RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 IGLV1-47P01700 117 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 FAM90A15PP0C7V4 464 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 FAM90A13PP0C7W8 464 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 FAM90A14PP0C7W9 464 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 FAM90A24PP0C7X0 464 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 ATP6V1E1P36543 226 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 MEF2CQ06413 473 aaPredicted RBP10.78□□□□□ -0.68
SNX1-214ENST00000625244 FOXE3Q13461 319 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 RIPK1Q13546 671 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 GPR50Q13585 617 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 TEX30Q5JUR7 227 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 TPTE2P1Q5T6R2 138 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 MEDAGQ5VYS4 303 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 DHRSXQ8N5I4 330 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 TPRX1Q8N7U7 411 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 SETD9Q8NE22 299 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 BBS1Q8NFJ9 593 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 ST6GALNAC6Q969X2 333 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 Q96MT0 163 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 MBOAT4Q96T53 435 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 FAM118AQ9NWS6 357 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 CLN6Q9NWW5 311 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 KIAA1456Q9P272 454 aa10.78□□□□□ -0.68
SNX1-214ENST00000625244 WARS2Q9UGM6 360 aaKnown RBP10.78□□□□□ -0.68
SNX1-214ENST00000625244 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.78□□□□□ -0.68
SNX1-214ENST00000625244 RRP15Q9Y3B9 282 aaKnown RBP10.78□□□□□ -0.68
SNX1-214ENST00000625244 hADV38S2A0JD32 116 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 LY6LH3BQJ8 138 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 PSMD9O00233 223 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 NOS1APO75052 506 aaPredicted RBP10.77□□□□□ -0.69
SNX1-214ENST00000625244 ATP6V1G2O95670 118 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 TMED1Q13445 227 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 EDDM3AQ14507 147 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 LINC01590Q5TEZ4 76 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 FAM71E2Q8N5Q1 922 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 ZNF454Q8N9F8 522 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 OR5A2Q8NGI9 324 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 OR1N2Q8NGR9 330 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 ZNF596Q8TC21 504 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 DCUN1D4Q92564 292 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 CNN2Q99439 309 aaKnown RBP10.77□□□□□ -0.69
SNX1-214ENST00000625244 TEAD3Q99594 435 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 HES4Q9HCC6 221 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 RETNQ9HD89 108 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 LAMP5Q9UJQ1 280 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 LINC00312Q9Y6C7 94 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 TMEM14AQ9Y6G1 99 aa10.77□□□□□ -0.69
SNX1-214ENST00000625244 DNAH17Q9UFH2 4485 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 OR5B21A6NL26 309 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 BUB1B-PAK6H3BSN5 160 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 SLC16A6O15403 523 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 FGF16O43320 207 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 SELENOFO60613 162 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 APOC1P02654 83 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 LYNP07948 512 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 ELANEP08246 267 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 MRPL3P09001 348 aaKnown RBP10.76□□□□□ -0.69
SNX1-214ENST00000625244 OR8U8P0C7N1 319 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 SLC2A5P22732 501 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 CNTFRP26992 372 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 HTR1FP30939 366 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 MNDAP41218 407 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 SNRPGP62308 76 aaKnown RBP10.76□□□□□ -0.69
SNX1-214ENST00000625244 EFNB1P98172 346 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 HNF4GQ14541 408 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 PRAMEF5Q5TYX0 476 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 AADACL4Q5VUY2 407 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 KRT74Q7RTS7 529 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 RTN4RL2Q86UN3 420 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 THNSL2Q86YJ6 484 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.76□□□□□ -0.69
SNX1-214ENST00000625244 OR8H2Q8N162 312 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 THEM6Q8WUY1 208 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 RNF133Q8WVZ7 376 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 AMELYQ99218 206 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 MNTQ99583 582 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 YIPF3Q9GZM5 350 aa10.76□□□□□ -0.69
SNX1-214ENST00000625244 TMEM82A0PJX8 343 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 AP4M1O00189 453 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 OVOL1O14753 267 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 OPRL1P41146 370 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 HAAOP46952 286 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 HSPA13P48723 471 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 CCDC144NLQ6NUI1 221 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 MOB3CQ70IA8 216 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 BCDIN3DQ7Z5W3 292 aaKnown RBP10.75□□□□□ -0.69
SNX1-214ENST00000625244 LYPD6Q86Y78 171 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 OR6Q1Q8NGQ2 317 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 OR56B4Q8NH76 319 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 OTOSQ8NHW6 89 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 ASB17Q8WXJ9 295 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 MYCBPQ99417 103 aaPredicted RBP10.75□□□□□ -0.69
SNX1-214ENST00000625244 ADI1Q9BV57 179 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 ZNF286AQ9HBT8 521 aa10.75□□□□□ -0.69
SNX1-214ENST00000625244 CCDC182A6NF36 153 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 ZNF670-ZNF695F2Z2N8 137 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 H0YJX3 145 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 J3QT63 122 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 H2BFMP0C1H6 154 aa10.74□□□□□ -0.69
SNX1-214ENST00000625244 TMEM11P17152 192 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms