RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 DAZAP2Q15038 168 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-214ENST00000495485 NKPD1Q17RQ9 610 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 MICBQ29980 383 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 PIGYQ3MUY2 71 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 OR52W1Q6IF63 320 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 LPCAT3Q6P1A2 487 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 PEG10Q86TG7 708 aaKnown RBP8.73□□□□□ -1.01
HDAC3-214ENST00000495485 NOXA1Q86UR1 476 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 MYPOPQ86VE0 399 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-214ENST00000495485 SCCPDHQ8NBX0 429 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 ZNF431Q8TF32 576 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-214ENST00000495485 RADILQ96JH8 1075 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 HYLS1Q96M11 299 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 DIRC2Q96SL1 478 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 CLEC4MQ9H2X3 399 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-214ENST00000495485 RANGRFQ9HD47 186 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-214ENST00000495485 RASL12Q9NYN1 266 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 MTCH1Q9NZJ7 389 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 AK3Q9UIJ7 227 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 ANXA10Q9UJ72 324 aa8.73□□□□□ -1.01
HDAC3-214ENST00000495485 C14orf166Q9Y224 244 aaKnown RBP8.73□□□□□ -1.01
HDAC3-214ENST00000495485 MAP1AP78559 2803 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-214ENST00000495485 ARID1AO14497 2285 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 GRPP07492 148 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 FCGR3AP08637 254 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 OR4E1P0C645 316 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 ANXA7P20073 488 aaKnown RBP8.72□□□□□ -1.01
HDAC3-214ENST00000495485 C4BPBP20851 252 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 FPR2P25090 351 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 CALCRP30988 508 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 MPV17P39210 176 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 NPBWR2P48146 333 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 ERVS71-1P61550 626 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 FAM27E3Q08E93 113 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 FCN2Q15485 313 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 CDSNQ15517 529 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 MPPED2Q15777 294 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 SIGIRRQ6IA17 410 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 ALKBH2Q6NS38 261 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 Q6ZS49 121 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 OVCH2Q7RTZ1 564 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 SLC36A1Q7Z2H8 476 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 TMED4Q7Z7H5 227 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 SLC25A42Q86VD7 318 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 C12orf45Q8N5I9 185 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-214ENST00000495485 NUP37Q8NFH4 326 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 PHB2Q99623 299 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 SULT4A1Q9BR01 284 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 BEX2Q9BXY8 128 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 BEX1Q9HBH7 125 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 TREM2Q9NZC2 230 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 ZDHHC8Q9ULC8 765 aa8.72□□□□□ -1.01
HDAC3-214ENST00000495485 HRNRQ86YZ3 2850 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-214ENST00000495485 POLQO75417 2590 aa8.71□□□□□ -1.01
HDAC3-214ENST00000495485 TEX15Q9BXT5 2789 aa8.71□□□□□ -1.01
HDAC3-214ENST00000495485 MEIKINA0A087WXM9 373 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 PIGBOS1A0A0B4J2F0 54 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 A1L4Q6 167 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 A6NLC8 198 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 CEACAM18A8MTB9 384 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 CDIPTO14735 213 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 SYNGR1O43759 233 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 DIRAS3O95661 229 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 PGA5P0DJD9 388 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 PGAM2P15259 253 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 ZNF44P15621 663 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 CD40P25942 277 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 CD200P41217 278 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 KCNJ3P48549 501 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 GMFBP60983 142 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 RAP2BP61225 183 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 IL13RA1P78552 427 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 ZNF154Q13106 437 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 TMEM128Q5BJH2 165 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 MOB1BQ7L9L4 216 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 FAM90A1Q86YD7 464 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 POC1AQ8NBT0 407 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 TMEM185AQ8NFB2 350 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 OR10Z1Q8NGY1 313 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 PPP1R35Q8TAP8 253 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 VRK1Q99986 396 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-214ENST00000495485 SEC22CQ9BRL7 303 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 ZNF436Q9C0F3 470 aaPredicted RBP8.71□□□□□ -1.02
HDAC3-214ENST00000495485 ESRP2Q9H6T0 727 aaKnown RBP8.71□□□□□ -1.02
HDAC3-214ENST00000495485 RCC2Q9P258 522 aaKnown RBP8.71□□□□□ -1.02
HDAC3-214ENST00000495485 MGAT4CQ9UBM8 478 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 DUSP13Q9UII6 198 aa8.71□□□□□ -1.02
HDAC3-214ENST00000495485 TRBV6-6A0A0A6YYG2 114 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 A0A1B0GWJ7 208 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 IFNL4K9M1U5 179 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 SLC22A5O76082 557 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 RGS11O94810 467 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 HLA-AP01891 365 aaKnown RBP8.7□□□□□ -1.02
HDAC3-214ENST00000495485 GIPP09681 153 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-214ENST00000495485 OR5H8P0DN80 308 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 CD34P28906 385 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 S100GP29377 79 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 ERVK11-1P61568 191 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 HERV-K104P61576 105 aa8.7□□□□□ -1.02
HDAC3-214ENST00000495485 NKX6-1P78426 367 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms