RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 E9PQ18 207 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 M0R129 80 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 MMP23AO75900 390 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 LPLP06858 475 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 DBTP11182 482 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 PTGFRP43088 359 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 RASSF2P50749 326 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 HLA-DRB5Q30154 266 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 TMEM95Q3KNT9 176 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 TCTEX1D4Q5JR98 221 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 CCDC121Q6ZUS5 278 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 OSR2Q8N2R0 312 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 EME1Q96AY2 570 aa14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 ADAT3Q96EY9 351 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 AMMECR1Q9Y4X0 333 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-227ENST00000602011 ODAMA1E959 279 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 LY6LH3BQJ8 138 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 SIRPB1O00241 398 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 JUNBP17275 347 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 EGFEM1PQ0D2K5 195 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 SLC25A30Q5SVS4 291 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 TPTE2P1Q5T6R2 138 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 SLC16A12Q6ZSM3 486 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 RDH10Q8IZV5 341 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 OR9G1Q8NH87 305 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 CIB1Q99828 191 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 GABARAPL3Q9BY60 117 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 ZFP57Q9NU63 452 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 IL36RNQ9UBH0 155 aa14.2□□□□□ -0.14
SHKBP1-227ENST00000602011 H3BSH0 61 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 K7EIL1 84 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 DEGS1O15121 323 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 ATP5HO75947 161 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 ZNF44P15621 663 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 KIR3DL2P43630 455 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 GLIPR1P48060 266 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 ZNF85Q03923 595 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 AESQ08117 197 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 DEFB121Q5J5C9 76 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 KRBOX4Q5JUW0 171 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 PRAMEF5Q5TYX0 476 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 MEDAGQ5VYS4 303 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 COMMD1Q8N668 190 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 CPNE2Q96FN4 548 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 FRRS1LQ9P0K9 344 aa14.19□□□□□ -0.14
SHKBP1-227ENST00000602011 KBTBD11-OT1A0A1B0GTJ5 212 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 FAM90A18PA6NE21 464 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 FAM90A16PA6NEW6 464 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 FAM90A20PA6NIJ5 464 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 FAM90A9PA6NNJ1 464 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 FAM90A12PA8MX19 464 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 FAM90A5PA8MXJ8 464 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 SLC16A6O15403 523 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 AMY1AP04745 511 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 AMY2AP04746 511 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 HTR1AP08908 422 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 FAM90A15PP0C7V4 464 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 FAM90A13PP0C7W8 464 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 FAM90A14PP0C7W9 464 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 FAM90A24PP0C7X0 464 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 C21orf33P30042 268 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 GP2P55259 537 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 TP53I3Q53FA7 332 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 OR10A7Q8NGE5 316 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 OR5D14Q8NGL3 314 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 CHPT1Q8WUD6 406 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 RPEQ96AT9 228 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 CENPNQ96H22 339 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 HRASLS5Q96KN8 279 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 BARHL1Q9BZE3 327 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 RIBC2Q9H4K1 309 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 ZCCHC4Q9H5U6 513 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 INPP5EQ9NRR6 644 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 MOB4Q9Y3A3 225 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 HSPE1-MOB4S4R3N1 261 aa14.18□□□□□ -0.14
SHKBP1-227ENST00000602011 DAPL1A0PJW8 107 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 PSMB11A5LHX3 300 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 FGF16O43320 207 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 CD24P25063 80 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 KCNJ3P48549 501 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 MTNR1BP49286 362 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 MRPL28Q13084 256 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 Q6P435 159 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 SERPINA12Q8IW75 414 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 ACBD7Q8N6N7 88 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 HAVCR2Q8TDQ0 301 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 RNF166Q96A37 237 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 LINC00574Q9H8X3 128 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 ZNF286AQ9HBT8 521 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 IMPAD1Q9NX62 359 aa14.17□□□□□ -0.14
SHKBP1-227ENST00000602011 TENM3Q9P273 2699 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 IGKV1-12A0A0C4DH73 117 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 APOL3O95236 402 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 IGKV1D-12P01611 117 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 CGB3P0DN86 165 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 CGB7P0DN87 165 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 POLR2IP36954 125 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 RAB7AP51149 207 aa14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 SNU13P55769 128 aaKnown RBP14.16□□□□□ -0.14
SHKBP1-227ENST00000602011 SLC35B1P78383 322 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms