RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 DEDDO75618 318 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 MLF1P58340 268 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 GAPTQ8N292 157 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 GFI1Q99684 422 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 ANGPTL4Q9BY76 406 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 TRGV5A0A0B4J1U4 118 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 A0A1W2PPH5 198 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 FGF7P21781 194 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 DYNLT3P51808 116 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 C4orf17Q53FE4 359 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 FNDC7Q5VTL7 733 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 HPSE2Q8WWQ2 592 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 CORO2AQ92828 525 aa14.54□□□□□ -0.08
TCOF1-206ENST00000445265 DUXBA0A1W2PPF3 345 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 SCGB2A1O75556 95 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 IL2RAP01589 272 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 OR2I1PQ8NGU4 316 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 TRIB1Q96RU8 372 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 ATP5SQ99766 215 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 PLA2G3Q9NZ20 509 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 NKX2-6A6NCS4 301 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 CCL2P13500 99 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 IGFBP3P17936 291 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-206ENST00000445265 CEACAM6P40199 344 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 SLC38A11Q08AI6 406 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 UNC119Q13432 240 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 NECAP1Q8NC96 275 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 SMDT1Q9H4I9 107 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-206ENST00000445265 RPL36A-HNRNPH2H7BZ11 118 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 AP4M1O00189 453 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 CHST1O43916 411 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 CASP6P55212 293 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 RBM11P57052 281 aaKnown RBP14.53□□□□□ -0.08
TCOF1-206ENST00000445265 PMP22Q01453 160 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 ZNF816Q0VGE8 651 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-206ENST00000445265 OR10C1Q96KK4 312 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 MAP1LC3B2A6NCE7 125 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 DHRS7CA6NNS2 312 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 SPP1P10451 314 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 ISOC2Q96AB3 205 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 MAP1LC3BQ9GZQ8 125 aa14.53□□□□□ -0.08
TCOF1-206ENST00000445265 CD200P41217 278 aa14.52□□□□□ -0.08
TCOF1-206ENST00000445265 HLA-DRB3P79483 266 aa14.52□□□□□ -0.08
TCOF1-206ENST00000445265 PNRC1Q12796 327 aaPredicted RBP14.52□□□□□ -0.08
TCOF1-206ENST00000445265 HSF4Q9ULV5 492 aa14.52□□□□□ -0.08
TCOF1-206ENST00000445265 MPTX1A8MV57 137 aa14.52□□□□□ -0.08
TCOF1-206ENST00000445265 SYNGR2O43760 224 aa14.52□□□□□ -0.08
TCOF1-206ENST00000445265 TNFSF15O95150 251 aa14.52□□□□□ -0.08
TCOF1-206ENST00000445265 LY86O95711 162 aa14.52□□□□□ -0.08
TCOF1-206ENST00000445265 ARG1P05089 322 aa14.52□□□□□ -0.08
TCOF1-206ENST00000445265 FABP6P51161 128 aa14.52□□□□□ -0.08
TCOF1-206ENST00000445265 RPS23P62266 143 aaKnown RBP14.52□□□□□ -0.08
TCOF1-206ENST00000445265 SLC7A10Q9NS82 523 aa14.52□□□□□ -0.08
TCOF1-206ENST00000445265 LIPGQ9Y5X9 500 aa14.52□□□□□ -0.08
TCOF1-206ENST00000445265 CDK2AP1O14519 115 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 F12P00748 615 aaPredicted RBP14.52□□□□□ -0.09
TCOF1-206ENST00000445265 RAB5AP20339 215 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 LPAR6P43657 344 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 SULT1A1P50225 295 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 NUFIP2Q7Z417 695 aaKnown RBP14.52□□□□□ -0.09
TCOF1-206ENST00000445265 UBALD1Q8TB05 177 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 A0A1W2PPQ1 181 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 ZNF98A6NK75 572 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 F6UZH7 168 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 ZNF528Q3MIS6 628 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 BAGE3Q86Y29 109 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 BAGE2Q86Y30 109 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 UBAC2Q8NBM4 344 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 OR5A2Q8NGI9 324 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 ABHD5Q8WTS1 349 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 FSCN3Q9NQT6 498 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 CCL28Q9NRJ3 127 aa14.52□□□□□ -0.09
TCOF1-206ENST00000445265 CDRT15L2A8MXV6 281 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 SIGLEC5O15389 551 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 SIGLEC14Q08ET2 396 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 ABHD3Q8WU67 409 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 DYRK2Q92630 601 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 CRYM-AS1A6NIL9 109 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 FABP1P07148 127 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 SMIM6P0DI80 62 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 BCL3P20749 454 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 PLGLAQ15195 96 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 SSX2Q16385 188 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 CISD2Q8N5K1 135 aaKnown RBP14.51□□□□□ -0.09
TCOF1-206ENST00000445265 APCDD1LQ8NCL9 501 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 TLNRD1Q9H1K6 362 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 LINC00271P0C7V0 271 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 S1PR3Q99500 378 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 KIF26BQ2KJY2 2108 aa14.51□□□□□ -0.09
TCOF1-206ENST00000445265 HKR1P10072 659 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 DAOP14920 347 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 CT55Q8WUE5 264 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 ARRDC1-AS1Q9H2J1 176 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 HEXA-AS1Q9H8Q6 139 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 PROCRQ9UNN8 238 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 A0A087WV48 116 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 NKX6-3A6NJ46 265 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 CRYAAP02489 173 aa14.5□□□□□ -0.09
TCOF1-206ENST00000445265 OR2A2Q6IF42 318 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms