RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PTGFRP43088 359 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 ARHGDIBP52566 201 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 NANOS3P60323 173 aaKnown RBP12.32□□□□□ -0.44
NME3-211ENST00000568561 CDC42P60953 191 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 ISL1P61371 349 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 CD69Q07108 199 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 EGFEM1PQ0D2K5 195 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 KPNB1Q14974 876 aaKnown RBP12.32□□□□□ -0.44
NME3-211ENST00000568561 ATP6AP1Q15904 470 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 LHFPL2Q6ZUX7 228 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 AMIGO2Q86SJ2 522 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 OSR2Q8N2R0 312 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 CCDC54Q8NEL0 328 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 OR13C9Q8NGT0 318 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 OR2G2Q8NGZ5 317 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 EME1Q96AY2 570 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 SLC7A6OSQ96CW6 309 aaPredicted RBP12.32□□□□□ -0.44
NME3-211ENST00000568561 RIBC2Q9H4K1 309 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 NEK6Q9HC98 313 aa12.32□□□□□ -0.44
NME3-211ENST00000568561 PSMB11A5LHX3 300 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 LY6LH3BQJ8 138 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 DUS4LO95620 317 aaKnown RBP12.31□□□□□ -0.44
NME3-211ENST00000568561 OCM2P0CE71 109 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 OCMP0CE72 109 aaPredicted RBP12.31□□□□□ -0.44
NME3-211ENST00000568561 PRKACBP22694 351 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 CEACAM3P40198 252 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 BNIP1Q12981 228 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 KRBOX4Q5JUW0 171 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 OR51A4Q8NGJ6 313 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 OR56B4Q8NH76 319 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 CORO2AQ92828 525 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 LEAP2Q969E1 77 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 C10orf35Q96D05 121 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 NOL4LQ96MY1 436 aaPredicted RBP12.31□□□□□ -0.44
NME3-211ENST00000568561 GABARAPL1Q9H0R8 117 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 TAS2R3Q9NYW6 316 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 LINC00527Q9UJ94 153 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 MOB4Q9Y3A3 225 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 HSPE1-MOB4S4R3N1 261 aa12.31□□□□□ -0.44
NME3-211ENST00000568561 SLC33A1O00400 549 aaPredicted RBP12.3□□□□□ -0.44
NME3-211ENST00000568561 HSPB6O14558 160 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 KDM4BO94953 1096 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 SNRNP70P08621 437 aaKnown RBP12.3□□□□□ -0.44
NME3-211ENST00000568561 GLP1RP43220 463 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 RPL23AP62750 156 aaKnown RBP12.3□□□□□ -0.44
NME3-211ENST00000568561 DIAPH2-AS1Q14236 149 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 ZSCAN26Q16670 478 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 C17orf58Q2M2W7 97 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 TMEM244Q5VVB8 128 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 Q6P435 159 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 C8orf86Q6ZUL3 223 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 UTS2BQ765I0 119 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 ZDHHC13Q8IUH4 622 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 OR4D6Q8NGJ1 314 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 DPF1Q92782 380 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 TOMM40LQ969M1 308 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 SPSB1Q96BD6 273 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 KIRREL1Q96J84 757 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 COMMD4Q9H0A8 199 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 FRRS1LQ9P0K9 344 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 STAB2Q8WWQ8 2551 aa12.3□□□□□ -0.44
NME3-211ENST00000568561 FUOMA2VDF0 154 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 NUDT19A8MXV4 375 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 E9PQ18 207 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 LMO1P25800 156 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 MNDAP41218 407 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 PRRX1P54821 245 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 LTC4SQ16873 150 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 CCDC144NLQ6NUI1 221 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 OR2W3Q7Z3T1 314 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 RPEQ96AT9 228 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 DUX3Q96PT4 197 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 MBOAT4Q96T53 435 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 B9D2Q9BPU9 175 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 PCDHGB5Q9Y5G0 923 aa12.29□□□□□ -0.44
NME3-211ENST00000568561 A0A087X0M5 115 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 A0A1B0GX30 115 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 ZNF729A6NN14 1252 aaPredicted RBP12.28□□□□□ -0.44
NME3-211ENST00000568561 M0QZK8 103 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 ATP5HO75947 161 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 FAM106CPP0CH98 169 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 FASP25445 335 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 THBS3P49746 956 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 HES1Q14469 280 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 HNF4GQ14541 408 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 CDK5R1Q15078 307 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 DRAM1Q8N682 238 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 KLHL30-AS1Q8NEE0 82 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 OR8J1Q8NGP2 316 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 OR13A1Q8NGR1 328 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 OR13C3Q8NGS6 347 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 OR9G1Q8NH87 305 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 CREB3L1Q96BA8 519 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 GABARAPL3Q9BY60 117 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 ENOPH1Q9UHY7 261 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 KIF25Q9UIL4 384 aa12.28□□□□□ -0.44
NME3-211ENST00000568561 A0A1W2PPI3 338 aa12.27□□□□□ -0.45
NME3-211ENST00000568561 DEGS1O15121 323 aa12.27□□□□□ -0.45
NME3-211ENST00000568561 ISG15P05161 165 aa12.27□□□□□ -0.45
NME3-211ENST00000568561 CSN2P05814 226 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms