RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 PLEKHA8P1O95397 391 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 MAGEA1P43355 309 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 CLDN18P56856 261 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 DNAJC3Q13217 504 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 GPR176Q14439 515 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 MMDQ15546 238 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 Q499Y3 187 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 TPRG1LQ5T0D9 272 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 C16orf87Q6PH81 154 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 NT5CQ8TCD5 201 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 SPACA4Q8TDM5 124 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 QKIQ96PU8 341 aaKnown RBP eCLIP0.12□□□□□ -2.39
CASC4-211ENST00000561305 OR2M4Q96R27 311 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 GPR22Q99680 433 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 VPS37BQ9H9H4 285 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 MRPS30Q9NP92 439 aaKnown RBP0.12□□□□□ -2.39
CASC4-211ENST00000561305 ZC4H2Q9NQZ6 224 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 RBM12B-AS1Q9P1G2 102 aa0.12□□□□□ -2.39
CASC4-211ENST00000561305 DIDO1Q9BTC0 2240 aaKnown RBP0.11□□□□□ -2.39
CASC4-211ENST00000561305 SBNO1A3KN83 1393 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 IGKV2-40A0A087WW87 121 aaPredicted RBP0.11□□□□□ -2.39
CASC4-211ENST00000561305 ARRDC5A6NEK1 342 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 UPK2O00526 184 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 IGKV2D-40P01614 121 aaPredicted RBP0.11□□□□□ -2.39
CASC4-211ENST00000561305 ZNF705DP0CH99 300 aaPredicted RBP0.11□□□□□ -2.39
CASC4-211ENST00000561305 ZNF705BP0CI00 300 aaPredicted RBP0.11□□□□□ -2.39
CASC4-211ENST00000561305 HCCSP53701 268 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 LAIR2Q6ISS4 152 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 ERICH5Q6P6B1 374 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 EPGNQ6UW88 154 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 GALNT10Q86SR1 603 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 SETD3Q86TU7 594 aaPredicted RBP0.11□□□□□ -2.39
CASC4-211ENST00000561305 INO80EQ8NBZ0 244 aaPredicted RBP0.11□□□□□ -2.39
CASC4-211ENST00000561305 CA5BP1Q8WTZ4 195 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 TMIGD2Q96BF3 282 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 C20orf144Q9BQM9 153 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 SHCBP1LQ9BZQ2 653 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 C6orf50Q9HD87 102 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 SDHAF3Q9NRP4 125 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 BABAM2Q9NXR7 383 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 PRO2289Q9P1D8 64 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 TBC1D24Q9ULP9 559 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 TMCC3Q9ULS5 477 aa0.11□□□□□ -2.39
CASC4-211ENST00000561305 ZNF638Q14966 1978 aaKnown RBP0.1□□□□□ -2.39
CASC4-211ENST00000561305 FAM240AA0A1B0GVK7 77 aa0.1□□□□□ -2.39
CASC4-211ENST00000561305 IGSF23A1L1A6 192 aa0.1□□□□□ -2.39
CASC4-211ENST00000561305 ZNF99A8MXY4 864 aaPredicted RBP0.1□□□□□ -2.39
CASC4-211ENST00000561305 EVI2BP34910 448 aa0.1□□□□□ -2.39
CASC4-211ENST00000561305 MLF1P58340 268 aa0.1□□□□□ -2.39
CASC4-211ENST00000561305 APOFQ13790 326 aa0.1□□□□□ -2.39
CASC4-211ENST00000561305 WDR43Q15061 677 aaKnown RBP eCLIP0.1□□□□□ -2.39
CASC4-211ENST00000561305 TPGS1Q6ZTW0 290 aa0.1□□□□□ -2.39
CASC4-211ENST00000561305 BZW1Q7L1Q6 419 aaKnown RBP0.1□□□□□ -2.39
CASC4-211ENST00000561305 EIF3MQ7L2H7 374 aaKnown RBP0.1□□□□□ -2.39
CASC4-211ENST00000561305 TCP10LQ8TDR4 215 aa0.1□□□□□ -2.39
CASC4-211ENST00000561305 CPB2Q96IY4 423 aa0.1□□□□□ -2.39
CASC4-211ENST00000561305 OLFM3Q96PB7 478 aa0.1□□□□□ -2.39
CASC4-211ENST00000561305 BTRCQ9Y297 605 aa0.1□□□□□ -2.39
CASC4-211ENST00000561305 ATRNO75882 1429 aa0.1□□□□□ -2.39
CASC4-211ENST00000561305 TCAPO15273 167 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 RLN2P04090 185 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 OR5AL1P0C617 328 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 CECR9P0C854 216 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 CD36P16671 472 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 S100A2P29034 98 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 XKP51811 444 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 HTR4Q13639 388 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 IDI1Q13907 227 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 OR8G1Q15617 311 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 IDNKQ5T6J7 187 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 OR6K3Q8NGY3 331 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 ERMNQ8TAM6 284 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 CD200R1Q8TD46 325 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 C22orf15Q8WYQ4 148 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 CCDC77Q9BR77 488 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 ANAPC13Q9BS18 74 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 TIMM21Q9BVV7 248 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 ULBP1Q9BZM6 244 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 FAM192AQ9GZU8 254 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 XKR8Q9H6D3 395 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 LYRM4Q9HD34 91 aa0.09□□□□□ -2.4
CASC4-211ENST00000561305 TECTAO75443 2155 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 A8MWP6 167 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 HCRTO43612 131 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 HSBP1O75506 76 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 RALBP11234 206 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 FAM229BQ4G0N7 80 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 UNQ6190/PRO20217Q6UXQ8 127 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 SDIM1Q6ZPB5 146 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 KRTCAP2Q8N6L1 136 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 KCTD4Q8WVF5 259 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 TWIST2Q8WVJ9 160 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 ISOC2Q96AB3 205 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 COA1Q9GZY4 146 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 VCX3AQ9NNX9 186 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 KCNIP2Q9NS61 270 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 DDX18Q9NVP1 670 aaKnown RBP0.08□□□□□ -2.4
CASC4-211ENST00000561305 DDIT4Q9NX09 232 aa0.08□□□□□ -2.4
CASC4-211ENST00000561305 PEF1Q9UBV8 284 aaKnown RBP0.08□□□□□ -2.4
CASC4-211ENST00000561305 CFL2Q9Y281 166 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms