RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 TM6SF1Q9BZW5 370 aa23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 TAF6LQ9Y6J9 622 aa23.55■■□□□ 1.36
TNFRSF1A-201ENST00000162749 RPAP1Q9BWH6 1393 aaPredicted RBP23.54■■□□□ 1.36
TNFRSF1A-201ENST00000162749 HSP90AA1P07900 732 aaKnown RBP23.54■■□□□ 1.36
TNFRSF1A-201ENST00000162749 MCM2P49736 904 aa23.54■■□□□ 1.36
TNFRSF1A-201ENST00000162749 FBXO33Q7Z6M2 555 aa23.54■■□□□ 1.36
TNFRSF1A-201ENST00000162749 JAKMIP1Q96N16 626 aaKnown RBP23.54■■□□□ 1.36
TNFRSF1A-201ENST00000162749 ANKIB1Q9P2G1 1089 aa23.54■■□□□ 1.36
TNFRSF1A-201ENST00000162749 PDE6AP16499 860 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 TTC14Q96N46 770 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 STK32BQ9NY57 414 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 PARP3Q9Y6F1 533 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 IRS2Q9Y4H2 1338 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 TCRBV5S4A2TA0A5A2 114 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 DDIT3P35638 169 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 BAG6P46379 1132 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 SF3B2Q13435 895 aaKnown RBP23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 TSGA10IPQ3SY00 556 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 DEFB132Q7Z7B7 95 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 XDHP47989 1333 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 ZNF532Q9HCE3 1301 aa23.53■■□□□ 1.36
TNFRSF1A-201ENST00000162749 CACNA1SQ13698 1873 aa23.52■■□□□ 1.36
TNFRSF1A-201ENST00000162749 MAP3K12Q12852 859 aa23.52■■□□□ 1.36
TNFRSF1A-201ENST00000162749 CRAMP1Q96RY5 1269 aa23.52■■□□□ 1.36
TNFRSF1A-201ENST00000162749 ZSWIM6Q9HCJ5 1215 aa23.52■■□□□ 1.36
TNFRSF1A-201ENST00000162749 CHMP5Q9NZZ3 219 aa23.52■■□□□ 1.36
TNFRSF1A-201ENST00000162749 FOXP2O15409 715 aa23.52■■□□□ 1.36
TNFRSF1A-201ENST00000162749 GPAA1O43292 621 aa23.52■■□□□ 1.36
TNFRSF1A-201ENST00000162749 CYP21A2P08686 494 aa23.52■■□□□ 1.36
TNFRSF1A-201ENST00000162749 CPA1P15085 419 aa23.52■■□□□ 1.36
TNFRSF1A-201ENST00000162749 TXNRD3Q86VQ6 643 aa23.52■■□□□ 1.36
TNFRSF1A-201ENST00000162749 FOXD4L1Q9NU39 408 aa23.51■■□□□ 1.35
TNFRSF1A-201ENST00000162749 LEMD3Q9Y2U8 911 aa23.51■■□□□ 1.35
TNFRSF1A-201ENST00000162749 LTBP1Q14766 1721 aa23.51■■□□□ 1.35
TNFRSF1A-201ENST00000162749 BBOX1O75936 387 aa23.51■■□□□ 1.35
TNFRSF1A-201ENST00000162749 TMX3Q96JJ7 454 aa23.51■■□□□ 1.35
TNFRSF1A-201ENST00000162749 HIBADHP31937 336 aaKnown RBP23.5■■□□□ 1.35
TNFRSF1A-201ENST00000162749 COL9A3Q14050 684 aaPredicted RBP23.5■■□□□ 1.35
TNFRSF1A-201ENST00000162749 MAGEB6Q8N7X4 407 aa23.5■■□□□ 1.35
TNFRSF1A-201ENST00000162749 DENND2AQ9ULE3 1009 aa23.5■■□□□ 1.35
TNFRSF1A-201ENST00000162749 SRGNP10124 158 aa23.49■■□□□ 1.35
TNFRSF1A-201ENST00000162749 RUFY3Q7L099 469 aa23.49■■□□□ 1.35
TNFRSF1A-201ENST00000162749 CYP46A1Q9Y6A2 500 aa23.49■■□□□ 1.35
TNFRSF1A-201ENST00000162749 CCDC88AQ3V6T2 1871 aa23.49■■□□□ 1.35
TNFRSF1A-201ENST00000162749 SEMA3EO15041 775 aa23.49■■□□□ 1.35
TNFRSF1A-201ENST00000162749 NOL8Q76FK4 1167 aaKnown RBP23.49■■□□□ 1.35
TNFRSF1A-201ENST00000162749 PSMA5P28066 241 aa23.48■■□□□ 1.35
TNFRSF1A-201ENST00000162749 GPSM2P81274 684 aa23.48■■□□□ 1.35
TNFRSF1A-201ENST00000162749 LRP2BPQ9P2M1 347 aa23.48■■□□□ 1.35
TNFRSF1A-201ENST00000162749 AK2P54819 239 aa23.48■■□□□ 1.35
TNFRSF1A-201ENST00000162749 NSFL1CQ9UNZ2 370 aaKnown RBP23.48■■□□□ 1.35
TNFRSF1A-201ENST00000162749 ABCF2Q9UG63 623 aa23.47■■□□□ 1.35
TNFRSF1A-201ENST00000162749 PDS5AQ29RF7 1337 aaKnown RBP23.47■■□□□ 1.35
TNFRSF1A-201ENST00000162749 PDE6BP35913 854 aa23.47■■□□□ 1.35
TNFRSF1A-201ENST00000162749 KRT32Q14532 448 aa23.47■■□□□ 1.35
TNFRSF1A-201ENST00000162749 A0A0G2JLW4 131 aa23.46■■□□□ 1.35
TNFRSF1A-201ENST00000162749 NPR1P16066 1061 aa23.45■■□□□ 1.35
TNFRSF1A-201ENST00000162749 PDRG1Q9NUG6 133 aa23.45■■□□□ 1.35
TNFRSF1A-201ENST00000162749 ZBTB22O15209 634 aa23.45■■□□□ 1.34
TNFRSF1A-201ENST00000162749 FGAP02671 866 aa23.45■■□□□ 1.34
TNFRSF1A-201ENST00000162749 TTLL5Q6EMB2 1281 aa23.45■■□□□ 1.34
TNFRSF1A-201ENST00000162749 BLOC1S2Q6QNY1 142 aa23.45■■□□□ 1.34
TNFRSF1A-201ENST00000162749 TMC4Q7Z404 712 aa23.45■■□□□ 1.34
TNFRSF1A-201ENST00000162749 AIDAQ96BJ3 306 aa23.45■■□□□ 1.34
TNFRSF1A-201ENST00000162749 PODXL2Q9NZ53 605 aa23.45■■□□□ 1.34
TNFRSF1A-201ENST00000162749 PPEF1O14829 653 aaPredicted RBP23.44■■□□□ 1.34
TNFRSF1A-201ENST00000162749 C15orf52Q6ZUT6 534 aaKnown RBP23.44■■□□□ 1.34
TNFRSF1A-201ENST00000162749 GPR101Q96P66 508 aaPredicted RBP23.44■■□□□ 1.34
TNFRSF1A-201ENST00000162749 PDGFDQ9GZP0 370 aaPredicted RBP23.44■■□□□ 1.34
TNFRSF1A-201ENST00000162749 UFL1O94874 794 aa23.44■■□□□ 1.34
TNFRSF1A-201ENST00000162749 CUL4AQ13619 759 aa23.44■■□□□ 1.34
TNFRSF1A-201ENST00000162749 STOX1Q6ZVD7 989 aa23.44■■□□□ 1.34
TNFRSF1A-201ENST00000162749 CHD4Q14839 1912 aa23.44■■□□□ 1.34
TNFRSF1A-201ENST00000162749 RPS6KB1P23443 525 aa23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 MCM4P33991 863 aa23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 ZGPATQ8N5A5 531 aaKnown RBP23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 NEK1Q96PY6 1258 aa23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 STRBPQ96SI9 672 aaKnown RBP23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 GGA1Q9UJY5 639 aa23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 CIZ1Q9ULV3 898 aaPredicted RBP23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 MAST2Q6P0Q8 1798 aa23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 ATP2B4P23634 1241 aa23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 SP8Q8IXZ3 490 aa23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 RAI14Q9P0K7 980 aa23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 CTNNA3Q9UI47 895 aa23.43■■□□□ 1.34
TNFRSF1A-201ENST00000162749 LARP6Q9BRS8 491 aaKnown RBP23.42■■□□□ 1.34
TNFRSF1A-201ENST00000162749 LIMCH1Q9UPQ0 1083 aa23.42■■□□□ 1.34
TNFRSF1A-201ENST00000162749 ATP6V0A2Q9Y487 856 aa23.42■■□□□ 1.34
TNFRSF1A-201ENST00000162749 MBD4O95243 580 aa23.41■■□□□ 1.34
TNFRSF1A-201ENST00000162749 ADGRA1Q86SQ6 560 aa23.41■■□□□ 1.34
TNFRSF1A-201ENST00000162749 MASTLQ96GX5 879 aa23.41■■□□□ 1.34
TNFRSF1A-201ENST00000162749 TCEANC2Q96MN5 208 aa23.41■■□□□ 1.34
TNFRSF1A-201ENST00000162749 POLLQ9UGP5 575 aa23.41■■□□□ 1.34
TNFRSF1A-201ENST00000162749 ALDH1B1P30837 517 aa23.41■■□□□ 1.34
TNFRSF1A-201ENST00000162749 TBC1D16Q8TBP0 767 aa23.41■■□□□ 1.34
TNFRSF1A-201ENST00000162749 ZNF804AQ7Z570 1209 aa23.4■■□□□ 1.34
TNFRSF1A-201ENST00000162749 ZNF384Q8TF68 577 aa23.4■■□□□ 1.34
TNFRSF1A-201ENST00000162749 KIAA1551Q9HCM1 1747 aa23.4■■□□□ 1.34
TNFRSF1A-201ENST00000162749 DUOX1Q9NRD9 1551 aa23.4■■□□□ 1.34
TNFRSF1A-201ENST00000162749 E7EWF7 191 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms