RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 ZyxQ62523 564 aa20.71■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Edrf1Q6GQV7 1239 aa20.71■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Xpo4Q9ESJ0 1151 aa20.71■□□□□ 0.91
Ptpra-201ENSMUST00000028769 Acot9Q9R0X4 439 aaKnown RBP20.71■□□□□ 0.91
Ptpra-201ENSMUST00000028769 TsksO54887 585 aa20.7■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Cyp2d9P11714 504 aa20.7■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Trim52Q8CDV4 233 aa20.7■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Frat2Q8K025 231 aa20.7■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Plcd3Q8K2J0 785 aa20.7■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Washc4Q3UMB9 1173 aa20.7■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Tmem266Q8BZB3 538 aa20.7■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Rdm1Q9CQK3 281 aa20.7■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Popdc2Q9ES82 367 aa20.7■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Tcof1O08784 1320 aaKnown RBP20.7■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Samsn1P57725 372 aa20.69■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Amigo3Q8C2S7 508 aa20.69■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Lrrc59Q922Q8 307 aaKnown RBP20.69■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Stxbp4Q9WV89 557 aa20.69■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Zfp202Q8C879 641 aa20.69■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Magi2Q9WVQ1 1275 aa20.69■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Lekr1B2RVN1 116 aa20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Gtf2f1Q3THK3 508 aaKnown RBP20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Gm12185Q5NCB2 835 aa20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Cyp7a1Q64505 503 aa20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Map10Q8BJS7 891 aa20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Znf568E9PYI1 671 aa20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Tnni2P13412 182 aa20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Adam1bQ8R534 806 aa20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Sos2Q02384 1333 aa20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Cyp26a1O55127 497 aa20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Agtpbp1Q641K1 1218 aa20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Ncaph2Q8BSP2 607 aa20.68■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Cyp3a57D3YYZ0 503 aa20.67■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Rrp1P56183 494 aaKnown RBP20.67■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Trim59Q922Y2 403 aa20.67■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Efcc1Q9JJF6 558 aa20.67■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Metap2O08663 478 aaKnown RBP20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Nlrp9aQ66X03 949 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Sptlc3Q8BG54 563 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Kcnj14Q8JZN3 434 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Elf2Q9JHC9 593 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Zhx1P70121 873 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Pfkfb1P70266 471 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Cep120Q7TSG1 988 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Cyp19a1P28649 503 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Fam102bQ8BQS4 339 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Tpcn2Q8BWC0 731 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 9230110C19RikQ8CC70 267 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Bcl11bQ99PV8 884 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Odf2lQ9D478 642 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Cdc45Q9Z1X9 566 aa20.66■□□□□ 0.9
Ptpra-201ENSMUST00000028769 CrcpO35427 148 aa20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Nom1Q3UFM5 854 aaKnown RBP20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Clca2Q8BG22 942 aa20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Q8BT18 775 aa20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 IcoslgQ9JHJ8 322 aa20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Wdr64Q9D565 1086 aa20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Zbtb43Q9DAI4 467 aa20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Atp12aQ9Z1W8 1035 aa20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Plekhd1B2RPU2 505 aa20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Cops6O88545 324 aa20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 LtkP08923 888 aa20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Ssfa2Q922B9 1252 aa20.65■□□□□ 0.9
Ptpra-201ENSMUST00000028769 Znf326O88291 580 aa20.64■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Cdk4P30285 303 aa20.64■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Appbp2Q9DAX9 585 aa20.64■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Ces1hD3Z298 562 aa20.64■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Bin2D3Z6Q9 489 aa20.64■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Pald1P70261 859 aa20.64■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Zfp397Q7TNK4 527 aa20.64■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Taf3Q5HZG4 932 aa20.63■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Ces1dQ8VCT4 565 aa20.63■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Mei1Q9D4I2 1268 aa20.63■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Pik3ap1Q9EQ32 811 aa20.63■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Tmem109Q3UBX0 243 aa20.63■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Vps16Q920Q4 839 aa20.63■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Itga6Q61739 1091 aa20.62■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Eaf2Q91ZD6 262 aa20.62■□□□□ 0.89
Ptpra-201ENSMUST00000028769 CoblQ5NBX1 1337 aaKnown RBP20.62■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Npc1l1Q6T3U4 1333 aa20.62■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Diaph1O08808 1255 aa20.62■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Slc1a4O35874 532 aa20.62■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Mei4Q8BRM6 389 aa20.62■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Srek1Q8BZX4 494 aaKnown RBP20.62■□□□□ 0.89
Ptpra-201ENSMUST00000028769 ImmtQ8CAQ8 757 aaKnown RBP20.62■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Suclg2Q9Z2I8 433 aa20.62■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Pcdhb9E9Q5G2 828 aa20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 HdgfP51859 237 aaKnown RBP20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Ctdspl2Q8BG15 465 aa20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Zbtb1Q91VL9 713 aa20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Gnl2Q99LH1 728 aaKnown RBP20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Ddx60E9PZQ1 1711 aa20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Tns2Q8CGB6 1400 aa20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Gm10134F6ZQC6 126 aa20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Dctn1O08788 1281 aa20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Zbtb7aO88939 569 aaKnown RBP20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Grin1P35438 938 aa20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Gm20425E9Q035 978 aaKnown RBP20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 SrprbP47758 269 aa20.61■□□□□ 0.89
Ptpra-201ENSMUST00000028769 Trim25Q61510 634 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms