RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 OR2AT4A6NND4 320 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 K7EIL1 84 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 CCRL2O00421 344 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 RHBDL1O75783 438 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 PSG2P11465 335 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 IGLL1P15814 213 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 PSMA1P25786 263 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 MAPK3P27361 379 aaPredicted RBP13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 RAB13P51153 203 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 CNN3Q15417 329 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 CEACAM21Q3KPI0 293 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 KRT74Q7RTS7 529 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 NDUFA11Q86Y39 141 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 FAM185AQ8N0U4 392 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 DYNAPQ8N1N2 210 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 WFDC9Q8NEX5 89 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 OR5A2Q8NGI9 324 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 HPSE2Q8WWQ2 592 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 TMEM106AQ96A25 262 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 CHST5Q9GZS9 411 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 ZCCHC4Q9H5U6 513 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 CKLFQ9UBR5 152 aa13.29□□□□□ -0.28
SHKBP1-215ENST00000597649 FAM230AA0A1W2PPH8 454 aa13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 OR5B21A6NL26 309 aa13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 RPS11P62280 158 aaKnown RBP eCLIP13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 RPS25P62851 125 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 ACSM3Q53FZ2 586 aa13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 DMRTC1Q5HYR2 192 aa13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 TMEM42Q69YG0 159 aa13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 Q6ZS46 218 aa13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 UTS2BQ765I0 119 aa13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 LHFPL4Q7Z7J7 247 aa13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 PARP16Q8N5Y8 322 aa13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 OR14A2Q96R54 314 aa13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 MRPS26Q9BYN8 205 aaKnown RBP13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 WNT10AQ9GZT5 417 aa13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.28□□□□□ -0.28
SHKBP1-215ENST00000597649 TRBV23-1A0A0A0MS06 115 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 A0A1W2PPK0 400 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 FAM90A8PA6NJQ4 464 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 TMEM210A6NLX4 147 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 ZNF732B4DXR9 585 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 MAGEB3O15480 346 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 ATF1P18846 271 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 RAB3AP20336 220 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 PRKACBP22694 351 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 GPM6AP51674 278 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 FUT6P51993 359 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 PPP3R1P63098 170 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 GNG3P63215 75 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 SYT6Q5T7P8 510 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 TMEM200BQ69YZ2 307 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 LIAT1Q6ZQX7 453 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 CEACAM19Q7Z692 300 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 TMEM185AQ8NFB2 350 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 OR4F17Q8NGA8 305 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 OR13C9Q8NGT0 318 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 TRMT10AQ8TBZ6 339 aaKnown RBP13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 MUL1Q969V5 352 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 BORCS8Q96FH0 119 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 OR4F4Q96R69 305 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 NDUFB11Q9NX14 153 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 TAS2R4Q9NYW5 299 aa13.27□□□□□ -0.29
SHKBP1-215ENST00000597649 TRIM64CA6NLI5 447 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 VGLL3A8MV65 326 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 HCKP08631 526 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 GLRA1P23415 457 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 UBE2V2Q15819 145 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 SSX1Q16384 188 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 PLA1AQ53H76 456 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 LDLRAD2Q5SZI1 272 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 TMEM219Q86XT9 240 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 SDSLQ96GA7 329 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 OR51I2Q9H344 312 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 HEXA-AS1Q9H8Q6 139 aa13.26□□□□□ -0.29
SHKBP1-215ENST00000597649 A6NDX4 124 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 SULT1B1O43704 296 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 SMIM18P0DKX4 95 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 JUNBP17275 347 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 COX7A1P24310 79 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 AZGP1P25311 298 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 ATP1B3P54709 279 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 GP2P55259 537 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 KRTAP10-11P60412 298 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 ZNF573Q86YE8 665 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 CD177Q8N6Q3 437 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 DTX3Q8N9I9 347 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 SPSB1Q96BD6 273 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 DERL3Q96Q80 235 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 TCF19Q9Y242 345 aa13.25□□□□□ -0.29
SHKBP1-215ENST00000597649 TRBV5-7A0A0A0MS05 114 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 WI2-2373I1.2A0A1W2PRP0 233 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 GABRPO00591 440 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 ARL6IP5O75915 188 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 CCL3L1P16619 93 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 CD36P16671 472 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 RBP2P50120 134 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 MTCP1P56278 107 aa13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 RPL31P62899 125 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-215ENST00000597649 BLCAPP62952 87 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms