RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 RBFOX1Q9NWB1 397 aaKnown RBP4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 COPS3Q9UNS2 423 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 SLC7A11Q9UPY5 501 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 ZNF256Q9Y2P7 627 aaPredicted RBP4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 SMAD5-AS1Q9Y6J3 95 aa4.02□□□□□ -1.77
SNRNP40-204ENST00000474025 A0A087X0M5 115 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 TRGV10A0A0A0MS01 117 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 TRBV2A0A0J9YWF9 115 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 A0A1B0GX30 115 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 A0A1W2PPI3 338 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 CCDC182A6NF36 153 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 LINC01548A6NM66 108 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 CCRL2O00421 344 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 TOR1AO14656 332 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 ENTPD6O75354 484 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 INMTO95050 263 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 HCKP08631 526 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 MRPL3P09001 348 aaKnown RBP4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 TMEM11P17152 192 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 ATP6V1B2P21281 511 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 CCL1P22362 96 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 DUSP1P28562 367 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 PRDX6P30041 224 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 PTGFRP43088 359 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 CDX1P47902 265 aaPredicted RBP4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 GLIPR1P48060 266 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 NPBWR2P48146 333 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 RPS7P62081 194 aaKnown RBP4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 CBX1P83916 185 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 FOXE3Q13461 319 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 RBM39Q14498 530 aaKnown RBP4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 GINS1Q14691 196 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 ZNF260Q3ZCT1 412 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 CXorf66Q5JRM2 361 aaPredicted RBP4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 OR2T5Q6IEZ7 315 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 TEX38Q6PEX7 206 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 CYP2R1Q6VVX0 501 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 ADAMTSL5Q6ZMM2 481 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 PLEKHG7Q6ZR37 379 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 SLC25A26Q70HW3 274 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 OVCH2Q7RTZ1 564 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 HDXQ7Z353 690 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 FOXRED2Q8IWF2 684 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 Q8IYB0 196 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 ENTHD1Q8IYW4 607 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 ELMOD2Q8IZ81 293 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 PGAM4Q8N0Y7 254 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 DRAM1Q8N682 238 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 OR2T29Q8NH02 315 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 ASB17Q8WXJ9 295 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 TOMM40LQ969M1 308 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 RPEQ96AT9 228 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 COQ2Q96H96 371 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 CLUHP3Q96NS8 147 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 FEVQ99581 238 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 CHST5Q9GZS9 411 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 MAGIXQ9H6Y5 334 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 ZMAT4Q9H898 229 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 REEP1Q9H902 201 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 TAS2R3Q9NYW6 316 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 GLS2Q9UI32 602 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 ADAM30Q9UKF2 790 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 OR52A1Q9UKL2 312 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 IKZF2Q9UKS7 526 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 GTF2A1LQ9UNN4 478 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 TMEM14AQ9Y6G1 99 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 R4GMQ9 66 aa4.01□□□□□ -1.77
SNRNP40-204ENST00000474025 DYNC1H1Q14204 4646 aaKnown RBP4□□□□□ -1.77
SNRNP40-204ENST00000474025 KRTAP4-8A0A0G2JLE6 195 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 TCRBV5S2A0A599 114 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 ODAMA1E959 279 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 H3BSH0 61 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 AP4M1O00189 453 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 SIRPB1O00241 398 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 MAGEB4O15481 346 aaPredicted RBP4□□□□□ -1.77
SNRNP40-204ENST00000474025 GATBO75879 557 aaKnown RBP4□□□□□ -1.77
SNRNP40-204ENST00000474025 LY86O95711 162 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 OR2H2O95918 312 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 SCGB1D2O95969 90 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 IGKV1D-33P01593 117 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 IGKV1-33P01594 117 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 HMGN1P05114 100 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 CSN2P05814 226 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 FRMD6-AS1P0C7T7 363 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 CALCBP10092 127 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 PRKACAP17612 351 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 BCL3P20749 454 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 GPR12P47775 334 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 INSL3P51460 131 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 FUT6P51993 359 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 PRRX1P54821 245 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 SNU13P55769 128 aaKnown RBP4□□□□□ -1.77
SNRNP40-204ENST00000474025 CDC42P60953 191 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 CXCR4P61073 352 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 CDK5Q00535 292 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 CFHR3Q02985 330 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 AESQ08117 197 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 MADCAM1Q13477 382 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 GPR50Q13585 617 aa4□□□□□ -1.77
SNRNP40-204ENST00000474025 DIAPH2-AS1Q14236 149 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms