RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TMEM164Q5U3C3 297 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 SYT3Q9BQG1 590 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 NAA60Q9H7X0 242 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 SPACA1Q9HBV2 294 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 GHRLQ9UBU3 117 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 BOKQ9UMX3 212 aaPredicted RBP11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 MED12LQ86YW9 2145 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 LOC102723996A0A087X1L8 192 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 OR6C6A6NF89 314 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 ARGFXA6NJG6 315 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 SIRPB1O00241 398 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 TFF1P04155 84 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 TK1P04183 234 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 CHATP28329 748 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 RUNX1Q01196 453 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 CXorf66Q5JRM2 361 aaPredicted RBP11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 LHFPL2Q6ZUX7 228 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 PHYHIPLQ96FC7 376 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 RGCCQ9H4X1 137 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 URGCP-MRPS24S4R325 110 aa11.8□□□□□ -0.52
PRPF40B-209ENST00000548825 ZNF503-AS2A6NEH8 195 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 PDCD6O75340 191 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 GRPP07492 148 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 FUT3P21217 361 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 IDH3GP51553 393 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 OR2B8PP59922 312 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 PEA15Q15121 130 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 KCNMB1Q16558 191 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 HAGHQ16775 308 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 GAPTQ8N292 157 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 ABHD14AQ9BUJ0 271 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 STRADBQ9C0K7 418 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 CCL28Q9NRJ3 127 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 PRSS50Q9UI38 385 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 PPP1R3CQ9UQK1 317 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 ABCA1O95477 2261 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 ETV2O00321 342 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 ADAM20O43506 726 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 RBMXL2O75526 392 aaKnown RBP11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 PPYP01298 95 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 STK11Q15831 433 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 CNEP1R1Q8N9A8 125 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 SLC30A7Q8NEW0 376 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 APH1AQ96BI3 265 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 RNF150Q9ULK6 438 aa11.79□□□□□ -0.52
PRPF40B-209ENST00000548825 BORCS7-ASMTA0A0B4J1R7 106 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 ST8SIA3O43173 380 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 IGHV3-13P01766 116 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 IGHV3-7P01780 117 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 CTSDP07339 412 aaPredicted RBP11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 CRYGSP22914 178 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 FKBP2P26885 142 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 FUT6P51993 359 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 B3GALT5-AS1P59052 145 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 PCBD1P61457 104 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 MKXQ8IYA7 352 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 SUCNR1Q9BXA5 334 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 WDR1O75083 606 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 SNAPINO95295 136 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 EIF5AP63241 154 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 ZFP36L1Q07352 338 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 TBC1D26Q86UD7 250 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 GLYATL2Q8WU03 294 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 PSMF1Q92530 271 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 NRIP2Q9BQI9 281 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 FANCFQ9NPI8 374 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 MED9Q9NWA0 146 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 B4GALT7Q9UBV7 327 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 COL4A2P08572 1712 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 CRYM-AS1A6NIL9 109 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 S100A6P06703 90 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 CST2P09228 141 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 HLA-GP17693 338 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 F2RL1P55085 397 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 ARL6IP1Q15041 203 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 LGI3Q8N145 548 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 ASB13Q8WXK3 278 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 CPNE4Q96A23 557 aaPredicted RBP11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 KIRREL1Q96J84 757 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 MMP26Q9NRE1 261 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 UFSP2Q9NUQ7 469 aa11.78□□□□□ -0.52
PRPF40B-209ENST00000548825 ADGRG4Q8IZF6 3080 aa11.77□□□□□ -0.52
PRPF40B-209ENST00000548825 A6NLC8 198 aa11.77□□□□□ -0.52
PRPF40B-209ENST00000548825 TERTO14746 1132 aaKnown RBP11.77□□□□□ -0.52
PRPF40B-209ENST00000548825 RHBDL1O75783 438 aa11.77□□□□□ -0.52
PRPF40B-209ENST00000548825 FAM157CP0CG43 387 aa11.77□□□□□ -0.52
PRPF40B-209ENST00000548825 IAPPP10997 89 aa11.77□□□□□ -0.52
PRPF40B-209ENST00000548825 CD37P11049 281 aa11.77□□□□□ -0.52
PRPF40B-209ENST00000548825 RBM11P57052 281 aaKnown RBP11.77□□□□□ -0.52
PRPF40B-209ENST00000548825 ADAM5Q6NVV9 412 aa11.77□□□□□ -0.52
PRPF40B-209ENST00000548825 DHRS11Q6UWP2 260 aa11.77□□□□□ -0.52
PRPF40B-209ENST00000548825 NUFIP2Q7Z417 695 aaKnown RBP11.77□□□□□ -0.52
PRPF40B-209ENST00000548825 MED13LQ71F56 2210 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 APC2O95996 2303 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 hCG_38984A0A1B0GV85 526 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 LNP1A1A4G5 178 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 DEDDO75618 318 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 LYZL6O75951 148 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 TNFSF15O95150 251 aa11.77□□□□□ -0.53
PRPF40B-209ENST00000548825 SPP1P10451 314 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms