RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 IGFL3Q6UXB1 125 aa16.83■□□□□ 0.28
PCDHB11-202ENST00000624887 C1orf162Q8NEQ5 155 aaPredicted RBP16.83■□□□□ 0.28
PCDHB11-202ENST00000624887 GTF3AQ92664 365 aaKnown RBP16.83■□□□□ 0.28
PCDHB11-202ENST00000624887 PHYHIPLQ96FC7 376 aa16.83■□□□□ 0.28
PCDHB11-202ENST00000624887 CXorf58Q96LI9 332 aa16.83■□□□□ 0.28
PCDHB11-202ENST00000624887 SLC25A32Q9H2D1 315 aa16.83■□□□□ 0.28
PCDHB11-202ENST00000624887 MEMO1Q9Y316 297 aa16.83■□□□□ 0.28
PCDHB11-202ENST00000624887 SHANK1Q9Y566 2161 aa16.83■□□□□ 0.28
PCDHB11-202ENST00000624887 TRIM77I1YAP6 450 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 J3QT63 122 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 KCNAB3O43448 404 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 PET100P0DJ07 73 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 AADACP22760 399 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 DUSP1P28562 367 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 RAB32Q13637 225 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 IGSF11Q5DX21 431 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 FAM76BQ5HYJ3 339 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 PDZD9Q8IXQ8 264 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 FAM58AQ8N1B3 248 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 RBPMSQ93062 196 aaKnown RBP16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 ZNF488Q96MN9 340 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 RTL8AQ9BWD3 113 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 RHOFQ9HBH0 211 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 SLC2A9Q9NRM0 540 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 ESPL1Q14674 2120 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 RAC2P15153 192 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 CBR1P16152 277 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 UCP2P55851 309 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 HERV-K104P61576 105 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 TSC22D1Q15714 1073 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 GALNT11Q8NCW6 608 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 RRNAD1Q96FB5 475 aaKnown RBP16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 DMRTA2Q96SC8 542 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 RSRP1Q9BUV0 290 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 REG4Q9BYZ8 158 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 PLSCR4Q9NRQ2 329 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 RASL12Q9NYN1 266 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 OR5AC2Q9NZP5 309 aa16.82■□□□□ 0.28
PCDHB11-202ENST00000624887 F5H0A9 414 aaPredicted RBP16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 SCO1O75880 301 aa16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 PPYP01298 95 aa16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 IGKV3-15P01624 115 aa16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 ZP3P21754 424 aa16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 TMEM187Q14656 261 aa16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 SUMF2Q8NBJ7 301 aa16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 OR1S1Q8NH92 325 aa16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 SYT3Q9BQG1 590 aa16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 SUCNR1Q9BXA5 334 aa16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 RIMS4Q9H426 269 aaPredicted RBP16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 GSKIPQ9P0R6 139 aa16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 CEP250Q9BV73 2442 aa16.81■□□□□ 0.28
PCDHB11-202ENST00000624887 MFSD2BA6NFX1 497 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 RHBDL1O75783 438 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 IFNA21P01568 189 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 GLAP06280 429 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 OR5AC1P0C628 307 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 SPINK2P20155 84 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 HOXC12P31275 282 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 ERVS71-1P61550 626 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 FOXF2Q12947 444 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 IAH1Q2TAA2 248 aaPredicted RBP16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 PHLDA2Q53GA4 152 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 LRTM2Q8N967 370 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 WDR31Q8NA23 367 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 SLC25A40Q8TBP6 338 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 NEK7Q8TDX7 302 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 AIFM2Q9BRQ8 373 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 IFT22Q9H7X7 185 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 SDHAF2Q9NX18 166 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 DKK4Q9UBT3 224 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 LRP5LA4QPB2 252 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 IQCF6A8MYZ5 107 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 HSPB6O14558 160 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 HOXD4P09016 255 aaPredicted RBP16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 FOXC1Q12948 553 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 GGNBP1Q5YKI7 109 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 RELL2Q8NC24 303 aaPredicted RBP16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 OR5T2Q8NGG2 359 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 OR1J1Q8NGS3 322 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 AQP10Q96PS8 301 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 DNAJB11Q9UBS4 358 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 PFDN2Q9UHV9 154 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 TUBD1Q9UJT1 453 aa16.8■□□□□ 0.28
PCDHB11-202ENST00000624887 TRAV24A0A0B4J272 114 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 KIR2DS1A0A191URI9 304 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 PTPRZ1P23471 2315 aaPredicted RBP16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 NUP62P37198 522 aaPredicted RBP16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 KIR2DS4P43632 304 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 KIR2DS1Q14954 304 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 SP6Q3SY56 376 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 ZNF585AQ6P3V2 769 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 WDR86Q86TI4 376 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 C17orf78Q8N4C9 275 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 CCDC71LQ8N9Z2 235 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 STOML3Q8TAV4 291 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 MRPL24Q96A35 216 aaKnown RBP16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 ATP23Q9Y6H3 246 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 CFAP47Q6ZTR5 3102 aa16.79■□□□□ 0.28
PCDHB11-202ENST00000624887 TRBV6-6A0A0A6YYG2 114 aa16.78■□□□□ 0.28
PCDHB11-202ENST00000624887 TRDCB7Z8K6 153 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms