RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 RragbQ6NTA4 374 aa20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Depdc1bQ8BH88 529 aa20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Hirip3Q8BLH7 601 aa20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Ankfy1Q810B6 1169 aa20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Nucb1Q02819 459 aaKnown RBP20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Clec16aQ80U30 1036 aa20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Pym1Q8CHP5 203 aaKnown RBP20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Igbp1Q61249 340 aa20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Dclk3Q8BWQ5 790 aa20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 ZgpatQ8VDM1 511 aa20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Cct5P80316 541 aaKnown RBP20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 HhatQ8BMT9 499 aa20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Wdr46Q9Z0H1 622 aaKnown RBP20.53■□□□□ 0.88
Trim71-201ENSMUST00000111816 Proca1B0QZF7 307 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 Chmp6P0C0A3 200 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 Msl1Q6PDM1 616 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 SfswapQ3USH5 945 aaKnown RBP20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 KaznQ69ZS8 779 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 Egfem1Q8C088 590 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 MpripP97434 1024 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 Vps16Q920Q4 839 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 NapgQ9CWZ7 312 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 Gm1993A6X8I0 212 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 SlxD3Z347 212 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 Taf4E9QAP7 1042 aaKnown RBP20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 Plcb3P51432 1234 aaKnown RBP20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 Tbc1d8bA3KGB4 1114 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 Ppp2r1aQ76MZ3 589 aa20.52■□□□□ 0.88
Trim71-201ENSMUST00000111816 Stk38lQ7TSE6 464 aa20.52■□□□□ 0.87
Trim71-201ENSMUST00000111816 Zfp597E9Q6S0 419 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Carmil1Q6EDY6 1374 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 U2af2P26369 475 aaKnown RBP20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Taco1Q8K0Z7 294 aaKnown RBP20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Ttc1Q91Z38 292 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Tex9Q9D845 387 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Arhgap5P97393 1501 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Rrs1Q9CYH6 365 aaKnown RBP20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Tmod2Q9JKK7 351 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Cabp2Q9JLK4 216 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Samd15F6XZJ7 620 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Gm5862K7N5V5 267 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Gm10220K7N660 267 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Znf280dQ68FE8 974 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Gzf1Q4VBD9 706 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Stx3Q64704 289 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Mrps26Q80ZS3 200 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Rab11fip4Q8BQP8 635 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Eef1bO70251 225 aaKnown RBP20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 EvcP57680 1005 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Gm17615E9Q9P2 165 aa20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Cct2P80314 535 aaKnown RBP20.51■□□□□ 0.87
Trim71-201ENSMUST00000111816 Krt18P05784 423 aa20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 IbtkQ6ZPR6 1352 aaKnown RBP20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 Ppp1r12bQ8BG95 976 aa20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 NeblQ0II04 452 aa20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 Fbxo41Q6NS60 873 aa20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 NgdnQ9DB96 315 aaKnown RBP20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 Gkap1Q9JMB0 366 aa20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 Rnf40Q3U319 1001 aa20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 Tsr1Q5SWD9 803 aa20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 Cabs1Q8C633 391 aa20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 4930572O03RikQ8C5Y0 211 aa20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 Pak2Q8CIN4 524 aa20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 Rps6ka2Q9WUT3 733 aa20.5■□□□□ 0.87
Trim71-201ENSMUST00000111816 Nom1Q3UFM5 854 aaKnown RBP20.49■□□□□ 0.87
Trim71-201ENSMUST00000111816 Arid3aQ62431 601 aa20.49■□□□□ 0.87
Trim71-201ENSMUST00000111816 Ice1E9Q286 2241 aaKnown RBP20.49■□□□□ 0.87
Trim71-201ENSMUST00000111816 Kif17Q99PW8 1038 aa20.49■□□□□ 0.87
Trim71-201ENSMUST00000111816 Tyro3P55144 880 aa20.49■□□□□ 0.87
Trim71-201ENSMUST00000111816 Apol10bG3X9K7 334 aa20.49■□□□□ 0.87
Trim71-201ENSMUST00000111816 Rhobtb1Q9DAK3 695 aa20.49■□□□□ 0.87
Trim71-201ENSMUST00000111816 Gm2030D3Z7C4 212 aa20.49■□□□□ 0.87
Trim71-201ENSMUST00000111816 Puf60Q3UEB3 564 aaKnown RBP20.49■□□□□ 0.87
Trim71-201ENSMUST00000111816 Ppfia4B8QI36 1187 aa20.49■□□□□ 0.87
Trim71-201ENSMUST00000111816 Ankrd40Q5SUE8 363 aa20.48■□□□□ 0.87
Trim71-201ENSMUST00000111816 Traf3ip3Q8C0G2 513 aa20.48■□□□□ 0.87
Trim71-201ENSMUST00000111816 Spata16Q8C636 571 aa20.48■□□□□ 0.87
Trim71-201ENSMUST00000111816 Tcerg1lQ3B807 590 aa20.48■□□□□ 0.87
Trim71-201ENSMUST00000111816 Ercc5P35689 1170 aa20.48■□□□□ 0.87
Trim71-201ENSMUST00000111816 Rab34Q64008 259 aa20.48■□□□□ 0.87
Trim71-201ENSMUST00000111816 Slc30a9Q5IRJ6 567 aa20.48■□□□□ 0.87
Trim71-201ENSMUST00000111816 Sept10Q8C650 452 aa20.48■□□□□ 0.87
Trim71-201ENSMUST00000111816 Iqcj-Schip1A0A088MLT8 559 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Ncf2O70145 525 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Schip1P0DPB4 484 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Rpl13P47963 211 aaKnown RBP20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Apaf1O88879 1249 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Asic1Q6NXK8 526 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Cc2d2bA0A286YDU8 1405 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 TrdnE9Q9K5 693 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 E330034G19RikQ3UWX6 351 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Ankrd6Q69ZU8 712 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Snd1Q78PY7 910 aaKnown RBP20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Ccdc50Q810U5 305 aaKnown RBP20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Krt222Q8CCX5 294 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Hs6st3Q9QYK4 470 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Sycp2lA0A0M3U1B0 842 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Zc3h18Q0P678 948 aaKnown RBP20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Cnnm2Q3TWN3 875 aa20.47■□□□□ 0.87
Trim71-201ENSMUST00000111816 Dennd6aQ8BH65 605 aa20.47■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 70.6 ms