RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 YIF1BQ5BJH7 314 aa18.35■□□□□ 0.53
CCDC9-204ENST00000599398 Q6P435 159 aa18.35■□□□□ 0.53
CCDC9-204ENST00000599398 SLITRK2Q9H156 845 aa18.35■□□□□ 0.53
CCDC9-204ENST00000599398 MEGF9Q9H1U4 602 aa18.35■□□□□ 0.53
CCDC9-204ENST00000599398 UBE2J1Q9Y385 318 aaPredicted RBP18.35■□□□□ 0.53
CCDC9-204ENST00000599398 SESN1Q9Y6P5 492 aa18.35■□□□□ 0.53
CCDC9-204ENST00000599398 TRBV5-5A0A0J9YX44 114 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 SLC33A1O00400 549 aaPredicted RBP18.34■□□□□ 0.53
CCDC9-204ENST00000599398 CLPXO76031 633 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 ALDOBP05062 364 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 BDKRB2P30411 391 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 ZNF93P35789 620 aaPredicted RBP18.34■□□□□ 0.53
CCDC9-204ENST00000599398 OR3A4PP47883 348 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 GLIPR1P48060 266 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 WNT4P56705 351 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 RIPK1Q13546 671 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 ATXN7L3Q14CW9 347 aaPredicted RBP18.34■□□□□ 0.53
CCDC9-204ENST00000599398 Q499Y3 187 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 PLA1AQ53H76 456 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 ELP2Q6IA86 826 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 PGLYRP3Q96LB9 341 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 CKLFQ9UBR5 152 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 ING4Q9UNL4 249 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 RNF114Q9Y508 228 aa18.34■□□□□ 0.53
CCDC9-204ENST00000599398 ODF3BA8MYP8 253 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 H0YJX3 145 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 HSPB6O14558 160 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 CDRT1O95170 752 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 HTR3BO95264 441 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 TGFBR2P37173 567 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 PTGFRP43088 359 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 AQP4P55087 323 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 KRBOX4Q5JUW0 171 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 ZNF626Q68DY1 528 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 Q6ZSV7 163 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 OR11H6Q8NGC7 330 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 LINC01006Q8NI28 216 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 NRG4Q8WWG1 115 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 WFDC12Q8WWY7 111 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 S100A13Q99584 98 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 GAL3ST2Q9H3Q3 398 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 ERGIC3Q9Y282 383 aa18.33■□□□□ 0.52
CCDC9-204ENST00000599398 TBL2Q9Y4P3 447 aaKnown RBP18.33■□□□□ 0.52
CCDC9-204ENST00000599398 CELP19835 753 aa18.32■□□□□ 0.52
CCDC9-204ENST00000599398 RPS11P62280 158 aaKnown RBP eCLIP18.32■□□□□ 0.52
CCDC9-204ENST00000599398 AANATQ16613 207 aa18.32■□□□□ 0.52
CCDC9-204ENST00000599398 PAN3Q58A45 887 aaKnown RBP18.32■□□□□ 0.52
CCDC9-204ENST00000599398 FOXRED1Q96CU9 486 aaPredicted RBP18.32■□□□□ 0.52
CCDC9-204ENST00000599398 OR14A2Q96R54 314 aa18.32■□□□□ 0.52
CCDC9-204ENST00000599398 METTL9Q9H1A3 318 aa18.32■□□□□ 0.52
CCDC9-204ENST00000599398 TMEM133Q9H2Q1 129 aa18.32■□□□□ 0.52
CCDC9-204ENST00000599398 IGHV2-26A0A0B4J1V2 119 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 A0A1W2PPK0 400 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 ODAMA1E959 279 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 FAM90A8PA6NJQ4 464 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 PTGES3LE9PB15 166 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 MMP23AO75900 390 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 CSN2P05814 226 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 SRSF4Q08170 494 aaKnown RBP18.31■□□□□ 0.52
CCDC9-204ENST00000599398 IL13RA2Q14627 380 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 FAM189A2Q15884 450 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 SSX2Q16385 188 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 PIGYQ3MUY2 71 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 PRAMEF5Q5TYX0 476 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 NANOGP1Q8N7R0 232 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 OR51T1Q8NGJ9 327 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 COQ2Q96H96 371 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 ZNF184Q99676 751 aaPredicted RBP18.31■□□□□ 0.52
CCDC9-204ENST00000599398 FKBP14Q9NWM8 211 aa18.31■□□□□ 0.52
CCDC9-204ENST00000599398 TRAV8-7A0A075B6U6 113 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 CSTBP04080 98 aaKnown RBP18.3■□□□□ 0.52
CCDC9-204ENST00000599398 IGFBP3P17936 291 aaPredicted RBP18.3■□□□□ 0.52
CCDC9-204ENST00000599398 CDK2P24941 298 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 C6orf141Q5SZD1 244 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 BRICD5Q6PL45 260 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 ASCL4Q6XD76 172 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 DYNAPQ8N1N2 210 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 NDNFQ8TB73 568 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 CORO2AQ92828 525 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 MALSU1Q96EH3 234 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 CLEC7AQ9BXN2 247 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 PPIL3Q9H2H8 161 aaKnown RBP18.3■□□□□ 0.52
CCDC9-204ENST00000599398 ABCB10Q9NRK6 738 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 SCN3BQ9NY72 215 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 TAS2R3Q9NYW6 316 aa18.3■□□□□ 0.52
CCDC9-204ENST00000599398 MAGEA13PA6NCF6 341 aa18.29■□□□□ 0.52
CCDC9-204ENST00000599398 CDK1P06493 297 aa18.29■□□□□ 0.52
CCDC9-204ENST00000599398 SERPINA2P20848 420 aa18.29■□□□□ 0.52
CCDC9-204ENST00000599398 OR52W1Q6IF63 320 aa18.29■□□□□ 0.52
CCDC9-204ENST00000599398 MYDGFQ969H8 173 aa18.29■□□□□ 0.52
CCDC9-204ENST00000599398 MND1Q9BWT6 205 aa18.29■□□□□ 0.52
CCDC9-204ENST00000599398 C16orf95Q9H693 158 aa18.29■□□□□ 0.52
CCDC9-204ENST00000599398 PAK1IP1Q9NWT1 392 aaPredicted RBP18.29■□□□□ 0.52
CCDC9-204ENST00000599398 ST3GAL6Q9Y274 331 aa18.29■□□□□ 0.52
CCDC9-204ENST00000599398 HILPDAQ9Y5L2 63 aa18.29■□□□□ 0.52
CCDC9-204ENST00000599398 MGAM2Q2M2H8 2515 aa18.29■□□□□ 0.52
CCDC9-204ENST00000599398 TRBV5-7A0A0A0MS05 114 aa18.28■□□□□ 0.52
CCDC9-204ENST00000599398 TRAV24A0A0B4J272 114 aa18.28■□□□□ 0.52
CCDC9-204ENST00000599398 FAM172BPA6NC97 362 aa18.28■□□□□ 0.52
CCDC9-204ENST00000599398 GPX5O75715 221 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms