CABP4P57796 275 aa12.9□□□□□ -0.34
ACTN1-201ENST00000193403 KIF4BQ2VIQ3 1234 aa12.9□□□□□ -0.34
ACTN1-201ENST00000193403 ZNF594Q96JF6 807 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-201ENST00000193403 IDH1O75874 414 aaKnown RBP12.9□□□□□ -0.34
ACTN1-201ENST00000193403 PNMA6AP0CW24 399 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-201ENST00000193403 ETF1P62495 437 aaKnown RBP12.9□□□□□ -0.34
ACTN1-201ENST00000193403 RBM6P78332 1123 aaKnown RBP12.9□□□□□ -0.34
ACTN1-201ENST00000193403 PNOCQ13519 176 aa12.9□□□□□ -0.34
ACTN1-201ENST00000193403 JMYQ8N9B5 988 aa12.9□□□□□ -0.34
ACTN1-201ENST00000193403 KCNG4Q8TDN1 519 aa12.9□□□□□ -0.34
ACTN1-201ENST00000193403 RNMTO43148 476 aaKnown RBP12.9□□□□□ -0.35
ACTN1-201ENST00000193403 PRC1O43663 620 aa12.9□□□□□ -0.35
ACTN1-201ENST00000193403 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.35
ACTN1-201ENST00000193403 GTF2E1P29083 439 aaPredicted RBP12.9□□□□□ -0.35
ACTN1-201ENST00000193403 ZNF827Q17R98 1081 aa12.9□□□□□ -0.35
ACTN1-201ENST00000193403 E4F1Q66K89 784 aaPredicted RBP12.9□□□□□ -0.35
ACTN1-201ENST00000193403 CERS3Q8IU89 383 aa12.9□□□□□ -0.35
ACTN1-201ENST00000193403 CDC25BP30305 580 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 STX17P56962 302 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-201ENST00000193403 MTX1Q13505 466 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 SYCP1Q15431 976 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 AKAP4Q5JQC9 854 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 RCOR1Q9UKL0 485 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 E7EWF7 191 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 RHOXF2BP0C7M4 288 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 NAA16Q6N069 864 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-201ENST00000193403 ARMCX5Q6P1M9 558 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 RHOXF2Q9BQY4 288 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 ALG1Q9BT22 464 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 CWC15Q9P013 229 aaKnown RBP12.89□□□□□ -0.35
ACTN1-201ENST00000193403 PFKFB1P16118 471 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 GPTP24298 496 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 STOX1Q6ZVD7 989 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 PPFIBP1Q86W92 1011 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 VPS18Q9P253 973 aa12.89□□□□□ -0.35
ACTN1-201ENST00000193403 ADCY9O60503 1353 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 PFKFB2O60825 505 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 PPP2R3AQ06190 1150 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 NUP133Q8WUM0 1156 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 AIFM3Q96NN9 605 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 CLIC6Q96NY7 704 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 CEP126Q9P2H0 1117 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 KIF20BQ96Q89 1820 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 SAFBQ15424 915 aaKnown RBP eCLIP12.88□□□□□ -0.35
ACTN1-201ENST00000193403 PHKBQ93100 1093 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
ACTN1-201ENST00000193403 MYL5Q02045 173 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 GCKRQ14397 625 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 CCDC158Q5M9N0 1113 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 JAKMIP3Q5VZ66 844 aa12.88□□□□□ -0.35
ACTN1-201ENST00000193403 DDX21Q9NR30 783 aaKnown RBP eCLIP12.88□□□□□ -0.35
ACTN1-201ENST00000193403 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
ACTN1-201ENST00000193403 SARM1Q6SZW1 724 aa12.87□□□□□ -0.35
ACTN1-201ENST00000193403 ANKRD24Q8TF21 1146 aa12.87□□□□□ -0.35
ACTN1-201ENST00000193403 ZNF213O14771 459 aa12.87□□□□□ -0.35
ACTN1-201ENST00000193403 TPM1P09493 284 aa12.87□□□□□ -0.35
ACTN1-201ENST00000193403 PDIA3P30101 505 aaKnown RBP12.87□□□□□ -0.35
ACTN1-201ENST00000193403 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
ACTN1-201ENST00000193403 ANO1Q5XXA6 986 aa12.87□□□□□ -0.35
ACTN1-201ENST00000193403 NYAP1Q6ZVC0 841 aa12.87□□□□□ -0.35
ACTN1-201ENST00000193403 FANCLQ9NW38 375 aa12.87□□□□□ -0.35
ACTN1-201ENST00000193403 TMEM232C9JQI7 657 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 NLRP12P59046 1061 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 AKAP17AQ02040 695 aaKnown RBP12.86□□□□□ -0.35
ACTN1-201ENST00000193403 LONRF3Q496Y0 759 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 MYSM1Q5VVJ2 828 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 ADALQ6DHV7 355 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 KBTBD3Q8NAB2 608 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 BAG1Q99933 345 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-201ENST00000193403 NEURL1BA8MQ27 555 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 SLC4A8Q2Y0W8 1093 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 CCDC102BQ68D86 513 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 TOM1L2Q6ZVM7 507 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 CNNM1Q9NRU3 951 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 CAPN2P17655 700 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 ATP5JP18859 108 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 DPF2Q92785 391 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 SLC26A6Q9BXS9 759 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 IMPACTQ9P2X3 320 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 KDRP35968 1356 aa12.86□□□□□ -0.35
ACTN1-201ENST00000193403 AFMP43652 599 aa12.85□□□□□ -0.35
ACTN1-201ENST00000193403 METAP2P50579 478 aaKnown RBP eCLIP12.85□□□□□ -0.352e-6■■■□□ 17.8
ACTN1-201ENST00000193403 TXLNBQ8N3L3 684 aa12.85□□□□□ -0.35
ACTN1-201ENST00000193403 LLPHQ9BRT6 129 aaKnown RBP12.85□□□□□ -0.35
ACTN1-201ENST00000193403 DLG5Q8TDM6 1919 aa12.85□□□□□ -0.35
ACTN1-201ENST00000193403 ANKRD65E5RJM6 399 aa12.85□□□□□ -0.35
ACTN1-201ENST00000193403 LRRFIP1Q32MZ4 808 aaKnown RBP12.85□□□□□ -0.35
ACTN1-201ENST00000193403 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
ACTN1-201ENST00000193403 IGKV5-2P06315 115 aa12.85□□□□□ -0.35
ACTN1-201ENST00000193403 HSPD1P10809 573 aaKnown RBP12.85□□□□□ -0.35
ACTN1-201ENST00000193403 ST5P78524 1137 aa12.85□□□□□ -0.35
ACTN1-201ENST00000193403 PRDM11Q9NQV5 511 aa12.85□□□□□ -0.35
ACTN1-201ENST00000193403 CEP170BQ9Y4F5 1589 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-201ENST00000193403 CARMIL3Q8ND23 1372 aa12.85□□□□□ -0.35
ACTN1-201ENST00000193403 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms