RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 AHDC1Q5TGY3 1603 aaPredicted RBP1.44□□□□□ -2.18
LMNB1-207ENST00000494185 BRCA1P38398 1863 aaKnown RBP1.43□□□□□ -2.18
LMNB1-207ENST00000494185 TRAV8-2A0A0B4J237 113 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 TRAV40A0A0B4J280 105 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 IGHV1-3A0A0C4DH29 117 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 LOC105371267A0A1B0GV96 52 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 C5orf63A6NC05 138 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 FAM183AA6NL82 134 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 A8MWL6 223 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 CCRL2O00421 344 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 GPR171O14626 319 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 RBFOX2O43251 390 aaKnown RBP eCLIP1.43□□□□□ -2.18
LMNB1-207ENST00000494185 SCO1O75880 301 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 DHRS3O75911 302 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 SOX14O95416 240 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 PSMG1O95456 288 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 EPPINO95925 133 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 IGLV3-25P01717 112 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 IGKV5-2P06315 115 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 SERPINA6P08185 405 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 IL1RNP18510 177 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 PRTN3P24158 256 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 COILP38432 576 aaPredicted RBP1.43□□□□□ -2.18
LMNB1-207ENST00000494185 CD79BP40259 229 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 KRTAP10-8P60410 259 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 POLR2GP62487 172 aaKnown RBP eCLIP1.43□□□□□ -2.18
LMNB1-207ENST00000494185 BASP1P80723 227 aaKnown RBP1.43□□□□□ -2.18
LMNB1-207ENST00000494185 MEF2CQ06413 473 aaPredicted RBP1.43□□□□□ -2.18
LMNB1-207ENST00000494185 ACTBL2Q562R1 376 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 COQ5Q5HYK3 327 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 SAXO2Q658L1 398 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 TMEM215Q68D42 235 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 DNM1P34Q6PK57 102 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 DCXRQ7Z4W1 244 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 PRNTQ86SH4 94 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 GALNT10Q86SR1 603 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 BLIDQ8IZY5 108 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 ORMDL3Q8N138 153 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 MUC15Q8N387 334 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 Q8N402 240 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 RNF182Q8N6D2 247 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 CYB561D1Q8N8Q1 229 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 OR5T1Q8NG75 326 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 OR10G2Q8NGC3 310 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 OR8A1Q8NGG7 326 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 OR4P4Q8NGL7 312 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 OR9A2Q8NGT5 310 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 OR5H2Q8NGV7 314 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 OR52N1Q8NH53 320 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 CDC26Q8NHZ8 85 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 LINC01560Q8TB33 94 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 CIRBP-AS1Q8TBR5 109 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 FAM57AQ8TBR7 257 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 CASTOR1Q8WTX7 329 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 C22orf15Q8WYQ4 148 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 SMIM19Q96E16 107 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 SMIM12Q96EX1 92 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 FMC1Q96HJ9 113 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 MBOAT7Q96N66 472 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 YPEL4Q96NS1 127 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 TAPBPLQ9BX59 468 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 EBPLQ9BY08 206 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 PLA2G2FQ9BZM2 168 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 SLC25A31Q9H0C2 315 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 TAS2R13Q9NYV9 303 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 ENOPH1Q9UHY7 261 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 FARSAQ9Y285 508 aaKnown RBP1.43□□□□□ -2.18
LMNB1-207ENST00000494185 RAB3GAP2Q9H2M9 1393 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 PLB1Q6P1J6 1458 aa1.43□□□□□ -2.18
LMNB1-207ENST00000494185 ADAMTSL3P82987 1691 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 NOS1P29475 1434 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 IGLV2-18A0A075B6J9 118 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 IGKV1D-17A0A075B6S4 117 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 LOC102724200A0A096LPH7 203 aaPredicted RBP1.42□□□□□ -2.18
LMNB1-207ENST00000494185 TRAV8-3A0A0A6YYJ7 113 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 IGHV2-26A0A0B4J1V2 119 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 GMNCA6NCL1 334 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 SMIM23A6NLE4 172 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 EFCAB9A8MZ26 197 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 TMEM250H0YL14 139 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 BIRC5O15392 142 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 TCF21O43680 179 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 COX7A2P2O60397 106 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 CTDNEP1O95476 244 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 CCNE2O96020 404 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 CYB5R3P00387 301 aaPredicted RBP1.42□□□□□ -2.18
LMNB1-207ENST00000494185 APOEP02649 317 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 COX5BP10606 129 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 CELP19835 753 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 MPIP34949 423 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 ACOT2P49753 483 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 TAS2R43P59537 309 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 GTF2BQ00403 316 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 DR1Q01658 176 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 ATP5G2Q06055 141 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 FAM53BQ14153 422 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 GNA13Q14344 377 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 PAFAH1B3Q15102 231 aaKnown RBP1.42□□□□□ -2.18
LMNB1-207ENST00000494185 ELOCQ15369 112 aa1.42□□□□□ -2.18
LMNB1-207ENST00000494185 SSX1Q16384 188 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms