RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 INSP01308 110 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 TNNC2P02585 160 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 ISG15P05161 165 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 CTXN2P0C2S0 81 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 P0C879 139 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 CD99P14209 185 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 SPNP16150 400 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 CRISP2P16562 243 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 TCN2P20062 427 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 DTYMKP23919 212 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 HSD11B1P28845 292 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 ADORA1P30542 326 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 CXCL5P42830 114 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 LGALS7P47929 136 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 NMUP48645 174 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 GDI2P50395 445 aaKnown RBP3.02□□□□□ -1.93
VPS13D-207ENST00000476169 SLC18A1P54219 525 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 GLO1Q04760 184 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 AESQ08117 197 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 SMAGPQ0VAQ4 97 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 CDC20Q12834 499 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 TMED2Q15363 201 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 C4orf26Q17RF5 130 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 CLEC12BQ2HXU8 276 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 SPIN4Q56A73 249 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 LAMTOR1Q6IAA8 161 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 LRRN1Q6UXK5 716 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 DGAT2L6Q6ZPD8 337 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 GTSCR1Q86UQ5 136 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 CEND1Q8N111 149 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 ZCCHC24Q8N2G6 241 aaKnown RBP3.02□□□□□ -1.93
VPS13D-207ENST00000476169 ABHD3Q8WU67 409 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 RAB8BQ92930 207 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 FMC1Q96HJ9 113 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 C1orf147Q96MC9 270 aaPredicted RBP3.02□□□□□ -1.93
VPS13D-207ENST00000476169 MBOAT7Q96N66 472 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 OR2M2Q96R28 347 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 MRPL20Q9BYC9 149 aaKnown RBP3.02□□□□□ -1.93
VPS13D-207ENST00000476169 LINC00597Q9H2U6 94 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 MAP1LC3AQ9H492 121 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 SLC2A9Q9NRM0 540 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 DMAC2Q9NW81 257 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 PRO0628Q9UI54 55 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 NRKQ7Z2Y5 1582 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 MEGF6O75095 1541 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 MYO5BQ9ULV0 1848 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 PHLPP1O60346 1717 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 KNDC1Q76NI1 1749 aa3.02□□□□□ -1.93
VPS13D-207ENST00000476169 BLMP54132 1417 aaPredicted RBP3.02□□□□□ -1.93
VPS13D-207ENST00000476169 RAI1Q7Z5J4 1906 aaPredicted RBP3.01□□□□□ -1.93
VPS13D-207ENST00000476169 ASTN1O14525 1302 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 TRAV8-2A0A0B4J237 113 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 A0A1W2PQL4 384 aaPredicted RBP3.01□□□□□ -1.93
VPS13D-207ENST00000476169 PLAC8L1A1L4L8 177 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 EPOPA6NHQ4 379 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 C21orf140B9A014 251 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 DNASE2O00115 360 aaPredicted RBP3.01□□□□□ -1.93
VPS13D-207ENST00000476169 CA11O75493 328 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 C8orf88P0DMB2 117 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 PSMA1P25786 263 aaKnown RBP3.01□□□□□ -1.93
VPS13D-207ENST00000476169 PYCR1P32322 319 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 CRADDP78560 199 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 DR1Q01658 176 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 IRF4Q15306 451 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 LPAL2Q16609 132 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 CEMP1Q6PRD7 247 aaPredicted RBP3.01□□□□□ -1.93
VPS13D-207ENST00000476169 FAM183BPQ6ZVS7 135 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 CPNE9Q8IYJ1 553 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.01□□□□□ -1.93
VPS13D-207ENST00000476169 DCAF4L2Q8NA75 395 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 OR4P4Q8NGL7 312 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 OR5M1Q8NGP8 315 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 OR1J4Q8NGS1 313 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 FAM222BQ8WU58 562 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 CYGBQ8WWM9 190 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 RDH5Q92781 318 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 SNF8Q96H20 258 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 KCNS1Q96KK3 526 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 WFIKKN1Q96NZ8 548 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 SPACA5Q96QH8 159 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 DHRS9Q9BPW9 319 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 SLC25A39Q9BZJ4 359 aaPredicted RBP3.01□□□□□ -1.93
VPS13D-207ENST00000476169 CDC42EP4Q9H3Q1 356 aaKnown RBP3.01□□□□□ -1.93
VPS13D-207ENST00000476169 VNN3Q9NY84 501 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 TMEM9Q9P0T7 183 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 ZNF225Q9UK10 706 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 SLC22A13Q9Y226 551 aa3.01□□□□□ -1.93
VPS13D-207ENST00000476169 TRPM3Q9HCF6 1732 aaPredicted RBP3□□□□□ -1.93
VPS13D-207ENST00000476169 IGKV1-27A0A075B6S5 117 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3□□□□□ -1.93
VPS13D-207ENST00000476169 UPK2O00526 184 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 SPAG7O75391 227 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 CGAP01215 116 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 MRPL3P09001 348 aaKnown RBP3□□□□□ -1.93
VPS13D-207ENST00000476169 GIG44P09565 113 aaPredicted RBP3□□□□□ -1.93
VPS13D-207ENST00000476169 M6PRP20645 277 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 IDH2P48735 452 aaKnown RBP3□□□□□ -1.93
VPS13D-207ENST00000476169 TCL1AP56279 114 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 NUP107P57740 925 aa3□□□□□ -1.93
VPS13D-207ENST00000476169 GRB2P62993 217 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms