RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TNFRSF13CQ96RJ3 184 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 MAP3K3Q99759 626 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 PRRT1Q99946 306 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 TEP1Q99973 2627 aaKnown RBP3.5□□□□□ -1.85
LINC00561-201ENST00000565815 TMEM138Q9NPI0 162 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 GSN-AS1Q9NRJ2 163 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 GPR132Q9UNW8 380 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 KCNK6Q9Y257 313 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 CCDC88CQ9P219 2028 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 FRYLO94915 3013 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 FXYD6-FXYD2A0A087WZ82 144 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 TRAV24A0A0B4J272 114 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 A0A0B4J2A0 478 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 A0A1B0GTI1 187 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 C2orf74A8MZ97 194 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 C4orf51C9J302 202 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 NPIPB9F8W1W9 429 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 H7C2Y5 167 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 SLC17A2O00624 439 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 ARPC5O15511 151 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 KLF7O75840 302 aaPredicted RBP3.5□□□□□ -1.85
LINC00561-201ENST00000565815 RENP00797 406 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 CD74P04233 296 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 CD14P08571 375 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 C8orf89P0DMQ9 161 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 HIST1H1CP16403 213 aaKnown RBP3.5□□□□□ -1.85
LINC00561-201ENST00000565815 CNR1P21554 472 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 ACAA2P42765 397 aaKnown RBP3.5□□□□□ -1.85
LINC00561-201ENST00000565815 STARP49675 285 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 TNFSF10P50591 281 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 MADCAM1Q13477 382 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 LTB4RQ15722 352 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 MICBQ29980 383 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 HES5Q5TA89 166 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 OR5M10Q6IEU7 315 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 C5orf46Q6UWT4 87 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 IL34Q6ZMJ4 242 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 SSX6Q7RTT6 188 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 NOTCH2NLQ7Z3S9 236 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 CDC20BQ86Y33 519 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 SPAG16Q8N0X2 631 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 C2orf73Q8N5S3 287 aaPredicted RBP3.5□□□□□ -1.85
LINC00561-201ENST00000565815 BEST4Q8NFU0 473 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 OR4C16Q8NGL9 310 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 COQ8AQ8NI60 647 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 LCN9Q8WX39 176 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 MCHR2Q969V1 340 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 MARC2Q969Z3 335 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 RERGQ96A58 199 aaPredicted RBP3.5□□□□□ -1.85
LINC00561-201ENST00000565815 ZMYND19Q96E35 227 aaPredicted RBP3.5□□□□□ -1.85
LINC00561-201ENST00000565815 MRPS24Q96EL2 167 aaKnown RBP3.5□□□□□ -1.85
LINC00561-201ENST00000565815 ALG12Q9BV10 488 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 FXYD6Q9H0Q3 95 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 WDR76Q9H967 626 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 HRASLS2Q9NWW9 162 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 CKLFQ9UBR5 152 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 SHPKQ9UHJ6 478 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 FBXL4Q9UKA2 621 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 ERVK-19Q9WJR5 959 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 MRPS33Q9Y291 106 aaKnown RBP3.5□□□□□ -1.85
LINC00561-201ENST00000565815 IER3IP1Q9Y5U9 82 aa3.5□□□□□ -1.85
LINC00561-201ENST00000565815 F8P00451 2351 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 TRAV27A0A087WT01 109 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 A0A0G2JN53 185 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 TMEM150CB9EJG8 249 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 DNASE2O00115 360 aaPredicted RBP3.49□□□□□ -1.85
LINC00561-201ENST00000565815 GOSR2O14653 212 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 EIF4E2O60573 245 aaKnown RBP3.49□□□□□ -1.85
LINC00561-201ENST00000565815 UPK3AO75631 287 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 CTAG2O75638 210 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 SCO1O75880 301 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 CD2P06729 351 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 ZNF35P13682 527 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 ABOP16442 354 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 FUT1P19526 365 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 PEBP1P30086 187 aaKnown RBP3.49□□□□□ -1.85
LINC00561-201ENST00000565815 RPL4P36578 427 aaKnown RBP3.49□□□□□ -1.85
LINC00561-201ENST00000565815 SLC6A8P48029 635 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 IGLV3-21P80748 117 aaPredicted RBP3.49□□□□□ -1.85
LINC00561-201ENST00000565815 HMGN3Q15651 99 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 C3AR1Q16581 482 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 ACTBL2Q562R1 376 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 PAN3Q58A45 887 aaKnown RBP3.49□□□□□ -1.85
LINC00561-201ENST00000565815 C10orf91Q5T1B1 145 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 LINC01590Q5TEZ4 76 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 EIF5AL1Q6IS14 154 aaKnown RBP3.49□□□□□ -1.85
LINC00561-201ENST00000565815 STEAP1BQ6NZ63 245 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 C11orf88Q6PI97 169 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 SLC25A47Q6Q0C1 308 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 Q6ZRP5 223 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 CPEB2Q7Z5Q1 589 aaKnown RBP3.49□□□□□ -1.85
LINC00561-201ENST00000565815 MEX3DQ86XN8 651 aaKnown RBP3.49□□□□□ -1.85
LINC00561-201ENST00000565815 METTL27Q8N6F8 245 aaPredicted RBP3.49□□□□□ -1.85
LINC00561-201ENST00000565815 OR1J4Q8NGS1 313 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 OR51A7Q8NH64 312 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 SCGB3A2Q96PL1 93 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 OR2A5Q96R48 311 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 CHIAQ9BZP6 476 aa3.49□□□□□ -1.85
LINC00561-201ENST00000565815 NKX6-2Q9C056 277 aaPredicted RBP3.49□□□□□ -1.85
LINC00561-201ENST00000565815 EXO5Q9H790 373 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms