RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 RTN4RL2Q86UN3 420 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 SPACA3Q8IXA5 215 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 ZNF680Q8NEM1 530 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 KLF14Q8TD94 323 aaPredicted RBP8.87□□□□□ -0.99
VPS25-203ENST00000589520 CASTOR1Q8WTX7 329 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 TMEM230Q96A57 120 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 MUCL1Q96DR8 90 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 GALNT14Q96FL9 552 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 ABHD17AQ96GS6 310 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 SCNM1Q9BWG6 230 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 SUCNR1Q9BXA5 334 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 HEXA-AS1Q9H8Q6 139 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 ELOVL5Q9NYP7 299 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 UBQLN2Q9UHD9 624 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 PURGQ9UJV8 347 aaKnown RBP8.87□□□□□ -0.99
VPS25-203ENST00000589520 ATP23Q9Y6H3 246 aa8.87□□□□□ -0.99
VPS25-203ENST00000589520 IGKV1D-8A0A087WSZ0 117 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 TEX13DA0A0J9YY54 714 aaPredicted RBP8.86□□□□□ -0.99
VPS25-203ENST00000589520 A0A1B0GWJ7 208 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 C5orf51A6NDU8 294 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 CRYM-AS1A6NIL9 109 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 TRDCB7Z8K6 153 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 SH2D1BO14796 132 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 SYNGR1O43759 233 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 RP2O75695 350 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 WISP2O76076 250 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 IFNA21P01568 189 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 CELA3BP08861 270 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 CECR9P0C854 216 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 PET100P0DJ07 73 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 CXCL2P19875 107 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 GLRA1P23415 457 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 PSMB6P28072 239 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 FCGR2CP31995 323 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 KCNJ3P48549 501 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 HERV-K104P61576 105 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 RPS23P62266 143 aaKnown RBP8.86□□□□□ -0.99
VPS25-203ENST00000589520 SRPXP78539 464 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 SORDQ00796 357 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 RBPJQ06330 500 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 ZNF146Q15072 292 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 TBR1Q16650 682 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 DCAF12L2Q5VW00 463 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 TMUB2Q71RG4 321 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 ZNF546Q86UE3 836 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 SLC51BQ86UW2 128 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 SUMF2Q8NBJ7 301 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 SCCPDHQ8NBX0 429 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 BHLHE23Q8NDY6 225 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 NEK7Q8TDX7 302 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 MAFIPQ8WZ33 124 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 MOB3AQ96BX8 217 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 C2orf50Q96LR7 162 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 HDHD3Q9BSH5 251 aaPredicted RBP8.86□□□□□ -0.99
VPS25-203ENST00000589520 ADAT1Q9BUB4 502 aaKnown RBP8.86□□□□□ -0.99
VPS25-203ENST00000589520 MFFQ9GZY8 342 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 OPN3Q9H1Y3 402 aaPredicted RBP8.86□□□□□ -0.99
VPS25-203ENST00000589520 SEBOXQ9HB31 216 aaPredicted RBP8.86□□□□□ -0.99
VPS25-203ENST00000589520 ZNF629Q9UEG4 869 aaPredicted RBP8.86□□□□□ -0.99
VPS25-203ENST00000589520 TUBD1Q9UJT1 453 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 PCDHB10Q9UN67 800 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 FAM215AQ9Y5M1 114 aa8.86□□□□□ -0.99
VPS25-203ENST00000589520 FXYD6-FXYD2A0A087WZ82 144 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 TRBV6-7A0A0A0MS04 114 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 IGHV2OR16-5A0A0B4J2B6 119 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 IGHV1-18A0A0C4DH31 117 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 A0A1W2PR80 420 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 ARPC5O15511 151 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 B3GALNT1O75752 331 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 PGA5P0DJD9 388 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 RPS2P15880 293 aaKnown RBP8.85□□□□□ -0.99
VPS25-203ENST00000589520 S100GP29377 79 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 SERPINF1P36955 418 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 NUP62P37198 522 aaPredicted RBP8.85□□□□□ -0.99
VPS25-203ENST00000589520 RND3P61587 244 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 SUPT4H1P63272 117 aaKnown RBP8.85□□□□□ -0.99
VPS25-203ENST00000589520 SPATA46Q5T0L3 261 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 RGS7BPQ6MZT1 257 aaPredicted RBP8.85□□□□□ -0.99
VPS25-203ENST00000589520 ZNF880Q6PDB4 577 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 ACOT7LQ6ZUV0 252 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 LRTM2Q8N967 370 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 POC1AQ8NBT0 407 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 INO80EQ8NBZ0 244 aaPredicted RBP8.85□□□□□ -0.99
VPS25-203ENST00000589520 NAXEQ8NCW5 288 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 OR4A4PQ8NGN8 299 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 LILRB1Q8NHL6 650 aaPredicted RBP8.85□□□□□ -0.99
VPS25-203ENST00000589520 PPP1R1CQ8WVI7 109 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 WDR89Q96FK6 387 aaPredicted RBP8.85□□□□□ -0.99
VPS25-203ENST00000589520 NRIP2Q9BQI9 281 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 RSRP1Q9BUV0 290 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 DPCDQ9BVM2 203 aaPredicted RBP8.85□□□□□ -0.99
VPS25-203ENST00000589520 GSX2Q9BZM3 304 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 ARL6Q9H0F7 186 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 FXYD6Q9H0Q3 95 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 TLNRD1Q9H1K6 362 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 WDR13Q9H1Z4 485 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 OR51B6Q9H340 312 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 NAA60Q9H7X0 242 aa8.85□□□□□ -0.99
VPS25-203ENST00000589520 METTL8Q9H825 291 aaKnown RBP8.85□□□□□ -0.99
VPS25-203ENST00000589520 RASL12Q9NYN1 266 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms