RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 HSD17B12Q53GQ0 312 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 SPIN3Q5JUX0 258 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 UBE2UQ5VVX9 321 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 ZNF773Q6PK81 442 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 GLIPR1L1Q6UWM5 242 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 TMEM91Q6ZNR0 172 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 C17orf107Q6ZR85 190 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 TCF23Q7RTU1 214 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 LRRTM1Q86UE6 522 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 BCL6BQ8N143 479 aaPredicted RBP6.87□□□□□ -1.31
BRCC3-205ENST00000399026 MS4A15Q8N5U1 240 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 NKAIN3Q8N8D7 197 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 ZSCAN4Q8NAM6 433 aaPredicted RBP6.87□□□□□ -1.31
BRCC3-205ENST00000399026 LY6G5BQ8NDX9 201 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 PXT1Q8NFP0 134 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 OR4S1Q8NGB4 309 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 OR4D6Q8NGJ1 314 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 C8orf46Q8TAG6 207 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 LHX4Q969G2 390 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 CYYR1Q96J86 154 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 WDFY2Q96P53 400 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 PPA2Q9H2U2 334 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 CNTD2Q9H8S5 307 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 TCF7L1Q9HCS4 588 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 ISYNA1Q9NPH2 558 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 NDUFB11Q9NX14 153 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 ZNF69Q9UC07 566 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 SF3B6Q9Y3B4 125 aaKnown RBP6.87□□□□□ -1.31
BRCC3-205ENST00000399026 DSCAML1Q8TD84 2053 aa6.87□□□□□ -1.31
BRCC3-205ENST00000399026 TRBV23-1A0A0A0MS06 115 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 A0A1W2PRD5 423 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 A0A1W2PRF3 423 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 A0A1W2PRM7 423 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 K7N7A8 449 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 SLC33A1O00400 549 aaPredicted RBP6.86□□□□□ -1.31
BRCC3-205ENST00000399026 MRPS14O60783 128 aaKnown RBP6.86□□□□□ -1.31
BRCC3-205ENST00000399026 CHRM2P08172 466 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 CALRP27797 417 aaKnown RBP6.86□□□□□ -1.31
BRCC3-205ENST00000399026 GABRA5P31644 462 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 RBM11P57052 281 aaKnown RBP6.86□□□□□ -1.31
BRCC3-205ENST00000399026 RPL31P62899 125 aaKnown RBP6.86□□□□□ -1.31
BRCC3-205ENST00000399026 GPR50Q13585 617 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 GPR157Q5UAW9 335 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 Q6P435 159 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 UNQ9370/PRO34162Q6UXP9 181 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 ZNF782Q6ZMW2 699 aaPredicted RBP6.86□□□□□ -1.31
BRCC3-205ENST00000399026 GDPD3Q7L5L3 318 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 CMTM4Q8IZR5 234 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 OR8H2Q8N162 312 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 PNKDQ8N490 385 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 BPIFB2Q8N4F0 458 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 TEX29Q8N6K0 151 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 KIR3DL3Q8N743 410 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 Q8N7P7 452 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 THRSPQ92748 146 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 FAM46BQ96A09 425 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 SNX22Q96L94 193 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 S100A13Q99584 98 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 GFI1Q99684 422 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 YTHDF1Q9BYJ9 559 aaKnown RBP6.86□□□□□ -1.31
BRCC3-205ENST00000399026 FAM234AQ9H0X4 552 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 METTL9Q9H1A3 318 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 GLS2Q9UI32 602 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 NUP50Q9UKX7 468 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 KPTNQ9Y664 436 aa6.86□□□□□ -1.31
BRCC3-205ENST00000399026 TRAV24A0A0B4J272 114 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 CENPVL3A0A0U1RRI6 287 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 SMIM30A4D0T7 59 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 CCRL2O00421 344 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 SH2D1BO14796 132 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 GEMIN2O14893 280 aaKnown RBP6.85□□□□□ -1.31
BRCC3-205ENST00000399026 CRTAPO75718 401 aaPredicted RBP6.85□□□□□ -1.31
BRCC3-205ENST00000399026 IFNA2P01563 188 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 CSTBP04080 98 aaKnown RBP6.85□□□□□ -1.31
BRCC3-205ENST00000399026 PSMA1P25786 263 aaKnown RBP6.85□□□□□ -1.31
BRCC3-205ENST00000399026 ERVFRD-1P60508 538 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 IL13RA2Q14627 380 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 P2RY14Q15391 338 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 TRAM1Q15629 374 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 PAN3Q58A45 887 aaKnown RBP6.85□□□□□ -1.31
BRCC3-205ENST00000399026 ELP2Q6IA86 826 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 ASCL4Q6XD76 172 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 TRAPPC6BQ86SZ2 158 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 LYPD6Q86Y78 171 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 OSR2Q8N2R0 312 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 SIGLECL1Q8N7X8 197 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 OR51T1Q8NGJ9 327 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 PHYHIPQ92561 330 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 FCGR1BQ92637 280 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 COQ2Q96H96 371 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 C1orf147Q96MC9 270 aaPredicted RBP6.85□□□□□ -1.31
BRCC3-205ENST00000399026 ZNF48Q96MX3 618 aaPredicted RBP6.85□□□□□ -1.31
BRCC3-205ENST00000399026 DUX5Q96PT3 197 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 MS4A7Q9GZW8 240 aaPredicted RBP6.85□□□□□ -1.31
BRCC3-205ENST00000399026 BANF2Q9H503 90 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 IL36GQ9NZH8 169 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 ST3GAL6Q9Y274 331 aa6.85□□□□□ -1.31
BRCC3-205ENST00000399026 AK6Q9Y3D8 172 aaKnown RBP6.85□□□□□ -1.31
BRCC3-205ENST00000399026 IGHV1-69DA0A0B4J2H0 117 aa6.84□□□□□ -1.31
BRCC3-205ENST00000399026 A0A0G2JK05 382 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms