RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 LINC00518Q8N0U6 118 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 SPAG16Q8N0X2 631 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 SVBPQ8N300 66 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 DTX3Q8N9I9 347 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 NPEPL1Q8NDH3 523 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 OR4K13Q8NH42 304 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 OR1S1Q8NH92 325 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 WFDC12Q8WWY7 111 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 ST8SIA2Q92186 375 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 GTF3AQ92664 365 aaKnown RBP5.01□□□□□ -1.61
CPSF7-219ENST00000539952 MARC2Q969Z3 335 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 SLC25A38Q96DW6 304 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 FAM71F1Q96KD3 344 aaPredicted RBP5.01□□□□□ -1.61
CPSF7-219ENST00000539952 SCGB3A2Q96PL1 93 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 FOXB1Q99853 325 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 ALG12Q9BV10 488 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 NKX6-2Q9C056 277 aaPredicted RBP5.01□□□□□ -1.61
CPSF7-219ENST00000539952 AUNIPQ9H7T9 357 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 PATZ1Q9HBE1 687 aaKnown RBP5.01□□□□□ -1.61
CPSF7-219ENST00000539952 CDH20Q9HBT6 801 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 BIN3Q9NQY0 253 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 MMP26Q9NRE1 261 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 TAS2R3Q9NYW6 316 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 KLK11Q9UBX7 282 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 ZDHHC8Q9ULC8 765 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 FLVCR2Q9UPI3 526 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 RYR3Q15413 4870 aa5.01□□□□□ -1.61
CPSF7-219ENST00000539952 TRRAPQ9Y4A5 3859 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 TRAV27A0A087WT01 109 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 FXYD6-FXYD2A0A087WZ82 144 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 A0A1W2PPK0 400 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 PQLC2LA1A4F0 135 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 METTL21EPA6NDL7 271 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 GGT3PA6NGU5 568 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 MCIDASD6RGH6 385 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 MS4A18H0YCH9 400 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 BLOC1S5-TXNDC5H3BN57 136 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 SLC17A2O00624 439 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 GOSR2O14653 212 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 PIN1P1O15428 100 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 MAGEB4O15481 346 aaPredicted RBP5□□□□□ -1.61
CPSF7-219ENST00000539952 BCL2L11O43521 198 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 SELENOFO60613 162 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 SNAPINO95295 136 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 FARS2O95363 451 aaKnown RBP5□□□□□ -1.61
CPSF7-219ENST00000539952 BPNT1O95861 308 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 GPANK1O95872 356 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 IFNA4P05014 189 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 ADH4P08319 380 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 CD14P08571 375 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 OR4E1P0C645 316 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 CD37P11049 281 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 GTF2F2P13984 249 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 SELEP16581 610 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 ANXA7P20073 488 aaKnown RBP5□□□□□ -1.61
CPSF7-219ENST00000539952 TBPP20226 339 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 SDHAP31040 664 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 SLC6A9P48067 706 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 TAS2R31P59538 309 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 UBE2MP61081 183 aaKnown RBP5□□□□□ -1.61
CPSF7-219ENST00000539952 PLP2Q04941 152 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 EGR4Q05215 589 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 DBPQ10586 325 aaPredicted RBP5□□□□□ -1.61
CPSF7-219ENST00000539952 RAB11BQ15907 218 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 MICBQ29980 383 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 TBC1D28Q2M2D7 210 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 MS4A18Q3C1V0 323 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 ZNF718Q3SXZ3 478 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 TMEM155Q4W5P6 130 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 C4orf46Q504U0 113 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 RNASE12Q5GAN4 147 aaKnown RBP5□□□□□ -1.61
CPSF7-219ENST00000539952 NKAPLQ5M9Q1 402 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 PHYHD1Q5SRE7 291 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 EIF5AL1Q6IS14 154 aaKnown RBP5□□□□□ -1.61
CPSF7-219ENST00000539952 ALKAL2Q6UX46 152 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 BTNL3Q6UXE8 466 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 CFAP77Q6ZQR2 320 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 RHOUQ7L0Q8 258 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 SSX6Q7RTT6 188 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 HMGN2P46Q86SG4 172 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 LRRTM1Q86UE6 522 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 SKA3Q8IX90 412 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 IZUMO1Q8IYV9 350 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 TMEM123Q8N131 208 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 TMEM86BQ8N661 226 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 ZNF676Q8N7Q3 588 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 CYB561A3Q8NBI2 242 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 INO80EQ8NBZ0 244 aaPredicted RBP5□□□□□ -1.61
CPSF7-219ENST00000539952 ADPRHL1Q8NDY3 354 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 SLC30A7Q8NEW0 376 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 SDR9C7Q8NEX9 313 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 OR52H1Q8NGJ2 320 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 OR4C16Q8NGL9 310 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 OR10K1Q8NGX5 313 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 OR6S1Q8NH40 331 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 THAP6Q8TBB0 222 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 GPX8Q8TED1 209 aa5□□□□□ -1.61
CPSF7-219ENST00000539952 KTI12Q96EK9 354 aaPredicted RBP5□□□□□ -1.61
CPSF7-219ENST00000539952 MRPS24Q96EL2 167 aaKnown RBP5□□□□□ -1.61
CPSF7-219ENST00000539952 PRRT1Q99946 306 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms