RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 OR2D2Q9H210 308 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 TRDCB7Z8K6 153 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 VSIG8P0DPA2 414 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 VDAC1P21796 283 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 CDC34P49427 236 aaPredicted RBP14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 Q3ZCU0 254 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 TBC1D26Q86UD7 250 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 OR2M3Q8NG83 312 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 PRSS27Q9BQR3 290 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 PRDM6Q9NQX0 595 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 RNF24Q9Y225 148 aa14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 YTHDF2Q9Y5A9 579 aaKnown RBP14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 SIRT4Q9Y6E7 314 aaPredicted RBP14.22□□□□□ -0.13
HMGXB3-202ENST00000503427 ETV3LQ6ZN32 361 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 CCL3P10147 92 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 ZNF345Q14585 488 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 OR10G4Q8NGN3 311 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 OR10G9Q8NGN4 311 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 OR10G7Q8NGN6 311 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 PLPPR2Q96GM1 343 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 TRAF4Q9BUZ4 470 aaPredicted RBP14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 GPR27Q9NS67 375 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 CSRP3P50461 194 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 SLC26A10Q8NG04 563 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 DNASE2BQ8WZ79 361 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 SCARF2Q96GP6 870 aaPredicted RBP14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 LRFN3Q9BTN0 628 aa14.21□□□□□ -0.13
HMGXB3-202ENST00000503427 SOX8P57073 446 aa14.21□□□□□ -0.14
HMGXB3-202ENST00000503427 ZNRF4Q8WWF5 429 aa14.21□□□□□ -0.14
HMGXB3-202ENST00000503427 ELF5Q9UKW6 265 aaPredicted RBP14.21□□□□□ -0.14
HMGXB3-202ENST00000503427 IGF2P01344 180 aa14.21□□□□□ -0.14
HMGXB3-202ENST00000503427 DCAF10Q5QP82 559 aa14.21□□□□□ -0.14
HMGXB3-202ENST00000503427 ATP5SQ99766 215 aa14.21□□□□□ -0.14
HMGXB3-202ENST00000503427 VAMP8Q9BV40 100 aa14.21□□□□□ -0.14
HMGXB3-202ENST00000503427 MED19A0JLT2 244 aaPredicted RBP14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 SLC31A2O15432 143 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 SYNGR2O43760 224 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 DYNLT3P51808 116 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 RHOBP62745 196 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 LYG1Q8N1E2 194 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 CENPVL1A0A0U1RR11 272 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 DEFB108AA8MXU0 73 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 OPN1MWP04001 364 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 OPN1MW2P0DN77 364 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 OPN1MW3P0DN78 364 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 LIFP15018 202 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 ZNF83P51522 516 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 AWAT1Q58HT5 328 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 FKBP11Q9NYL4 201 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 PRR13Q9NZ81 148 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 ZMIZ1Q9ULJ6 1067 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 DTX4Q9Y2E6 619 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 TMIGD3P0DMS9 266 aaPredicted RBP14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 OR3A1P47881 315 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 LIMS1P48059 325 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 TMEM108Q6UXF1 575 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 MYOZ1Q9NP98 299 aaPredicted RBP14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 CCL2P13500 99 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 MEOX2P50222 304 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 OR5I1Q13606 314 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 SLC25A22Q9H936 323 aa14.2□□□□□ -0.14
HMGXB3-202ENST00000503427 AP4M1O00189 453 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 GEMIN2O14893 280 aaKnown RBP14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 GCM2O75603 506 aaPredicted RBP14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 ANKRD34CP0C6C1 535 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 BMP5P22003 454 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 NANOS3P60323 173 aaKnown RBP14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 PAX5Q02548 391 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 FOXO1Q12778 655 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 TSPO2Q5TGU0 170 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 MYPOPQ86VE0 399 aaPredicted RBP14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 OR5D13Q8NGL4 314 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 FBXO17Q96EF6 278 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 ESRP2Q9H6T0 727 aaKnown RBP14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 PPYP01298 95 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 EFNB2P52799 333 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 A0A1W2PR80 420 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 GFRA3O60609 400 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 MMP7P09237 267 aaPredicted RBP14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 HLA-GP17693 338 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 OR2T6Q8NHC8 308 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 LRRC29Q8WV35 223 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 GHITMQ9H3K2 345 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 NAT8BQ9UHF3 227 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 DSPPQ9NZW4 1301 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 CDS2O95674 445 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 ETFRF1Q6IPR1 90 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 SLC25A45Q8N413 288 aa14.19□□□□□ -0.14
HMGXB3-202ENST00000503427 TRAV20A0A0B4J274 112 aa14.18□□□□□ -0.14
HMGXB3-202ENST00000503427 MAGEA5P43359 124 aa14.18□□□□□ -0.14
HMGXB3-202ENST00000503427 TOMM20LQ6UXN7 152 aa14.18□□□□□ -0.14
HMGXB3-202ENST00000503427 MRPL24Q96A35 216 aaKnown RBP14.18□□□□□ -0.14
HMGXB3-202ENST00000503427 NOL4LQ96MY1 436 aaPredicted RBP14.18□□□□□ -0.14
HMGXB3-202ENST00000503427 CXXC4Q9H2H0 198 aa14.18□□□□□ -0.14
HMGXB3-202ENST00000503427 PARD6AQ9NPB6 346 aa14.18□□□□□ -0.14
HMGXB3-202ENST00000503427 SLC2A9Q9NRM0 540 aa14.18□□□□□ -0.14
HMGXB3-202ENST00000503427 NAT8Q9UHE5 227 aa14.18□□□□□ -0.14
HMGXB3-202ENST00000503427 UNC13CQ8NB66 2214 aa14.18□□□□□ -0.14
HMGXB3-202ENST00000503427 DUXBA0A1W2PPF3 345 aa14.18□□□□□ -0.14
HMGXB3-202ENST00000503427 LYZL6O75951 148 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms