RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 DMTNQ08495 405 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 SYCP1Q15431 976 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 TRIP13Q15645 432 aaPredicted RBP2.14□□□□□ -2.07
PRKDC-205ENST00000535375 KRTAP6-3Q3LI67 103 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 ACTBL2Q562R1 376 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 TMEM215Q68D42 235 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 LAMTOR1Q6IAA8 161 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 FA2HQ7L5A8 372 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 GALNT10Q86SR1 603 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 LRRC6Q86X45 466 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 ZNF738Q8NE65 137 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 ITLN2Q8WWU7 325 aaPredicted RBP2.14□□□□□ -2.07
PRKDC-205ENST00000535375 PITX2Q99697 317 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 CD300AQ9UGN4 299 aa2.14□□□□□ -2.07
PRKDC-205ENST00000535375 SVILO95425 2214 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 SCN4AP35499 1836 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 A0A1B0GTI1 187 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 ERICH2A1L162 156 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 GOLGA6L4A6NEF3 574 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 M0QXV9 152 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 PDCD6O75340 191 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 ACOT2P49753 483 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 BNIP2Q12982 314 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 TMEM249Q2WGJ8 235 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 OR10J3Q5JRS4 329 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 FAM183BPQ6ZVS7 135 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 DAZ4Q86SG3 579 aaKnown RBP2.13□□□□□ -2.07
PRKDC-205ENST00000535375 LINC00596Q86U02 117 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 SGPP2Q8IWX5 399 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 ZIC4Q8N9L1 334 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 OR2M3Q8NG83 312 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 ACTL9Q8TC94 416 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 FAM45AQ8TCE6 357 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 PPP1R36Q96LQ0 422 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 YPEL4Q96NS1 127 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 SRRQ9GZT4 340 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 RHOFQ9HBH0 211 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 DAZ1Q9NQZ3 744 aaKnown RBP2.13□□□□□ -2.07
PRKDC-205ENST00000535375 SLC22A14Q9Y267 594 aa2.13□□□□□ -2.07
PRKDC-205ENST00000535375 EIF4G1Q04637 1599 aaKnown RBP2.13□□□□□ -2.07
PRKDC-205ENST00000535375 SETD1AO15047 1707 aaKnown RBP2.13□□□□□ -2.07
PRKDC-205ENST00000535375 J3QRE1 110 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 FABP7O15540 132 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 TCF21O43680 179 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 COX7A2P2O60397 106 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 CNMDO75829 334 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 IGLV7-43P04211 117 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 SLC2A1P11166 492 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 SYT1P21579 422 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 CNTFRP26992 372 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 ELK4P28324 431 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 PLTPP55058 493 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 FLOT2Q14254 428 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 ANGPT1Q15389 498 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 RBM48Q5RL73 367 aaKnown RBP2.12□□□□□ -2.07
PRKDC-205ENST00000535375 TMEM69Q5SWH9 247 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 FAM162BQ5T6X4 162 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 ZNF773Q6PK81 442 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 COMTD1Q86VU5 262 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 PHOSPHO2Q8TCD6 241 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 IFT81Q8WYA0 676 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 YIPF5Q969M3 257 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 MED10Q9BTT4 135 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 ZNF706Q9Y5V0 76 aaPredicted RBP2.12□□□□□ -2.07
PRKDC-205ENST00000535375 SLC22A7Q9Y694 548 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 URGCP-MRPS24S4R325 110 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 ABCB11O95342 1321 aa2.12□□□□□ -2.07
PRKDC-205ENST00000535375 IGHV3-43A0A0B4J1X8 118 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 TMEM213A2RRL7 107 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 KCNK2O95069 426 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 KLHL2O95198 593 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 CXorf1O96002 111 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 PRTN3P24158 256 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 KDELR2P33947 212 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 UGT2B10P36537 528 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 CCL23P55773 120 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 HBG1P69891 147 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 HBG2P69892 147 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 PRDX1Q06830 199 aaKnown RBP2.11□□□□□ -2.07
PRKDC-205ENST00000535375 PMS2P3Q13401 168 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 RAB31Q13636 194 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 IHHQ14623 411 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 UBE2NLQ5JXB2 153 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 TIMM23BQ5SRD1 257 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 HCP5Q6MZN7 132 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 ERICH5Q6P6B1 374 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 FAM131AQ6UXB0 335 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 ADM2Q7Z4H4 148 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 SLC25A45Q8N413 288 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 OR2K2Q8NGT1 345 aa2.11□□□□□ -2.07
PRKDC-205ENST00000535375 PDCD6IPQ8WUM4 868 aaKnown RBP2.11□□□□□ -2.07
PRKDC-205ENST00000535375 TRNT1Q96Q11 434 aaKnown RBP2.11□□□□□ -2.07
PRKDC-205ENST00000535375 CHMP4BQ9H444 224 aaKnown RBP2.11□□□□□ -2.07
PRKDC-205ENST00000535375 LRPPRCP42704 1394 aaKnown RBP2.1□□□□□ -2.07
PRKDC-205ENST00000535375 ATRNO75882 1429 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 TRAV8-3A0A0A6YYJ7 113 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 IGHV2-26A0A0B4J1V2 119 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 GOLGA8IPA6NC78 632 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 FAM183AA6NL82 134 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 TRPC5OSA6NMA1 111 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms