RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 JMJD1CQ15652 2540 aa8.76□□□□□ -1.01
TPM1-212ENST00000558347 CHD3Q12873 2000 aaKnown RBP8.76□□□□□ -1.01
TPM1-212ENST00000558347 TRAV14DV4A0A0A6YYC5 116 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 TMEM14DPA8MWL7 114 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 KIAA1324LA8MWY0 1029 aaPredicted RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 VWC2LB2RUY7 222 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 M0QYG6 137 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 M0R135 149 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 GSTP1P09211 210 aaKnown RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 CCL1P22362 96 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 ZBTB25P24278 435 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 HTR5AP47898 357 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 CX3CR1P49238 355 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 PDLIM4P50479 330 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 PRKXP51817 358 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 ZNF121P58317 390 aaPredicted RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 TAS2R31P59538 309 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 DHRS2Q13268 280 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 TMEM249Q2WGJ8 235 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 ZNF660Q6AZW8 331 aaPredicted RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 TRAPPC6BQ86SZ2 158 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 KCNRGQ8N5I3 272 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 CPEB3Q8NE35 698 aaKnown RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 AKR7LQ8NHP1 331 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 PHYHIPLQ96FC7 376 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 WDR89Q96FK6 387 aaPredicted RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 ZNF799Q96GE5 643 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 SLC6A7Q99884 636 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 MRPL37Q9BZE1 423 aaKnown RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 SPEF1Q9Y4P9 236 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 FBN1P35555 2871 aaKnown RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 LOC105371267A0A1B0GV96 52 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 TMEM235A6NFC5 223 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 CRLF1O75462 422 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 IGLV3-1P01715 115 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 SERPINA5P05154 406 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 FGF2P09038 288 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 CCL2P13500 99 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 ZNF20P17024 532 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 NAT1P18440 290 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 NUP62P37198 522 aaPredicted RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 TAGLNQ01995 201 aaKnown RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 PNLIPRP3Q17RR3 467 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 MOGAT2Q3SYC2 334 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 CDNFQ49AH0 187 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 TMED4Q7Z7H5 227 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 ZNF546Q86UE3 836 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 PAQR4Q8N4S7 273 aaPredicted RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 CCDC54Q8NEL0 328 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 OR1J2Q8NGS2 313 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 OR10R2Q8NGX6 335 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 MITD1Q8WV92 249 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 MRPL24Q96A35 216 aaKnown RBP8.75□□□□□ -1.01
TPM1-212ENST00000558347 DNTTIP1Q9H147 329 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 IFT46Q9NQC8 304 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 YAE1D1Q9NRH1 226 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 COMMD9Q9P000 198 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 FZR1Q9UM11 496 aa8.75□□□□□ -1.01
TPM1-212ENST00000558347 A0A0U1RQV5 110 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 OR5H14A6NHG9 310 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 F5H5K5 113 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 LMX1BO60663 402 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 DBHP09172 617 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 VSIG8P0DPA2 414 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 GLRXP35754 106 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 GNALP38405 381 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 CBX5P45973 191 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 PLP2Q04941 152 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 UNC119Q13432 240 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 C11orf87Q6NUJ2 197 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 COLCA1Q6ZS62 124 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 Q6ZSR3 168 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 LRP11Q86VZ4 500 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 OR8B12Q8NGG6 310 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 OR52N4Q8NGI2 321 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 OR52H1Q8NGJ2 320 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 COQ8AQ8NI60 647 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 ADAT3Q96EY9 351 aaPredicted RBP8.74□□□□□ -1.01
TPM1-212ENST00000558347 PHB2Q99623 299 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 SYT3Q9BQG1 590 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 PIMREGQ9BSJ6 248 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 RAB1BQ9H0U4 201 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 MYEF2Q9P2K5 600 aaKnown RBP8.74□□□□□ -1.01
TPM1-212ENST00000558347 TNFSF18Q9UNG2 199 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 VSIG4Q9Y279 399 aa8.74□□□□□ -1.01
TPM1-212ENST00000558347 NOP16Q9Y3C1 178 aaKnown RBP8.74□□□□□ -1.01
TPM1-212ENST00000558347 LOC100509620A0A075B734 347 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 A0A0B4J2A0 478 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 IGHV4-61A0A0C4DH41 118 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 KANTRA0A1W2PQU2 76 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 C9orf170A2RU37 121 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 VSTM5A8MXK1 200 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 NDUFS8O00217 210 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 BCL2L11O43521 198 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 DUS4LO95620 317 aaKnown RBP8.73□□□□□ -1.01
TPM1-212ENST00000558347 HLA-AP01891 365 aaKnown RBP8.73□□□□□ -1.01
TPM1-212ENST00000558347 IGHV4-31P0DP07 118 aa8.73□□□□□ -1.01
TPM1-212ENST00000558347 USF1P22415 310 aaPredicted RBP8.73□□□□□ -1.01
TPM1-212ENST00000558347 ZNF93P35789 620 aaPredicted RBP8.73□□□□□ -1.01
TPM1-212ENST00000558347 SCGB2B2Q4G0G5 96 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms