RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 FAM76BQ5HYJ3 339 aa11.97□□□□□ -0.49
USP11-207ENST00000478596 FAM201AQ5SY85 155 aa11.97□□□□□ -0.49
USP11-207ENST00000478596 SFRP4Q6FHJ7 346 aaPredicted RBP11.97□□□□□ -0.49
USP11-207ENST00000478596 CROCCP3Q8IVE0 287 aa11.97□□□□□ -0.49
USP11-207ENST00000478596 MUC20Q8N307 709 aaPredicted RBP11.97□□□□□ -0.49
USP11-207ENST00000478596 TMEM86BQ8N661 226 aa11.97□□□□□ -0.49
USP11-207ENST00000478596 FAM46BQ96A09 425 aa11.97□□□□□ -0.49
USP11-207ENST00000478596 C12orf43Q96C57 262 aaKnown RBP11.97□□□□□ -0.49
USP11-207ENST00000478596 GFI1Q99684 422 aa11.97□□□□□ -0.49
USP11-207ENST00000478596 CHIAQ9BZP6 476 aa11.97□□□□□ -0.49
USP11-207ENST00000478596 AURKAIP1Q9NWT8 199 aaPredicted RBP11.97□□□□□ -0.49
USP11-207ENST00000478596 GLS2Q9UI32 602 aa11.97□□□□□ -0.49
USP11-207ENST00000478596 CEPT1Q9Y6K0 416 aa11.97□□□□□ -0.49
USP11-207ENST00000478596 ARHGAP32A7KAX9 2087 aa11.97□□□□□ -0.49
USP11-207ENST00000478596 TRAV38-1A0A0B4J264 116 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 DPPA5A6NC42 116 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 OOEPA6NGQ2 149 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 LGALS8O00214 317 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 ZNF780AO75290 641 aaPredicted RBP11.96□□□□□ -0.49
USP11-207ENST00000478596 MPIG6BO95866 241 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 SLC2A2P11168 524 aaPredicted RBP11.96□□□□□ -0.49
USP11-207ENST00000478596 PMELP40967 661 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 GABRA2P47869 451 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 BMXP51813 675 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 HOXA4Q00056 320 aaPredicted RBP11.96□□□□□ -0.49
USP11-207ENST00000478596 PAX8Q06710 450 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 SPCS2Q15005 226 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 DGUOKQ16854 277 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 FAM58AQ8N1B3 248 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 GCSAMQ8N6F7 178 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 PXT1Q8NFP0 134 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 TBC1D15Q8TC07 691 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 AP3S1Q92572 193 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 NRIP2Q9BQI9 281 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 DCUN1D5Q9BTE7 237 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 TMEM59Q9BXS4 323 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 KCNK15Q9H427 330 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 LIN7BQ9HAP6 207 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 NLKQ9UBE8 527 aa11.96□□□□□ -0.49
USP11-207ENST00000478596 DNAH9Q9NYC9 4486 aa11.96□□□□□ -0.5
USP11-207ENST00000478596 DYNC2H1Q8NCM8 4307 aaKnown RBP11.95□□□□□ -0.5
USP11-207ENST00000478596 GTF2F2P13984 249 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 RPS19P39019 145 aaKnown RBP11.95□□□□□ -0.5
USP11-207ENST00000478596 MDH2P40926 338 aaKnown RBP11.95□□□□□ -0.5
USP11-207ENST00000478596 NPBWR2P48146 333 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 RORCP51449 518 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 SCN1BQ07699 218 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 IKZF1Q13422 519 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 DEFB112Q30KQ8 113 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 C1orf100Q5SVJ3 147 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 ACP7Q6ZNF0 438 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 C11orf53Q8IXP5 236 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 OSR2Q8N2R0 312 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 SPICQ8N5J4 248 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 OR51D1Q8NGF3 324 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 LGALS14Q8TCE9 139 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 ZDHHC16Q969W1 377 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 SLC25A46Q96AG3 418 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 FAM3DQ96BQ1 224 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 WDR13Q9H1Z4 485 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 BANF2Q9H503 90 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 BATF3Q9NR55 127 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 RASL12Q9NYN1 266 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 MTCH1Q9NZJ7 389 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 GHRLQ9UBU3 117 aa11.95□□□□□ -0.5
USP11-207ENST00000478596 IGHV3OR16-10A0A075B7F0 116 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 A0A0B4J203 849 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 IGKV1-12A0A0C4DH73 117 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 IGKV1D-12P01611 117 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 GYPAP02724 150 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 SNRPBP14678 240 aaKnown RBP11.94□□□□□ -0.5
USP11-207ENST00000478596 ZNF44P15621 663 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 RPS2P15880 293 aaKnown RBP11.94□□□□□ -0.5
USP11-207ENST00000478596 MGMTP16455 207 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 GABRR1P24046 479 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 ZMYND11Q15326 602 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 CCBE1Q6UXH8 406 aaPredicted RBP11.94□□□□□ -0.5
USP11-207ENST00000478596 Q6YL49 198 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 NLRC3Q7RTR2 1065 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 NR2C2APQ86WQ0 139 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 ASCC1Q8N9N2 400 aaKnown RBP11.94□□□□□ -0.5
USP11-207ENST00000478596 OR5T2Q8NGG2 359 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 KCNG3Q8TAE7 436 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 PHF21AQ96BD5 680 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 UPRTQ96BW1 309 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 SEH1LQ96EE3 360 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 SELENOIQ9C0D9 397 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 RBM38Q9H0Z9 239 aaKnown RBP11.94□□□□□ -0.5
USP11-207ENST00000478596 RHOFQ9HBH0 211 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 TNFRSF19Q9NS68 423 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 IL36GQ9NZH8 169 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 POMT1Q9Y6A1 747 aa11.94□□□□□ -0.5
USP11-207ENST00000478596 OR2AT4A6NND4 320 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 A8MXK9 166 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 ZNF701M0R085 212 aaPredicted RBP11.93□□□□□ -0.5
USP11-207ENST00000478596 ADAM20O43506 726 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 IGHV2-70P01814 119 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 SFTPBP07988 381 aa11.93□□□□□ -0.5
USP11-207ENST00000478596 MUC1P15941 1255 aaPredicted RBP11.93□□□□□ -0.5
USP11-207ENST00000478596 DUSP1P28562 367 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms