RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ATXN7L3Q14CW9 347 aaPredicted RBP17.62■□□□□ 0.41
USP39-203ENST00000409470 IGSF11Q5DX21 431 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 ALKBH2Q6NS38 261 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 Q6ZS49 121 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 OR5T2Q8NGG2 359 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 FAM57AQ8TBR7 257 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 RDH5Q92781 318 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 NMES1Q9C002 83 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 TMEM165Q9HC07 324 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 TINAGQ9UJW2 476 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 APC2O95996 2303 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 CRYM-AS1A6NIL9 109 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 H0YL77 283 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 DEGS1O15121 323 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 ZNF44P15621 663 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 TUBG1P23258 451 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 ZNF154Q13106 437 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 SRSF7Q16629 238 aaKnown RBP eCLIP17.62■□□□□ 0.41
USP39-203ENST00000409470 Q8IYB0 196 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 OR8G5Q8NG78 346 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 TUBG2Q9NRH3 451 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 C1orf123Q9NWV4 160 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 WASF3Q9UPY6 502 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 SLC25A15Q9Y619 301 aa17.62■□□□□ 0.41
USP39-203ENST00000409470 CUL9Q8IWT3 2517 aa17.61■□□□□ 0.41
USP39-203ENST00000409470 IGHV2OR16-5A0A0B4J2B6 119 aa17.61■□□□□ 0.41
USP39-203ENST00000409470 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.61■□□□□ 0.41
USP39-203ENST00000409470 CDIPTO14735 213 aa17.61■□□□□ 0.41
USP39-203ENST00000409470 TIMM8AO60220 97 aaPredicted RBP17.61■□□□□ 0.41
USP39-203ENST00000409470 PSMB6P28072 239 aa17.61■□□□□ 0.41
USP39-203ENST00000409470 RBM39Q14498 530 aaKnown RBP17.61■□□□□ 0.41
USP39-203ENST00000409470 ZNF474Q6S9Z5 364 aaPredicted RBP17.61■□□□□ 0.41
USP39-203ENST00000409470 MOB3AQ96BX8 217 aa17.61■□□□□ 0.41
USP39-203ENST00000409470 FZR1Q9UM11 496 aa17.61■□□□□ 0.41
USP39-203ENST00000409470 TNFSF18Q9UNG2 199 aa17.61■□□□□ 0.41
USP39-203ENST00000409470 TRAV24A0A0B4J272 114 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 TMEM210A6NLX4 147 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 SLC34A2O95436 690 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 HOXB5P09067 269 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 AADACP22760 399 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 GCH1P30793 250 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 FABP6P51161 128 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 ZNF718Q3SXZ3 478 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 C6orf183Q5T699 404 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 PIK3IP1Q96FE7 263 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 RIMS4Q9H426 269 aaPredicted RBP17.6■□□□□ 0.41
USP39-203ENST00000409470 A0A0D9SG52 128 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 KIR2DS1A0A191URI9 304 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 KIR2DS4P43632 304 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 KIR2DS1Q14954 304 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 PHLDA2Q53GA4 152 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 SLC38A6Q8IZM9 456 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 FAM169BQ8N8A8 192 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 S100PBPQ96BU1 408 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 SFXN3Q9BWM7 321 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 KCNIP3Q9Y2W7 256 aa17.6■□□□□ 0.41
USP39-203ENST00000409470 MPTX1A8MV57 137 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 BET1O15155 118 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 NXPH2O95156 264 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 GLAP06280 429 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 SCTP09683 121 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 RAB14P61106 215 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 NHLH1Q02575 133 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 TBR1Q16650 682 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 RTN4IP1Q8WWV3 396 aaPredicted RBP17.59■□□□□ 0.41
USP39-203ENST00000409470 GTF3AQ92664 365 aaKnown RBP17.59■□□□□ 0.41
USP39-203ENST00000409470 IFT22Q9H7X7 185 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 MBD2Q9UBB5 411 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 PRR14LQ5THK1 2151 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 TRDCB7Z8K6 153 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 GFRA3O60609 400 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 PPYP01298 95 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 TK1P04183 234 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 HOXD4P09016 255 aaPredicted RBP17.59■□□□□ 0.41
USP39-203ENST00000409470 PGA5P0DJD9 388 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 ZNF83P51522 516 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 UCP3P55916 312 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 TIMM23BQ5SRD1 257 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 ZNF324BQ6AW86 544 aaPredicted RBP17.59■□□□□ 0.41
USP39-203ENST00000409470 CISD2Q8N5K1 135 aaKnown RBP17.59■□□□□ 0.41
USP39-203ENST00000409470 MRPL30Q8TCC3 161 aaKnown RBP17.59■□□□□ 0.41
USP39-203ENST00000409470 NRIP2Q9BQI9 281 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 NAA60Q9H7X0 242 aa17.59■□□□□ 0.41
USP39-203ENST00000409470 ANKRD11Q6UB99 2663 aaPredicted RBP17.58■□□□□ 0.4
USP39-203ENST00000409470 MLNRO43193 412 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 OR2F2O95006 317 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 DIRAS3O95661 229 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 KITLGP21583 273 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 ERVK11-1P61568 191 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 OR2F1Q13607 317 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 Q6P435 159 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 C5orf24Q7Z6I8 188 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 INO80EQ8NBZ0 244 aaPredicted RBP17.58■□□□□ 0.4
USP39-203ENST00000409470 OR10C1Q96KK4 312 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 C2orf50Q96LR7 162 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 VRK1Q99986 396 aaPredicted RBP17.58■□□□□ 0.4
USP39-203ENST00000409470 SYT3Q9BQG1 590 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 CXXC4Q9H2H0 198 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 SLC2A9Q9NRM0 540 aa17.58■□□□□ 0.4
USP39-203ENST00000409470 ATP23Q9Y6H3 246 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms