RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TGM4P49221 684 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 RAB8AP61006 207 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 RHOAP61586 193 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 TPM4P67936 248 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 COTL1Q14019 142 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZNF773Q6PK81 442 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 C16orf47Q6ZP98 133 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 PLEKHG7Q6ZR37 379 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 LFNGQ8NES3 379 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 PEBP4Q96S96 227 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 FAAP24Q9BTP7 215 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 C1orf50Q9BV19 199 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 TAS2R13Q9NYV9 303 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 ATP6V1DQ9Y5K8 247 aa3.14□□□□□ -1.91
HMGB1P47-201ENST00000511281 MIA3Q5JRA6 1907 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 BAZ2AQ9UIF9 1905 aaKnown RBP3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 CC2D2AQ9P2K1 1620 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 TRAV8-3A0A0A6YYJ7 113 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 IZUMO1RA6ND01 250 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 GOLGA6L4A6NEF3 574 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 PRAMEF26H0Y7S4 382 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 SLC31A1O15431 190 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 CYTH3O43739 400 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 ORM1P02763 201 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 IGKV3-11P04433 115 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 TPM3P06753 285 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 OR5AC1P0C628 307 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 SEC11BP0C7V7 166 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 SLC6A1P30531 599 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 IDH2P48735 452 aaKnown RBP3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 FAM3AP98173 230 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZNHIT3Q15649 155 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 DGAT2L6Q6ZPD8 337 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 FA2HQ7L5A8 372 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 NEGR1Q7Z3B1 354 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 OR5L1Q8NGL2 311 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 OR6K3Q8NGY3 331 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 LINC00477Q96M19 166 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZNF426Q9BUY5 554 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 SLC25A31Q9H0C2 315 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 TMEM38BQ9NVV0 291 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 COMMD9Q9P000 198 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 HMGXB4Q9UGU5 601 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 PSMD13Q9UNM6 376 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 CECR2Q9BXF3 1484 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 DCAF1Q9Y4B6 1507 aa3.13□□□□□ -1.91
HMGB1P47-201ENST00000511281 RAB3GAP2Q9H2M9 1393 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 IGHV2-26A0A0B4J1V2 119 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 TRAV8-2A0A0B4J237 113 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 C1orf232A0A0U1RR37 186 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 GOLGA6L10A6NI86 522 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 KLRC4-KLRK1H3BQV0 150 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 RPL36A-HNRNPH2H7BZ11 118 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 ENTPD6O75354 484 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 EPPINO95925 133 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 CNTFRP26992 372 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 NUDT2P50583 147 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 RPL14P50914 215 aaKnown RBP3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 DLX6P56179 175 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 GOLGA7BQ2TAP0 167 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 FAM45BPQ6NSW5 357 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 FAM9CQ8IZT9 166 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZNF709Q8N972 641 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 OR2M3Q8NG83 312 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 CASTOR1Q8WTX7 329 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 DEDD2Q8WXF8 326 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 YIPF5Q969M3 257 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 PPP1R36Q96LQ0 422 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 TMEM56Q96MV1 263 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 OLFM3Q96PB7 478 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 TAPBPLQ9BX59 468 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZNF780BQ9Y6R6 833 aa3.12□□□□□ -1.91
HMGB1P47-201ENST00000511281 ATRNO75882 1429 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 TRIP11Q15643 1979 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 CEACAM18A8MTB9 384 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 C16orf90A8MZG2 172 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 F5H5K5 113 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 PSIP1O75475 530 aaKnown RBP3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 SOD3P08294 240 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 EXOC3L4Q17RC7 722 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 SLC25A34Q6PIV7 304 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 MUC15Q8N387 334 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZFP62Q8NB50 900 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 MNS1Q8NEH6 495 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 ARL5BQ96KC2 179 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 PRSS27Q9BQR3 290 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 C7orf50Q9BRJ6 194 aaKnown RBP3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 EBPLQ9BY08 206 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 PARVGQ9HBI0 331 aa3.11□□□□□ -1.91
HMGB1P47-201ENST00000511281 YEATS2Q9ULM3 1422 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 RPRD2Q5VT52 1461 aaKnown RBP3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 C8orf87E5RJ46 101 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 H3BP45 60 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 CDRT1O95170 752 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 CXorf1O96002 111 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 PRB2P02812 416 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 SCGB1C2P0DMR2 95 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 CD40LGP29965 261 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 TGFBR1P36897 503 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms