RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 J3QLW9 94 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 TOR1AO14656 332 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 OR2F2O95006 317 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 ZNF19P17023 458 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 LMO1P25800 156 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 RBM39Q14498 530 aaKnown RBP16.81■□□□□ 0.28
COL9A3-207ENST00000467819 ATXN7L3Q14CW9 347 aaPredicted RBP16.81■□□□□ 0.28
COL9A3-207ENST00000467819 HLA-DRB5Q30154 266 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 KHDC1LQ5JSQ8 128 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 KRBOX4Q5JUW0 171 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 WFDC9Q8NEX5 89 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 OR4D6Q8NGJ1 314 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 MYDGFQ969H8 173 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 COQ2Q96H96 371 aa16.81■□□□□ 0.28
COL9A3-207ENST00000467819 RBM14Q96PK6 669 aaKnown RBP16.81■□□□□ 0.28
COL9A3-207ENST00000467819 TSSC4Q9Y5U2 329 aaPredicted RBP16.81■□□□□ 0.28
COL9A3-207ENST00000467819 J3QRE1 110 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 MPIG6BO95866 241 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 MT-ND2P03891 347 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 CD34P28906 385 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 CEACAM3P40198 252 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 OR3A4PP47883 348 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 CCR9P51686 369 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 C9orf152Q5JTZ5 239 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 TPTE2P1Q5T6R2 138 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 Q6P435 159 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 C10orf99Q6UWK7 81 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 OR4X2Q8NGF9 303 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 TRUB1Q8WWH5 349 aaKnown RBP16.8■□□□□ 0.28
COL9A3-207ENST00000467819 PELI1Q96FA3 418 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 C4orf36Q96KX1 117 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.8■□□□□ 0.28
COL9A3-207ENST00000467819 ZNF281Q9Y2X9 895 aa16.8■□□□□ 0.28
COL9A3-207ENST00000467819 OR4C45A6NMZ5 311 aa16.79■□□□□ 0.28
COL9A3-207ENST00000467819 BUB1B-PAK6H3BSN5 160 aa16.79■□□□□ 0.28
COL9A3-207ENST00000467819 SLC33A1O00400 549 aaPredicted RBP16.79■□□□□ 0.28
COL9A3-207ENST00000467819 CSN2P05814 226 aa16.79■□□□□ 0.28
COL9A3-207ENST00000467819 NFYBP25208 207 aa16.79■□□□□ 0.28
COL9A3-207ENST00000467819 UTF1Q5T230 341 aa16.79■□□□□ 0.28
COL9A3-207ENST00000467819 ACBD7Q8N6N7 88 aa16.79■□□□□ 0.28
COL9A3-207ENST00000467819 PPIL3Q9H2H8 161 aaKnown RBP16.79■□□□□ 0.28
COL9A3-207ENST00000467819 ZCCHC4Q9H5U6 513 aa16.79■□□□□ 0.28
COL9A3-207ENST00000467819 ORC6Q9Y5N6 252 aa16.79■□□□□ 0.28
COL9A3-207ENST00000467819 HSPB6O14558 160 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 DYNC1I1O14576 645 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 DEGS1O15121 323 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 AMY1AP04745 511 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 AMY2AP04746 511 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 HCKP08631 526 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 TMEM225BP0DP42 221 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 PRRX1P54821 245 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 SLC35A2P78381 396 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 ALKBH1Q13686 389 aaKnown RBP16.78■□□□□ 0.28
COL9A3-207ENST00000467819 C17orf58Q2M2W7 97 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 ZIK1Q3SY52 487 aaPredicted RBP16.78■□□□□ 0.28
COL9A3-207ENST00000467819 SAXO1Q8IYX7 474 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 CHST4Q8NCG5 386 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 CREB3L1Q96BA8 519 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 HRASLS5Q96KN8 279 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 RHOFQ9HBH0 211 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 AASSQ9UDR5 926 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 MYRFQ9Y2G1 1151 aa16.78■□□□□ 0.28
COL9A3-207ENST00000467819 ZNF729A6NN14 1252 aaPredicted RBP16.77■□□□□ 0.28
COL9A3-207ENST00000467819 CIB2O75838 187 aa16.77■□□□□ 0.28
COL9A3-207ENST00000467819 ALPLP05186 524 aa16.77■□□□□ 0.28
COL9A3-207ENST00000467819 MNDAP41218 407 aa16.77■□□□□ 0.28
COL9A3-207ENST00000467819 GLP1RP43220 463 aa16.77■□□□□ 0.28
COL9A3-207ENST00000467819 SNRPGP62308 76 aaKnown RBP16.77■□□□□ 0.28
COL9A3-207ENST00000467819 CDK5R1Q15078 307 aa16.77■□□□□ 0.28
COL9A3-207ENST00000467819 MEDAGQ5VYS4 303 aa16.77■□□□□ 0.28
COL9A3-207ENST00000467819 CCDC144NLQ6NUI1 221 aa16.77■□□□□ 0.28
COL9A3-207ENST00000467819 PYDC1Q8WXC3 89 aa16.77■□□□□ 0.28
COL9A3-207ENST00000467819 NR1H4Q96RI1 486 aaPredicted RBP16.77■□□□□ 0.28
COL9A3-207ENST00000467819 OR6C3Q9NZP0 311 aa16.77■□□□□ 0.28
COL9A3-207ENST00000467819 LY6LH3BQJ8 138 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 EI24O14681 340 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 ATP5HO75947 161 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 ZP1P60852 638 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 KISS1Q15726 138 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 SLC25A30Q5SVS4 291 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 LPCAT4Q643R3 524 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 LHFPL3Q86UP9 236 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 LGALS12Q96DT0 336 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 KIRREL1Q96J84 757 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 ALG8Q9BVK2 526 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 FAM53CQ9NYF3 392 aa16.76■□□□□ 0.27
COL9A3-207ENST00000467819 EXOGQ9Y2C4 368 aaKnown RBP16.76■□□□□ 0.27
COL9A3-207ENST00000467819 A0A087X0M5 115 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 A0A1B0GX30 115 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 H0YJX3 145 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 SULT1B1O43704 296 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 IGHV3-7P01780 117 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 OR5D14Q8NGL3 314 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 OR9G1Q8NH87 305 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 LEAP2Q969E1 77 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 TOMM40LQ969M1 308 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 RPEQ96AT9 228 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 MRPL48Q96GC5 212 aaKnown RBP16.75■□□□□ 0.27
COL9A3-207ENST00000467819 ISG20L2Q9H9L3 353 aaKnown RBP16.75■□□□□ 0.27
COL9A3-207ENST00000467819 KIF25Q9UIL4 384 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms