RNA–Protein interactions for RNA: ENST00000560171.5

DCAF11-228, Transcript of DDB1 and CUL4 associated factor 11, humanhuman

TSL 3

Gene DCAF11, Length 590 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF11-228ENST00000560171 PAN3Q58A45 887 aaKnown RBP13.5□□□□□ -0.25
DCAF11-228ENST00000560171 UBE2UQ5VVX9 321 aa13.5□□□□□ -0.25
DCAF11-228ENST00000560171 SIGLECL1Q8N7X8 197 aa13.5□□□□□ -0.25
DCAF11-228ENST00000560171 Q8NFD4 153 aa13.5□□□□□ -0.25
DCAF11-228ENST00000560171 MRPS24Q96EL2 167 aaKnown RBP13.5□□□□□ -0.25
DCAF11-228ENST00000560171 ING3Q9NXR8 418 aa13.5□□□□□ -0.25
DCAF11-228ENST00000560171 GHRLQ9UBU3 117 aa13.5□□□□□ -0.25
DCAF11-228ENST00000560171 SF3B6Q9Y3B4 125 aaKnown RBP13.5□□□□□ -0.25
DCAF11-228ENST00000560171 ATRQ13535 2644 aa13.5□□□□□ -0.25
DCAF11-228ENST00000560171 RNF212BA8MTL3 300 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 SLC33A1O00400 549 aaPredicted RBP13.49□□□□□ -0.25
DCAF11-228ENST00000560171 CCRL2O00421 344 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 CRTAPO75718 401 aaPredicted RBP13.49□□□□□ -0.25
DCAF11-228ENST00000560171 OR7C1O76099 320 aaPredicted RBP13.49□□□□□ -0.25
DCAF11-228ENST00000560171 ZNF728P0DKX0 622 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 CALRP27797 417 aaKnown RBP13.49□□□□□ -0.25
DCAF11-228ENST00000560171 ERP29P30040 261 aaKnown RBP13.49□□□□□ -0.25
DCAF11-228ENST00000560171 RANBP1P43487 201 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 OR3A1P47881 315 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 GP2P55259 537 aaKnown RBP13.49□□□□□ -0.25
DCAF11-228ENST00000560171 BAMBIQ13145 260 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 KCTD21Q4G0X4 260 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 KRBOX4Q5JUW0 171 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 ATAD3CQ5T2N8 411 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 C9orf139Q6ZV77 190 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 LRRTM1Q86UE6 522 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 OR4D6Q8NGJ1 314 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 PPIL3Q9H2H8 161 aaKnown RBP13.49□□□□□ -0.25
DCAF11-228ENST00000560171 PPA2Q9H2U2 334 aa13.49□□□□□ -0.25
DCAF11-228ENST00000560171 TRGV10A0A0A0MS01 117 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 A0A1W2PRD5 423 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 A0A1W2PRF3 423 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 A0A1W2PRM7 423 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 MEX3AA1L020 520 aaKnown RBP13.48□□□□□ -0.25
DCAF11-228ENST00000560171 H3BUI4 141 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 TRIM77I1YAP6 450 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 HSPB6O14558 160 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 SC5DO75845 299 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 UBBP0CG47 229 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 CCL3L1P16619 93 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 UBE2E1P51965 193 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 P2RX3P56373 397 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 RBM11P57052 281 aaKnown RBP13.48□□□□□ -0.25
DCAF11-228ENST00000560171 ERVFRD-1P60508 538 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 PRB3Q04118 309 aaPredicted RBP13.48□□□□□ -0.25
DCAF11-228ENST00000560171 RUSC1-AS1Q66K80 236 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 LINC00596Q86U02 117 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 TPRX1Q8N7U7 411 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 ZNF565Q8N9K5 539 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 ZNF714Q96N38 554 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 SELENOIQ9C0D9 397 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 PLGRKTQ9HBL7 147 aa13.48□□□□□ -0.25
DCAF11-228ENST00000560171 SOX21Q9Y651 276 aaPredicted RBP13.48□□□□□ -0.25
DCAF11-228ENST00000560171 PDCD5O14737 125 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 GEMIN2O14893 280 aaKnown RBP13.47□□□□□ -0.25
DCAF11-228ENST00000560171 VENTXO95231 258 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 HTR2CP28335 458 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 GLIPR1P48060 266 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 LGALS4P56470 323 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 HILS1P60008 231 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 SRSF2Q01130 221 aaKnown RBP13.47□□□□□ -0.25
DCAF11-228ENST00000560171 ZNF273Q14593 569 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 SSX1Q16384 188 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 TAF9Q16594 264 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 MPV17LQ2QL34 196 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 NHLRC3Q5JS37 347 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 C1orf100Q5SVJ3 147 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 METAP1DQ6UB28 335 aaPredicted RBP13.47□□□□□ -0.25
DCAF11-228ENST00000560171 NEK7Q8TDX7 302 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 DPCDQ9BVM2 203 aaPredicted RBP13.47□□□□□ -0.25
DCAF11-228ENST00000560171 CST11Q9H112 138 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 BANF2Q9H503 90 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 UNKLQ9H9P5 680 aaKnown RBP13.47□□□□□ -0.25
DCAF11-228ENST00000560171 SPACA1Q9HBV2 294 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 VCX3AQ9NNX9 186 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 NDUFB11Q9NX14 153 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 UBE2J1Q9Y385 318 aaPredicted RBP13.47□□□□□ -0.25
DCAF11-228ENST00000560171 AK6Q9Y3D8 172 aaKnown RBP13.47□□□□□ -0.25
DCAF11-228ENST00000560171 LINC00312Q9Y6C7 94 aa13.47□□□□□ -0.25
DCAF11-228ENST00000560171 TRAV24A0A0B4J272 114 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 TRDV1A0A1B0GX56 115 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 MEIOCA2RUB1 952 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 MCRIP1C9JLW8 97 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 RNASEK-C17orf49H0YIS7 233 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 NPFFO15130 113 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 TNFAIP8O95379 198 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 PAHP00439 452 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 CSN2P05814 226 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 MYL9P24844 172 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 KCNJ3P48549 501 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 DLX1P56177 255 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 ATXN7L3Q14CW9 347 aaPredicted RBP13.46□□□□□ -0.25
DCAF11-228ENST00000560171 DEFB112Q30KQ8 113 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 SUMF2Q8NBJ7 301 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 TSPAN14Q8NG11 270 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 GAL3ST2Q9H3Q3 398 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 OR6C3Q9NZP0 311 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 SSR3Q9UNL2 185 aa13.46□□□□□ -0.25
DCAF11-228ENST00000560171 A0A087WXM4 84 aa13.45□□□□□ -0.26
DCAF11-228ENST00000560171 MEIKINA0A087WXM9 373 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms