RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Adam1aQ60813 791 aa8.68□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Trim56Q80VI1 734 aaKnown RBP8.68□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Jmjd4Q8BFT6 427 aa8.68□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Wasf1Q8R5H6 559 aa8.68□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Gigyf1Q99MR1 1044 aaKnown RBP8.68□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Sp8Q8BMJ8 486 aa8.68□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Tpcn2Q8BWC0 731 aa8.68□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Cadps2Q8BYR5 1297 aa8.68□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Q8BZJ8 459 aa8.68□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Rbm42Q91V81 474 aaKnown RBP8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Naa16Q9DBB4 864 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Acot9Q9R0X4 439 aaKnown RBP8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Myo5bP21271 1818 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Nid2O88322 1403 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Acnat2Q8BGG9 420 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Ccdc150Q8CDI7 1110 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Pcdhb22Q91XZ8 794 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Ciao1Q99KN2 339 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Ccdc39Q9D5Y1 937 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Plekho1Q9JIY0 408 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Zeb2Q9R0G7 1215 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Speer4f2E9Q366 295 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Prl7d1P04769 244 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Tnni2P13412 182 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Atp8a2P98200 1148 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Gm28047Q3US59 414 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 VeztQ3ZK22 780 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Nlrp9aQ66X03 949 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Smarcc2Q6PDG5 1213 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Znf653Q6YND2 615 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Cep120Q7TSG1 988 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Pcdhb15Q91Y04 786 aa8.67□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Atp2b1G5E829 1220 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Cops6O88545 324 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Prdm1Q60636 856 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Lmod1Q8BVA4 595 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Nop2Q922K7 793 aaKnown RBP8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Gnl2Q99LH1 728 aaKnown RBP8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Gtpbp4Q99ME9 634 aaKnown RBP8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Yeats4Q9CR11 227 aaKnown RBP8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Ehd4Q9EQP2 541 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Speer4dL7N216 212 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Dapk3O54784 448 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 TbcaP48428 108 aaKnown RBP8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Mns1Q61884 491 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Tbc1d30Q69ZT9 766 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Kcnk13Q8R1P5 405 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Snw1Q9CSN1 536 aaKnown RBP8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Zscan20B2KFW1 1030 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Pla2g4fQ50L41 855 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Bag1Q60739 355 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Atg9aQ68FE2 551 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Kcnf1Q7TSH7 493 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Rapgef3Q8VCC8 918 aa8.66□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Ces1hD3Z298 562 aa8.65□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Dnaaf2Q8BPI1 814 aa8.65□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Zfp202Q8C879 641 aa8.65□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Fam84aQ9D650 292 aa8.65□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Lmtk3Q5XJV6 1424 aa8.65□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Frat1P70339 274 aa8.65□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Fam170aQ66LM6 333 aa8.65□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Abcf1Q6P542 837 aaKnown RBP8.65□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Scn7aB1AYL1 1681 aa8.65□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Als2Q920R0 1651 aa8.65□□□□□ -1.02
Bdnf-207ENSMUST00000111047 Cyp3a57D3YYZ0 503 aa8.65□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ampd3O08739 766 aa8.65□□□□□ -1.03
Bdnf-207ENSMUST00000111047 U2af2P26369 475 aaKnown RBP8.65□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ripply1Q2WG77 201 aa8.65□□□□□ -1.03
Bdnf-207ENSMUST00000111047 IqcgQ80W32 419 aa8.65□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Lrrc8aQ80WG5 810 aa8.65□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Trim29Q8R2Q0 587 aa8.65□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Lrrc2Q8VDB8 371 aa8.65□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ltb4r2Q9JJL9 360 aa8.65□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Mast3Q3U214 1321 aa8.65□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Nfat5Q9WV30 1534 aa8.65□□□□□ -1.03
Bdnf-207ENSMUST00000111047 AK157302I3ITR1 129 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Dync1i1O88485 628 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 NefhP19246 1090 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Nxf2Q4ZGD8 691 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Drc7Q6V3W6 876 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ccp110Q7TSH4 1004 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Iqca1Q9CUL5 857 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ifi35Q9D8C4 286 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Isca1Q9D924 129 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Clic4Q9QYB1 253 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Aox4Q3TYQ9 1336 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Sycp2lA0A0M3U1B0 842 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Kansl3A2RSY1 903 aaKnown RBP8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Gm20425E9Q035 978 aaKnown RBP8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 SrprbP47758 269 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Exosc10P56960 887 aaKnown RBP8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Eif5P59325 429 aaKnown RBP8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Cep63Q3UPP8 700 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ehmt1Q5DW34 1296 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Slf2Q6P9P0 1278 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Larp6Q8BN59 492 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Mapk8ip1Q9WVI9 707 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ubap1lG3UW59 384 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ccdc102aQ3TMW1 549 aa8.64□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Itga6Q61739 1091 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms