RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 COLCA2A8K830 154 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 SOX15O60248 233 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 FCGR3AP08637 254 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 CATR1Q13166 79 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 SMAD4Q13485 552 aaKnown RBP9.21□□□□□ -0.94
USB1-212ENST00000566082 CXorf66Q5JRM2 361 aaPredicted RBP9.21□□□□□ -0.94
USB1-212ENST00000566082 ABHD17BQ5VST6 288 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 RABEPKQ7Z6M1 372 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 TMEM252Q8N6L7 170 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 TMEM230Q96A57 120 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 ADGRG7Q96K78 797 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 ZNF385AQ96PM9 386 aaKnown RBP9.21□□□□□ -0.94
USB1-212ENST00000566082 FOXB1Q99853 325 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 GPR87Q9BY21 358 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 SLC25A22Q9H936 323 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 CCL28Q9NRJ3 127 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 SLC7A10Q9NS82 523 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 COA4Q9NYJ1 87 aa9.21□□□□□ -0.94
USB1-212ENST00000566082 CRYM-AS1A6NIL9 109 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 TERTO14746 1132 aaKnown RBP9.2□□□□□ -0.94
USB1-212ENST00000566082 KRASP01116 189 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 CHRNA7P36544 502 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 RPL29P47914 159 aaKnown RBP9.2□□□□□ -0.94
USB1-212ENST00000566082 RND3P61587 244 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 IGLV3-21P80748 117 aaPredicted RBP9.2□□□□□ -0.94
USB1-212ENST00000566082 ENDOGQ14249 297 aaKnown RBP9.2□□□□□ -0.94
USB1-212ENST00000566082 DMBX1Q8NFW5 382 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 TMEM100Q9NV29 134 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 KIAA1456Q9P272 454 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 GRPP07492 148 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 CCL2P13500 99 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 VDAC1P21796 283 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 CSRP2Q16527 193 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 TMEM241Q24JQ0 296 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 NAT6Q93015 286 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 OBP2BQ9NPH6 170 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 LHX6Q9UPM6 363 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 STARD10Q9Y365 291 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 HELZP42694 1942 aaKnown RBP9.2□□□□□ -0.94
USB1-212ENST00000566082 CXorf65A6NEN9 183 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 RNF212BA8MTL3 300 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 PIAS2O75928 621 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 CDS2O95674 445 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 PTBP3O95758 552 aaKnown RBP9.2□□□□□ -0.94
USB1-212ENST00000566082 GALR1P47211 349 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 ERVK-16P61578 105 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 ZP4Q12836 540 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 RAB35Q15286 201 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 VASH2Q86V25 355 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 HEYLQ9NQ87 328 aaPredicted RBP9.2□□□□□ -0.94
USB1-212ENST00000566082 CYTL1Q9NRR1 136 aa9.2□□□□□ -0.94
USB1-212ENST00000566082 ANAPC1Q9H1A4 1944 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 ELOA3CA0A087WX78 387 aaPredicted RBP9.19□□□□□ -0.94
USB1-212ENST00000566082 C17orf112F2Z3M2 114 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 ZNHIT1O43257 154 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 CDX1P47902 265 aaPredicted RBP9.19□□□□□ -0.94
USB1-212ENST00000566082 LSM6P62312 80 aaKnown RBP9.19□□□□□ -0.94
USB1-212ENST00000566082 OR10P1Q8NGE3 313 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 THOC3Q96J01 351 aaKnown RBP9.19□□□□□ -0.94
USB1-212ENST00000566082 ESPL1Q14674 2120 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 ZNF737O75373 536 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 IGKV3-11P04433 115 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 HEXAP06865 529 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 ZXDAP98168 799 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 CLN3Q13286 438 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 BTNL8Q6UX41 500 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 LRP11Q86VZ4 500 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 ZDHHC23Q8IYP9 409 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 ZNF784Q8NCA9 323 aaPredicted RBP9.19□□□□□ -0.94
USB1-212ENST00000566082 RASL10BQ96S79 203 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 RYDENQ9NUL5 291 aaKnown RBP9.19□□□□□ -0.94
USB1-212ENST00000566082 TRAV39A0A0B4J263 110 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 A0A1B0GV90 55 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 A0A1W2PPE3 182 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 OPN1MWP04001 364 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 OPN1MW2P0DN77 364 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 OPN1MW3P0DN78 364 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 KITLGP21583 273 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 LBX1P52954 281 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 SSTP61278 116 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 IL24Q13007 206 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 RAB31Q13636 194 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 AGBL5Q8NDL9 886 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 OR10A7Q8NGE5 316 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 RSG1Q9BU20 258 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 ACTR3CQ9C0K3 210 aaPredicted RBP9.19□□□□□ -0.94
USB1-212ENST00000566082 ZNF665Q9H7R5 613 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 DMRT1Q9Y5R6 373 aa9.19□□□□□ -0.94
USB1-212ENST00000566082 PHF3Q92576 2039 aaKnown RBP9.19□□□□□ -0.94
USB1-212ENST00000566082 DNAJC13O75165 2243 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 PGA4P0DJD7 388 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 PGA5P0DJD9 388 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 DTYMKP23919 212 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 GABRA2P47869 451 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 BSXQ3C1V8 233 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 TMEM164Q5U3C3 297 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 FAM166AQ6J272 317 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 ZNF600Q6ZNG1 722 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 ATP5SQ99766 215 aa9.18□□□□□ -0.94
USB1-212ENST00000566082 DUSP23Q9BVJ7 150 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms